CF834069

Overview
NameCF834069
Unique NameCF834069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.487e-66
Identity = 117/191 (61.26%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT++AIGTA P NC+ Q+ YPDYYFR TNS+H T L++KFKR+CEKS +KKRY H+T+ IL++NP++C Y   SLD+RQ I+V EVPKLG+EAA+KAIKEWGQ KS+ITHL+FC+  G+ MP  DY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGP+D H
Sbjct:   15 GPATVMAIGTATPTNCVDQSTYPDYYFRITNSEHKTDLKEKFKRMCEKSMIKKRYMHLTEEILKENPSMCEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGCDYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 251.906 bits (642), Expect = 1.942e-66
Identity = 118/191 (61.78%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATI+AIGTA P NC+ Q+ YPDYYFR TNS+H T L++KF+R+C+KS +KKRY H+T+ IL++NPNIC Y   SLD+RQ I+V EVPKLG+EAA+KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTK+L L  SVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGP+D H
Sbjct:   15 GPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPNDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS1_CAMSI (Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 1.942e-66
Identity = 117/201 (58.21%), Postives = 154/201 (76.62%), Query Frame = 1
Query:   22 KDGKNQLQGGGLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            +D +   +  G AT++AIGTA PPNC+ Q+ YPDYYFR TNS+H   L++KFKR+C+KS +KKRY ++T+ IL++NP +C Y   SLD+RQ ++V EVPKLG+EAA KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPSD H
Sbjct:    5 EDIRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMCDKSMIKKRYMYLTEEILKENPQVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSY_RAPSA (Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.537e-66
Identity = 118/191 (61.78%), Postives = 152/191 (79.58%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G A ILAIGTANP N + QA+YPDYYFR TNS+H+T L++KFKR+C+KS ++KR+ H+T+  L++NPN+CAY   SLD+RQ I+V EVPKLG+EAA KAIKEWGQ KS+ITH++FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPSD H
Sbjct:   19 GPAGILAIGTANPANHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTH 209          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSY_PERFR (Chalcone synthase OS=Perilla frutescens GN=CHS PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.537e-66
Identity = 119/201 (59.20%), Postives = 155/201 (77.11%), Query Frame = 1
Query:   22 KDGKNQLQGGGLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            +D +   +  G AT++AIGTA P NC+ Q+ YPDYYFR TNS+H T L++KFKR+CEKS ++KRY H+T+  L++NPN+ AY   SLD+RQ I+V EVPKLG+EAA+KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTK+L L PSVKR M+Y QGC+   T +RM KD AENN   RVL +CS+++  TFRGPS++H
Sbjct:    5 EDIRRAQRAEGPATVMAIGTATPENCVDQSTYPDYYFRITNSEHRTDLKEKFKRMCEKSMIRKRYMHLTEEFLKENPNMTAYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRMAKDLAENNAGARVLVVCSEITAVTFRGPSESH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.537e-66
Identity = 116/191 (60.73%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT++AIGTA PPNC+ QA YPDYYFR TNS+H   L++KF+R+C+KS +KKRY ++ + +L++NPN+CAY   SLD+RQ I+V EVPKLG+EAA KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGP+D H
Sbjct:   15 GPATVMAIGTAVPPNCVDQATYPDYYFRITNSEHKAELKEKFQRMCDKSQIKKRYMYLNEEVLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPTDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.537e-66
Identity = 118/191 (61.78%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G A IL IGTANPPN + QA+YPDYYFR TNSDH+T L++KFKR+C+KS ++KR+ H+T+  L++NP +CAY   SLD+RQ I+V EVPKLG+EAA KAIKEWGQ KS+ITH++FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPSD H
