CF834069

Overview
NameCF834069
Unique NameCF834069
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS6_IPOBA (Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DII PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 6.249e-65
Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGTA P NC+ Q+ YPDYYFR TNS+H T L++KF+R+C+KS + KRY H+T+ IL++NP+ C Y   SLD+RQ I V EVPKLG+EAA+ AIKEWGQ KS+ITH++FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS++++ TFRGPS+ H
Sbjct:   15 GPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.392e-64
Identity = 115/191 (60.21%), Postives = 147/191 (76.96%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G AT+ AIGTA P NC+ Q+ YPD+YFR TNS H T L++KF+R+C+KS +KKRY H+T+ IL++NP++C Y   SLD+RQ ++V EVPKLG+EAA KAIKEWGQ KS+ITHLIFC+  G+ MP ADY LTK+L L P VKR M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPSD H
Sbjct:   15 GPATVFAIGTATPQNCVEQSTYPDFYFRITNSQHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSLCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.392e-64
Identity = 115/191 (60.21%), Postives = 148/191 (77.49%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGT  P NC+ Q+ YPDYYFR TNS+H T L++KF+R+C+KS + KRY H+T+ IL++NP+ C Y   SLD+RQ I V EVPKLG+EAA+ AIKEWGQ KS+ITH++FC+  GI MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS++++ TFRGPS+ H
Sbjct:   15 GPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.392e-64
Identity = 115/191 (60.21%), Postives = 148/191 (77.49%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGTA P NC+ Q+ YPDYYFR TNS+H T L++KF+R+C+KS + KRY H+T+ IL++NP+ C Y   SLD+RQ I V EVPKLG+EAA+ AIKEWGQ KS+ITH+ FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS++++ TFRGPS+ H
Sbjct:   15 GPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVFFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS3_IPOBA (Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF3 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.392e-64
Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGTA P NC+ Q+ YPDYYFR TNS+H T L++KF+R+C+KS + KRY H+T+ IL++NP+ C Y   SLD+RQ I V EVPKLG+EAA+ AIK WGQ KS+ITH++FC+  G+ MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS++++ TFRGPS+AH
Sbjct:   15 GPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKGWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSEAH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.392e-64
Identity = 114/191 (59.69%), Postives = 149/191 (78.01%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGT  P NC+ Q+ YPDYYFR TNS+H T L++KF+R+C+KS + KRY H+T+ IL++NP+ C Y   SLD+RQ I V EVPKLG+EAA+ AIKEWGQ KS+ITH++FC+  G+ MP ADY LTK+L L+PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS++++ TFRGPS+ H
Sbjct:   15 GPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS1_PEA (Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.392e-64
Identity = 114/191 (59.69%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGTANP NC+ Q+ YPD+YF+ TNS+H T+L++KF+R+C+KS +K+RY ++T+ IL++NP++C Y   SLD+RQ ++V EVP+LG+EAA KAIKEWGQ KS+ITHLIFC+  G+ MP ADY LTK+L L P VKR M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPSD H
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.392e-64
Identity = 115/191 (60.21%), Postives = 148/191 (77.49%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGT  P NC+ Q+ YPDYYFR TNS+H T L++KF+R+C+KS + KRY H+T+ IL++NP+ C Y   SLD+RQ I V EVPKLG+EAA+ AIKEWGQ KS+ITH++FC+  GI MP ADY LTK+L L PSVKR+M+Y QGC+   T +R+ KD AENN   RVL +CS++++ TFRGPS+ H
Sbjct:   15 GPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLIVCSEITVVTFRGPSETH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS2_PEA (Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.818e-64
Identity = 114/191 (59.69%), Postives = 151/191 (79.06%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGTANP NC+ Q+ YPD+YF+ TNS+H T+L++KF+R+C+KS +K+RY ++T+ IL++NP++C Y   SLD+RQ ++V EVP+LG+EAA KAIKEWGQ KS+ITHLIFC+  G+ MP ADY LTK+L L P VKR M+Y QGC+   T  R+ KD AENN + RVL +CS+++  TFRGPSD H
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEDILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVFRLAKDLAENNKNARVLVVCSEVTAVTFRGPSDTH 205          
BLAST of CF834069 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.374e-64
Identity = 115/191 (60.21%), Postives = 149/191 (78.01%), Query Frame = 1
Query:   52 GLATILAIGTANPPNCLYQADYPDYYFRDTNSDHVTLLEQKFKRICEKSNVKKRYFHVTQYILRKNPNICAYDGSSLDSRQYILVREVPKLGEEAAKKAIKEWGQSKSQITHLIFCSLVGIYMPRADYLLTKMLRLNPSVKRVMLYFQGCYIVATAIRMGKDFAENNPDTRVLYICSDLSLGTFRGPSDAH 624
            G ATILAIGTANP NC+ Q+ YPD+YFR TNS+H T L+QKF+R+C+KS + +RY ++T+ IL++NP++C Y   SLD+RQ ++V EVP+LG+EAA KAIKEWGQ KS+ITHLIFC+  G+ MP ADY LTK+L L P VKR M+Y QGC+   T +R+ KD AENN   RVL +CS+++  TFRGPSD H
Sbjct:   15 GPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTH 205          
The following BLAST results are available for this feature:
BLAST of CF834069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS6_IPOBA6.249e-6560.21Chalcone synthase DII OS=Ipomoea batatas GN=CHS-DI... [more]
CHSA_PEA1.392e-6460.21Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS8_IPOBA1.392e-6460.21Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS7_IPOBA1.392e-6460.21Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHS3_IPOBA1.392e-6460.21Chalcone synthase LF3 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS2_IPOBA1.392e-6459.69Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS1_PEA1.392e-6459.69Chalcone synthase 1 OS=Pisum sativum GN=CHS1 PE=2 ... [more]
CHS1_IPOBA1.392e-6460.21Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS2_PEA1.818e-6459.69Chalcone synthase 2 OS=Pisum sativum GN=CHS2 PE=2 ... [more]
CHS5_PEA2.374e-6460.21Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834069 ID=CF834069; Name=CF834069; organism=Citrus sinensis; type=EST; length=625bp
TAATATATAATGGAGAAAGATAAAGATGGGAAGAACCAACTGCAAGGAGG
AGGGTTAGCCACGATCCTAGCCATCGGAACTGCAAATCCACCTAACTGCT
TATACCAAGCTGACTACCCTGATTATTACTTCCGTGACACCAACAGTGAC
CACGTGACTCTCCTCGAACAAAAATTCAAACGCATCTGCGAGAAATCAAA
TGTAAAGAAACGCTACTTCCATGTTACCCAATATATTCTCAGAAAGAACC
CGAATATATGTGCCTACGACGGCTCCTCCCTCGATAGCCGTCAATATATA
TTGGTTAGGGAAGTACCGAAACTTGGCGAGGAAGCGGCAAAAAAAGCAAT
CAAAGAATGGGGCCAATCAAAATCCCAGATCACGCATCTCATTTTCTGCT
CACTTGTGGGCATATACATGCCCAGGGCTGACTATCTGCTGACCAAAATG
TTGCGCCTCAACCCATCTGTCAAACGAGTCATGCTATACTTTCAAGGCTG
TTACATTGTCGCCACAGCCATCCGAATGGGCAAGGACTTTGCTGAAAACA
ACCCTGATACCCGCGTTCTATACATATGCTCTGACTTATCCCTTGGTACT
TTCCGTGGACCTTCTGATGCCCACT
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