CF834075

Overview
NameCF834075
Unique NameCF834075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2617 contig Csv1_Contig2617:78..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.880e-28
Identity = 87/268 (32.46%), Postives = 128/268 (47.76%), Query Frame = 1
Query:    4 GSSLLVPC---VQELAKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHS--EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSM-----MTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            GS +  P    V +L   P   +P+ ++ P+ D+   S   L   +PV+D+  L     E +    A++   C   GFFQ+  HG+  A           FF L + EK++  + PG + G+  A       KL W +  S         PV        L P   P  R   + Y  E+K L+  ++  +   L ++    REFF +    MR NYYPPCP+PE+ +G  PH D  ALTILLQ ++V GL+V  DG+W PV+P+P A
Sbjct:   22 GSGIAAPAAAAVCDLRMEPK--IPEPFVWPNGDARPASAAEL--DMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGA 283          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.880e-28
Identity = 87/268 (32.46%), Postives = 128/268 (47.76%), Query Frame = 1
Query:    4 GSSLLVPC---VQELAKNPALVVPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHS--EESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSM-----MTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            GS +  P    V +L   P   +P+ ++ P+ D+   S   L   +PV+D+  L     E +    A++   C   GFFQ+  HG+  A           FF L + EK++  + PG + G+  A       KL W +  S         PV        L P   P  R   + Y  E+K L+  ++  +   L ++    REFF +    MR NYYPPCP+PE+ +G  PH D  ALTILLQ ++V GL+V  DG+W PV+P+P A
Sbjct:   22 GSGIAAPAAAAVCDLRMEPK--IPEPFVWPNGDARPASAAEL--DMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGR-VYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTALTILLQ-DDVGGLEVLVDGEWRPVSPVPGA 283          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.880e-28
Identity = 75/246 (30.49%), Postives = 129/246 (52.44%), Query Frame = 1
Query:   61 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRP--GDMEGFGQAFV--VSEEQ--KLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            +P  +IR + + P I+     + ++P+ID     S+   +  + ++      WG +Q+VNH + +  + KL+   + FF L  EEK+ Y + P    +EG+G      +SE    K  W D       P  +     +PK PPS RE  E Y+  L  + E L   +   L ++ +E+++    +N    +++NYYPPCP+P+  +G+  H+D + +TIL+  N+V+GLQ  KDG+W  V  +P+A
Sbjct:   17 IPAEFIRSENEQPGITTVHGKVLEVPIIDF----SDPDEEKLIVQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTDMSTVTILVP-NDVQGLQACKDGRWYDVKYIPNA 257          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.174e-27
Identity = 79/248 (31.85%), Postives = 126/248 (50.81%), Query Frame = 1
Query:   61 VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSEES-MDSELAKL-DFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLP---VHLR--KPHLFPKLPPSLRETLEVY---SMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            +P +++ PD + P  S D    Q+P+ID+    S +S + SE  +L      + GFF + NHG+  + L +    ++ FF     EK+K  ++ G+  G+  +FV     KL W +  S    P   +H +  K  +  K+     +  +VY   +  + TL+  ++  +G  L ++    +EFFE+     R+NYYP C QPE  +G  PH D  +LTIL Q ++V GLQV  D KW  + P P AF
Sbjct:   37 IPQQFVWPDHEKP--STDVQPLQVPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYPQCKQPELALGTGPHCDPTSLTILHQ-DQVGGLQVFVDNKWQSIPPNPHAF 281          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.533e-27
Identity = 70/237 (29.54%), Postives = 125/237 (52.74%), Query Frame = 1
Query:   73 YIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELA-KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKD-GK-WIPVTPLPDAF 774
            +IR + + P ++ +   ++IP+I ++ +  E    +E+  K+   C++WG FQ+V+HG+    + ++    + FF L  EEK ++    G   GF  +  +  E   DW ++ +  + P   R    +P  P       + YS +L  LA  L+  + E + ++ E + +   +  Q + +N+YP CP+P+  +GL  H+D   +T+LLQ ++V GLQ  KD GK WI V P+  AF
Sbjct:   22 FIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYPKCPEPDLTLGLKRHTDPGTITLLLQ-DQVGGLQATKDNGKTWITVQPVEGAF 257          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSI (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. indica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.824e-27
Identity = 70/217 (32.26%), Postives = 118/217 (54.38%), Query Frame = 1
Query:  124 SQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ----GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            S  PVI+M+ L  EE   + + +LD  C+ WGFF+++NHG+ST  +++++K  +  +    E++   +      EG      V++ +KLDW   F +  LP         P L    R  ++ ++ EL+TLAE L+  + E L ++   + + F         G +++ YPPCP+P+ V GL  H+DA  + +L Q + V GLQ+ KDG+W+ V P+
