CF834075

Overview
NameCF834075
Unique NameCF834075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2617 contig Csv1_Contig2617:78..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.934e-30
Identity = 85/259 (32.82%), Postives = 133/259 (51.35%), Query Frame = 1
Query:   28 VQELAKNPALV--VPDRYIRPDQDSPLISDDT-LISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQG------MRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            VQ+++ +  L   +P  +IR +++ P I+        IPV+D+     EES+   + K     +EWG FQ+VNHG+ T  + +L+     FF L   EK+   +     D+EG+G       E K  W D       P        +PK PP  RE  E Y++ +K L+E L+  + + L +K + ++E    GL G      M++NYYPPCP+P+  +G+  H+D + +T+L+  NEV GLQV KD  W     +P A
Sbjct:    6 VQDISSSSLLTEAIPLEFIRSEKEQPAITTFRGPTPAIPVVDLSD-PDEESVRRAVVKAS---EEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDALKE----GLGGEMAEYMMKINYYPPCPRPDLALGVPAHTDLSGITLLVP-NEVPGLQVFKDDHWFDAEYIPSA 255          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.526e-30
Identity = 82/245 (33.47%), Postives = 127/245 (51.84%), Query Frame = 1
Query:   61 VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHS-EESMDSELAKL-DFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH--LRKPHLFPKLPPSLRETLEVYSM---ELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            +P ++I P+ +SP   D      +P+ID+  + S +    +E+ +L    C+  GFFQ+VNHG+    L    + V+ FF + + EK++  +RPG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYPPC +P + +G  PH D  +LTIL Q N V GLQV  +G+W  + P  DAF
Sbjct:   17 IPSQFIWPEGESPT-PDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAF 259          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.526e-30
Identity = 77/242 (31.82%), Postives = 132/242 (54.55%), Query Frame = 1
Query:   61 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            +P  YIR + + P ++    ++ Q+PVID+ S ++ E    EL  +    +EWG FQ+VNHG+    + KL+K  + FF L  +EK+   +  G   +EG+G         K  W D    +  P      + +P  PP  RE  E Y++ L+ + + L   +   + ++  E+++    ++ +  +++NYYPPCP+P+  +G+  H+D +A+TIL+  NEV+GLQV KD  W  V  +P+A
Sbjct:   19 IPSEYIRSESEQPAVTTMQGVVLQVPVIDLGSSNNTEENLVEL--IAEASREWGIFQVVNHGIPDDAIAKLQKVGKEFFELPQQEKEVIAKPEGYQGVEGYGTKLQKELGGKKGWVDHLFHIIWPKSAVNYNFWPNNPPLYREANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVP-NEVQGLQVHKDDHWYDVKYIPNA 257          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.628e-30
Identity = 85/272 (31.25%), Postives = 141/272 (51.84%), Query Frame = 1
Query:    1 RGSSLLVPCVQELAKNPAL--------VVPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHS-EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFN-LSMEEKKKYWQRPG--DMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            +G S       E+A+  A+         +P  YIR + + P  +    ++ ++PVID+ ++   EE +  E+ +     KEWG FQ++NHG+    +E L+K  + FF  +  EEK+   ++PG   +EG+G +     E K  W D       P        +PK PPS RE  E Y+  L+ +A+ +   +   L ++  EM E    E+ +  +++NYYPPCP+P+  +G+  H+D + +T+L+  NEV   QV KDG W  V  +P+A
Sbjct:    5 QGQSATTALTMEVARVQAISSITKCMDTIPSEYIRSENEQPAATTLQGVVLEVPVIDISNVDDDEEKLVKEIVEAS---KEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVAHTDMSYITLLVP-NEV---QVFKDGHWYDVNYIPNA 269          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.628e-30
Identity = 74/240 (30.83%), Postives = 126/240 (52.50%), Query Frame = 1
Query:   70 RYIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSE---LAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDG--KWIPVTPLPDAF 774
            +++R + + P I+ +    +IPVI +  +  ++S+D       K+   C++WG FQ+V+HG+    + ++ +    FF L  EEK ++    G   GF  +  +  E   DW ++ +  + P+  R    +P  P   R   E+YS EL  LA  L+  + E + ++ E + +   +  Q + +NYYP CPQP   +GL  H+D   +T+LLQ ++V GLQ  +DG   WI V P+  AF
Sbjct:   18 KFVRDEDERPKIAYNKFSDEIPVISLAGI-DDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTDPGTITLLLQ-DQVGGLQATRDGGKTWITVQPVEGAF 255          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.351e-30
Identity = 72/217 (33.18%), Postives = 122/217 (56.22%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            ++  PV+D+  ++ EE   + L K++  C+ WGFF+LVNHGMST  L+ ++K  +  +  +ME++ K       ++      V SE   LDW   F +  LP         P L    R+T++ +++EL+ LAE L+  + E L ++   +++ F        G +++ YPPCP+P+ + GL  HSDA  + +L Q ++V GLQ+ KDG+W+ V P+
Sbjct:    1 MATFPVVDLSLVNGEERA-ATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEMVAAKGLDD-----VQSEIHDLDWESTFFLRHLPSSNISE--IPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.600e-30
Identity = 81/245 (33.06%), Postives = 127/245 (51.84%), Query Frame = 1
Query:   61 VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHS-EESMDSELAKL-DFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH--LRKPHLFPKLPPSLRETLEVYSM---ELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            +P ++I P+ +SP   D      +P+ID+  + S + +  +E+ +L    C+  GFFQ+VNHG+    L    + V+ FF + + EK++  + PG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYPPC +P + +G  PH D  +LTIL Q N V GLQV  +G+W  + P  DAF
