CF834074

Overview
NameCF834074
Unique NameCF834074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834074 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = -1
Query:  300 GLQVKKDG--KWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYAREL----RGKSQLDSLRIQHGQ 638
            GLQ  +DG   WI V P+  AF+VN+GD    ++NG +++ +H+AVVN    RLS+AT  +   D  V+P +    E+ P L   +   E +R +  R+L    R K   D L  Q  Q
Sbjct:  236 GLQATRDGGKNWITVQPISGAFVVNLGDHGHFMSNGRFKNADHQAVVNGESSRLSIATFQNPAPDARVWPLAVREGEE-PILEEPITFTEMYRRKMERDLDLAKRKKQAKDQLMQQQLQ 353          
BLAST of CF834074 vs. ExPASy Swiss-Prot
Match: FL3H_DIACA (Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthus caryophyllus GN=FHT PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.502e-11
Identity = 37/100 (37.00%), Postives = 59/100 (59.00%), Query Frame = -1
Query:  345 GLQVKKDG--KWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYAREL 638
            GLQ  +DG   WI V P+P AF+VN+GD    ++NG +++ +H+AVVNS   RLS+AT  +   D  VYP +    E +  +   +   + +R + A++L
Sbjct:  234 GLQATRDGGKTWITVQPVPGAFVVNLGDHGHFLSNGRFKNADHQAVVNSECSRLSIATFQNPSPDATVYPLAIREGENS-IMEEPITFADLYRRKMAKDL 332          
BLAST of CF834074 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.268e-11
Identity = 40/103 (38.83%), Postives = 55/103 (53.40%), Query Frame = -1
Query:  345 GLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLIS-----EKTPPLFRRVRIEEYFRSRYAREL 638
            GLQV  D KW  + P P AF+VNIGDT   +TNG Y+S  HRAVVNS +ER + A     + +  V P   L++     E+  P F      E+ +  Y  ++
Sbjct:  262 GLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFFLCPKGEKVVKPPEELVNGVKSGERKYPDFTWSMFLEFTQKHYRADM 364          
BLAST of CF834074 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.268e-11
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = -1
Query:  345 GLQVKKD-GK-WIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEYFRSRYAREL 638
            GLQ  +D GK WI V P+  AF+VN+GD   +++NG +++ +H+AVVNS   RLS+AT  +   +  VYP S    EK P L   +   E ++ + +++L
Sbjct:  234 GLQATRDDGKTWITVQPVEGAFVVNLGDHGHLLSNGRFKNADHQAVVNSNSSRLSIATFQNPAQEAIVYPLSVREGEK-PILEAPITYTEMYKKKMSKDL 332          
BLAST of CF834074 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.268e-11
Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = -1
Query:  372 EGLQVKKDGKWIPVTPLPDAFIVNIGDTLEIITNGTYRSIEHRAVVNSVQERLSVATVYSVRYDGEVYPASSLISEKTPPLFRRVRIEEY 641
            +GLQV KD  W  V  +P+A I++IGD +EI++NG Y+S+ HR  VN  + R+S         +    P S LI+++ P  F+  + ++Y
Sbjct:  238 QGLQVHKDDHWYDVKYIPNALIIHIGDQIEIMSNGKYKSVYHRTTVNKDKTRMSWPVFLEPPPELLTGPISKLITDENPAKFKTKKYKDY 327          
The following BLAST results are available for this feature:
BLAST of CF834074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
FL3H_HORVU2.502e-1136.13Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FL3H_DIACA2.502e-1137.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Dianthu... [more]
GAOX3_ARATH3.268e-1138.83Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
FL3H_MALDO3.268e-1139.00Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
FLS_PETCR4.268e-1136.67Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_04N20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834074 ID=CF834074; Name=CF834074; organism=Citrus sinensis; type=EST; length=647bp
TTTTTTTTTTTTTTTTTGCAAAATTCTATTTCAAAAAAGAAAGATACTGA
TCTGATATAAGCACCACCATATATCATCGGAAGATTCCAGGCATAAGTCT
GCAATTCTTAAGATTCTTACATGTTCTATTCAGTATCTCAAATGATAGAG
CTACACAACGATCCCAGCATGGCAGGTTATACCACAGTATTCATAGAACT
TATTTCTTATTTTCAGTTCCACACACAATCTCAATAGCAAGGTCCTTCAG
AGTTTTTGTACCAAACTCTTTAGTTATCCGAAATAAACTTATACTAGCCT
TGACCATGTTGAATTCTCAGGGAATCCAGCTGAGATTTTCCCCTAAGCTC
ACGAGCATACCGGCTCCTAAAGTATTCTTCAATTCTCACTCTTCTAAACA
AAGGAGGAGTTTTTTCAGAGATCAAACTGGAGGCAGGATATACTTCACCA
TCATATCTCACTGAGTAAACTGTGGCAACGGAAAGTCTTTCCTGTACAGA
GTTTACAACTGCACGATGCTCAATGCTGCGGTATGTCCCATTGGTTATAA
TCTCCAATGTGTCTCCAATGTTGACAATGAAAGCATCCGGGAGTGGGGTA
ACAGGAATCCACTTTCCATCCTTCTTTACCTGGAGACCCTCCCACTT
back to top