CF834075

Overview
NameCF834075
Unique NameCF834075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2617 contig Csv1_Contig2617:78..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 67/217 (30.88%), Postives = 116/217 (53.46%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I+++ L+  E  D+ +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F   +    G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KDG+WI V P+
Sbjct:    1 MENFPIINLEKLNGSERADT-MEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPVS--NICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIFYGTKGPNFGSKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGQWIDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.213e-26
Identity = 68/219 (31.05%), Postives = 121/219 (55.25%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHL--FPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQ-GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I+++ L+ E    + + K+   C+ WGFF+LV+HG+ T FL+ +++  +  +   +E++ K       +E      V +E   +DW   F +     HL K ++   P L    R  ++ ++++L+ LAE L+  + E L ++   +++ F   NG   G +++ YPPCP PE + GL  H+DA  L +L Q ++V GLQ+ KDG+WI V P+
Sbjct:    1 MENFPIINLEGLNGE-GRKATMEKIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEA-----VKTEVNDMDWESTFYLR----HLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAFYGTNGPTFGTKVSNYPPCPNPELIKGLRAHTDAGGLILLFQDDKVSGLQLLKDGQWIDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.775e-26
Identity = 67/217 (30.88%), Postives = 116/217 (53.46%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P++DM  L++E+   S +  +   C+ WGFF+ VNHG+S   ++ ++K  +  +   ME++ K       +E      V SE   LDW   F +  LPV        P L    R+ ++ ++++L+ LAE L+  + E L ++   +++ F        G +++ YPPCP+PE + GL  H+DA  + +L Q ++V GLQ+ KD +WI V P+
Sbjct:    1 MENFPIVDMGKLNTEDRK-STMELIKDACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLE-----CVQSEIDDLDWESTFFLRHLPVSSISE--IPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.775e-26
Identity = 68/213 (31.92%), Postives = 116/213 (54.46%), Query Frame = 1
Query:  133 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            PVI+M +L+ E  + S L +++  C+ WGFF+LVNHG+S   ++K++K  +  +   ME++ K       ++      V +E    DW   F +  LPV          L    ++ ++ ++ EL+ LAE ++  + E L ++   +++ F        G +++ YPPCP+PE + GL  H+DA  L +L Q ++V GL V KDGKW+ V P+
Sbjct:    6 PVINMNNLNGESRV-SVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEMVASKGLDS-----VETEINDTDWESTFFLRHLPVSNMSE--IGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQDDKVSGLHVLKDGKWVDVPPM 210          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.775e-26
Identity = 66/217 (30.41%), Postives = 114/217 (52.53%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I+++ L+  E + + + K++  C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V  E   +DW   F +  LP         P L    RE +  +   L+ LAE L+  + E L ++   ++  F        G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KDG+WI V P+
Sbjct:    1 MENFPIINLEKLNGAERV-ATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEG-----VEVEVTDMDWESTFFLRHLPSS--NISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGRWIDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_BRAJU (1-aminocyclopropane-1-carboxylate oxidase OS=Brassica juncea GN=ACO PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 66/217 (30.41%), Postives = 117/217 (53.92%), Query Frame = 1
Query:  127 QIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLF--PKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            + PV+D+  L  EE  D  +A ++  C+ WGFF++VNHG+    ++  +K  +  + +SME+K     +   +E   +     E + +DW   F +     HL + +L+  P +    R  ++ +   L+ LAE+L+  + E L ++   +++ F   +    G +++ YP CP+PE + GL  H+DA  + +L Q ++V GLQ+ KDG WI V PL
Sbjct:    6 KFPVVDLSKLIGEER-DQTMALINDACENWGFFEIVNHGLPHDLMDNAEKMTKEHYKISMEQKFNDMLKSKGLENLER-----EVEDVDWESTFYLR----HLPQSNLYDIPDMSDEYRTAMKDFGKRLENLAEDLLDLLCENLGLEKGYLKKVFHGTKGPTFGTKVSNYPACPKPEMIKGLRAHTDAGGIILLFQDDKVTGLQLLKDGDWIDVPPL 212          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_ARATH (1-aminocyclopropane-1-carboxylate oxidase OS=Arabidopsis thaliana GN=ACO PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 4.931e-26