Sbjct:   16 GPAGILGIGTANPPNHVLQAEYPDYYFRITNSDHMTDLKEKFKRMCDKSMIRKRHMHLTEEFLKENPKMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNRGARVLVVCSEITAVTFRGPSDTH 206          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.537e-66
Identity = 118/191 (61.78%), Postives = 150/191 (78.53%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G A +LAIGT+ PPN LYQADYPDYYFR T S+H+T L++KFKR+C+KS +KKRY ++T+ IL++NPNICA+   SLD+RQ I+V EVPKL +EAA +AIKEWG  KS+ITHLIFC+  GI MP ADY LT++L L PSV R MLY QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPS++H
Sbjct:   16 GPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAARAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITAVTFRGPSESH 206          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 2.537e-66
Identity = 116/191 (60.73%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT+LAIGTA P NC+YQADYPDYYFR T S+H+T L++KFKR+C+KS ++KRY H+T+  L +NP++CAY   SLD+RQ ++V EVPKLG+ AA+KAIKEWGQ KS+ITHL+FC+  G+ MP ADY LTK L L PSV R+M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPS++H
Sbjct:   19 GPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYMHLTEEFLAENPSMCAYMAPSLDARQDVVVVEVPKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTFRGPSESH 209          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 3.313e-66
Identity = 117/190 (61.58%), Postives = 152/190 (80.00%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDA 621
            G ATILAIGTA PPN +YQADYPDYYFR T S+H+T L++KF+R+C+KS +KKRY ++T+ IL++NPN+C Y GSSLD+RQ ++V EVP+LG+EAA KAIKEWGQ KS+ITH+I C+  G+ MP ADY LTK+L L PSV+R MLY QGC+   T +R+ KD AENN   RVL +CS+++   FRGP++A
Sbjct:   15 GPATILAIGTATPPNAIYQADYPDYYFRVTKSEHMTELKEKFRRMCDKSMIKKRYMYLTEEILKENPNLCEYMGSSLDTRQDMVVSEVPRLGKEAAVKAIKEWGQPKSKITHVIMCTTSGVDMPGADYQLTKLLGLRPSVRRFMLYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAICFRGPTEA 204          
The following BLAST results are available for this feature:
BLAST of CF834069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHSA_PETHY1.487e-6661.26Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHSJ_PETHY1.942e-6661.78Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHS1_CAMSI1.942e-6658.21Chalcone synthase 1 OS=Camellia sinensis GN=CHS1 P... [more]
CHSY_RAPSA2.537e-6661.78Chalcone synthase OS=Raphanus sativus GN=CHS PE=2 ... [more]
CHSY_PERFR2.537e-6659.20Chalcone synthase OS=Perilla frutescens GN=CHS PE=... [more]
CHSY_HYPAN2.537e-6660.73Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSY_ARAAL2.537e-6661.78Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]
CHS8_BROFI2.537e-6661.78Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS2_MAIZE2.537e-6660.73Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_DIAMO3.313e-6661.58Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834069 ID=CF834069; Name=CF834069; organism=Citrus sinensis; type=EST; length=625bp
TAATATATAATGGAGAAAGATAAAGATGGGAAGAACCAACTGCAAGGAGG
AGGGTTAGCCACGATCCTAGCCATCGGAACTGCAAATCCACCTAACTGCT
TATACCAAGCTGACTACCCTGATTATTACTTCCGTGACACCAACAGTGAC
CACGTGACTCTCCTCGAACAAAAATTCAAACGCATCTGCGAGAAATCAAA
TGTAAAGAAACGCTACTTCCATGTTACCCAATATATTCTCAGAAAGAACC
CGAATATATGTGCCTACGACGGCTCCTCCCTCGATAGCCGTCAATATATA
TTGGTTAGGGAAGTACCGAAACTTGGCGAGGAAGCGGCAAAAAAAGCAAT
CAAAGAATGGGGCCAATCAAAATCCCAGATCACGCATCTCATTTTCTGCT
CACTTGTGGGCATATACATGCCCAGGGCTGACTATCTGCTGACCAAAATG
TTGCGCCTCAACCCATCTGTCAAACGAGTCATGCTATACTTTCAAGGCTG
TTACATTGTCGCCACAGCCATCCGAATGGGCAAGGACTTTGCTGAAAACA
ACCCTGATACCCGCGTTCTATACATATGCTCTGACTTATCCCTTGGTACT
TTCCGTGGACCTTCTGATGCCCACT
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