Sbjct:    5 STFPVINMELLAGEER-PAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPESNIAD--IPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVKGLRAHTDAGGIILLFQDDSVGGLQLLKDGEWVDVPPM 215          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_ORYSJ (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Oryza sativa subsp. japonica GN=ACO1 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.607e-27
Identity = 70/217 (32.26%), Postives = 118/217 (54.38%), Query Frame = 1
Query:  124 SQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ----GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            S  PVI+M+ L  EE   + + +LD  C+ WGFF+++NHG+ST  +++++K  +  +    E++   +      EG      V++ +KLDW   F +  LP         P L    R  ++ ++ EL+TLAE L+  + E L ++   + + F         G +++ YPPCP+P+ V GL  H+DA  + +L Q + V GLQ+ KDG+W+ V P+
Sbjct:    5 STFPVINMELLAGEER-PAAMEQLDDACENWGFFEILNHGISTELMDEVEKMTKDHYKRVREQRFLEFASKTLKEGCDD---VNKAEKLDWESTFFVRHLPESNIAD--IPDLDDDYRRLMKRFAAELETLAERLLDLLCENLGLEKGYLTKAFRGPAGAPTFGTKVSSYPPCPRPDLVEGLRAHTDAGGIILLFQDDRVGGLQLLKDGEWVDVPPM 215          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.935e-27
Identity = 76/255 (29.80%), Postives = 126/255 (49.41%), Query Frame = 1
Query:   46 NPALV-----VPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEV-------YSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            NP+L+     +P+++I PD++ P I    L   +P ID+ S  S       +A+    C + GFF +VNHG+S + +    + +E FF++ +  K+K  ++PG+  G+  +F      KL W +  S      +     +      +L +  E        Y   + +L+  ++  +G  L +  +  R FFE     MR+N+YPPC  P+  +G  PH D ++LTIL Q + V GLQV  D +W  + P P AF
Sbjct:   32 NPSLLNLQSQIPNQFIWPDEEKPSIDIPEL--NVPFIDLSSQDSTLEAPRVIAE---ACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCDPSSLTILHQ-DHVNGLQVFVDNQWQSIRPNPKAF 280          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.695e-26
Identity = 67/217 (30.88%), Postives = 115/217 (53.00%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I+++ L+  E  D+ +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F        G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KDG+WI V P+
Sbjct:    1 MENFPIINLEKLNGSER-DATMEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPVSNISE--VPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 66/236 (27.97%), Postives = 118/236 (50.00%), Query Frame = 1
Query:   73 YIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDG--KWIPVTPLPDAF 774
            ++R + + P ++ D     +P+I +  +           ++   C++WG FQ+++HG+    +  + +    FF L  E+K +Y    G   GF  +  +  E   DW ++ +  + PV  R    +P+ P      +E YS  L  L+ NL+  + E + ++ E + +   +  Q + +N+YP CPQP+  +GL  H+D   +T+LLQ + V GLQ  +DG   WI V P+  AF
Sbjct:   24 FVRDEDERPKVAHDRFSDAVPLISLHGIDGARRAQIR-DRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTDPGTITLLLQ-DLVGGLQATRDGGKNWITVQPISGAF 257          
The following BLAST results are available for this feature:
BLAST of CF834075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
GAOX2_ORYSJ6.880e-2832.46Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI6.880e-2832.46Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
FLS_MALDO6.880e-2830.49Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
GAOX3_ARATH1.174e-2731.85Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
FL3H_PETHY1.533e-2729.54Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
ACCO1_ORYSI5.824e-2732.261-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
ACCO1_ORYSJ7.607e-2732.261-aminocyclopropane-1-carboxylate oxidase 1 OS=Ory... [more]
GAOX2_ARATH9.935e-2729.80Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
ACCO3_PETHY1.695e-2630.881-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
FL3H_HORVU2.213e-2627.97Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834075 ID=CF834075; Name=CF834075; organism=Citrus sinensis; type=EST; length=774bp
CGGGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGCCAAGAATCC
GGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCACCCC
TCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATGCAA
AGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAGCCAAGCTCGACTT
CGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGAGCA
CAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAATCTC
AGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAGGAGATATGGAAGG
ATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGGCTG
ACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAGGAAACCACATTTA
TTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTCAAT
GGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAAATGGGAGAAGTGT
TAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGACTGCAA
GGAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGTTAT
GGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACCATTCTGCTACAAC
TTAATGAAGTGGAGGGTCTCCAGGTAAAGAAGGATGGAAAGTGGATTCCT
GTTACCCCACTCCCGGATGCTTTC
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