Identity = 66/217 (30.41%), Postives = 118/217 (54.38%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I+++ L+ EE   + + K+   C+ WGFF+ VNHG+S   L+K++K  +  +   MEE+ K       ++  G   + SE   +DW   F +  LPV        P L    R  ++ ++ +++ L+E L+  + E L ++   +++ F    +   G +++ YPPCP P+ V GL  H+DA  + +L Q ++V GLQ+ KDG+W+ V P+
Sbjct:    1 MESFPIINLEKLNGEERAIT-MEKIKDACENWGFFECVNHGISLELLDKVEKMTKEHYKKCMEERFKE-----SIKNRGLDSLRSEVNDVDWESTFYLKHLPVSNISD--VPDLDDDYRTLMKDFAGKIEKLSEELLDLLCENLGLEKGYLKKVFYGSKRPTFGTKVSNYPPCPNPDLVKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWVDVPPV 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.098e-25
Identity = 70/222 (31.53%), Postives = 117/222 (52.70%), Query Frame = 1
Query:   97 PLISDDTLISQIPVIDMQSLHSEESM--DSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEG-FGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPV 753
            PL SD   +  IP ID+     ++++  ++ + ++     +WGFFQ++NHG+S   LEK+KK V  F   S E +K+++ R       +   F +      +W D FS  T+     KP     LP   R+ +  YS ++  L + L   + E L ++   + +   +    M  +YYPPCP+P+  +G S HSD + LT+LL  +++EGLQV+++G W  V
Sbjct:   53 PLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFS-CTMAPDTPKPQ---DLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYPPCPEPDLTLGTSQHSDNSFLTVLLP-DQIEGLQVRREGHWFDV 269          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.196e-25
Identity = 66/217 (30.41%), Postives = 114/217 (52.53%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I++++L   E  D+ +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F        G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KD +WI V P+
Sbjct:    1 MENFPIINLENLCGAER-DATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPVSNISE--VPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.174e-25
Identity = 64/217 (29.49%), Postives = 112/217 (51.61%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I +  ++  E   + +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V +E   +DW   F +  LP+        P L    RE +  ++  L+ LAE L+  + E L ++   ++  F        G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KDG+WI V P+
Sbjct:    1 MENFPIISLDKVNGVERA-ATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLPISNISE--VPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPM 209          
The following BLAST results are available for this feature:
BLAST of CF834075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ACCO_TOBAC2.213e-2630.881-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_PRUMU2.213e-2631.051-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
ACCO_PEA3.775e-2630.881-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO3_CUCME3.775e-2631.921-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO2_SOLLC3.775e-2630.411-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_BRAJU4.931e-2630.411-aminocyclopropane-1-carboxylate oxidase OS=Brass... [more]
ACCO1_ARATH4.931e-2630.411-aminocyclopropane-1-carboxylate oxidase OS=Arabi... [more]
ACCH3_ARATH1.098e-2531.531-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO4_PETHY3.196e-2530.411-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_PETHY4.174e-2529.491-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834075 ID=CF834075; Name=CF834075; organism=Citrus sinensis; type=EST; length=774bp
CGGGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGCCAAGAATCC
GGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCACCCC
TCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATGCAA
AGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAGCCAAGCTCGACTT
CGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGAGCA
CAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAATCTC
AGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAGGAGATATGGAAGG
ATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGGCTG
ACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAGGAAACCACATTTA
TTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTCAAT
GGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAAATGGGAGAAGTGT
TAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGACTGCAA
GGAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGTTAT
GGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACCATTCTGCTACAAC
TTAATGAAGTGGAGGGTCTCCAGGTAAAGAAGGATGGAAAGTGGATTCCT
GTTACCCCACTCCCGGATGCTTTC
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