Sbjct:   17 IPSQFIWPEGESPT-PDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAF 259          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.600e-30
Identity = 81/245 (33.06%), Postives = 128/245 (52.24%), Query Frame = 1
Query:   61 VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHS-EESMDSELAKL-DFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH--LRKPHLFPKLPPSLRETLEVYSM---ELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            +P ++I P+ +SP   D      +P+I++  + S + +  +E+ +L    C+  GFFQ+VNHG+    L    + V+ FF + + EK++  +RPG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYPPC +P + +G  PH D  +LTIL Q N V GLQV  +G+W  + P  DAF
Sbjct:   17 IPSQFIWPEGESPT-PDAAEELHVPLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAF 259          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAOX1_ARATH (Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.254e-29
Identity = 78/256 (30.47%), Postives = 132/256 (51.56%), Query Frame = 1
Query:   46 NPALV-----VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKL-DFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLR-------ETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            NP+++     +P+++I PD + P I+   L   +P+ID+Q+L S+ S   + ++L    CK+ GFF +VNHG+S   +    +    FF++ + EK++  ++ G+  G+  +F      KL W +  S        R   +      +L        +  + Y   + +L+  ++  +G  L +K +  REFFE     MR+NYYPPC +P+  +G  PH D  +LTIL Q + V GLQV  + +W  + P P AF
Sbjct:   30 NPSMLNLQANIPNQFIWPDDEKPSIN--VLELDVPLIDLQNLLSDPSSTLDASRLISEACKKHGFFLVVNHGISEELISDAHEYTSRFFDMPLSEKQRVLRKSGESVGYASSFTGRFSTKLPWKETLSFRFCDDMSRSKSVQDYFCDALGHGFQPFGKVYQEYCEAMSSLSLKIMELLGLSLGVKRDYFREFFEENDSIMRLNYYPPCIKPDLTLGTGPHCDPTSLTILHQ-DHVNGLQVFVENQWRSIRPNPKAF 282          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO_MUSAC (1-aminocyclopropane-1-carboxylate oxidase OS=Musa acuminata GN=MAO1B PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.139e-29
Identity = 79/225 (35.11%), Postives = 122/225 (54.22%), Query Frame = 1
Query:  130 IPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDM------EGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ-----GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            IPVID   L  +E  ++ +A++   C+EWGFFQLVNHG+    LE++KK     + L   E++    +P  +      EG GQ         +DW D+F        L+  + +P  PP   ET++ Y  E++ LAE ++  M E L  +   +++ F    Q     G ++++YPPCP+ + V GL  H+DA  + +L Q ++V GLQ+ KDG+WI V PL DA
Sbjct:    3 IPVIDFSKLDGKERAET-MARIANGCEEWGFFQLVNHGIPVELLERVKKVSSECYKL--REERFEGSKPVQLLDTLVKEGDGQRL-----DNVDWEDVFV-------LQDDNEWPSNPPDFEETMKEYREEIRKLAEKMMEVMDENLGFEKGCIKKAFSGDGQHPPFFGTKVSHYPPCPRLDLVKGLRAHTDAGGVILLFQDDQVGGLQMLKDGRWIDVQPLADA 212          
The following BLAST results are available for this feature:
BLAST of CF834075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
FLS1_ARATH1.934e-3032.82Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
GAO1B_WHEAT2.526e-3033.47Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
FLS_PETCR2.526e-3031.82Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FLS_SOLTU5.628e-3031.25Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
FL3H_PETCR5.628e-3030.83Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
ACCO1_MALDO7.351e-3033.181-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
GAO1D_WHEAT9.600e-3033.06Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
GAO1A_WHEAT9.600e-3033.06Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
GAOX1_ARATH1.254e-2930.47Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana G... [more]
ACCO_MUSAC2.139e-2935.111-aminocyclopropane-1-carboxylate oxidase OS=Musa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834075 ID=CF834075; Name=CF834075; organism=Citrus sinensis; type=EST; length=774bp
CGGGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGCCAAGAATCC
GGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCACCCC
TCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATGCAA
AGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAGCCAAGCTCGACTT
CGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGAGCA
CAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAATCTC
AGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAGGAGATATGGAAGG
ATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGGCTG
ACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAGGAAACCACATTTA
TTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTCAAT
GGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAAATGGGAGAAGTGT
TAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGACTGCAA
GGAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGTTAT
GGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACCATTCTGCTACAAC
TTAATGAAGTGGAGGGTCTCCAGGTAAAGAAGGATGGAAAGTGGATTCCT
GTTACCCCACTCCCGGATGCTTTC
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