CF834075

Overview
NameCF834075
Unique NameCF834075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.120e-25
Identity = 64/217 (29.49%), Postives = 113/217 (52.07%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I+++ L+ +E  ++ +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LP         P L    RE +  ++  L+ LAE L+  + E L ++   ++  F        G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KD +WI V P+
Sbjct:    1 MENFPIINLEKLNGDERANT-MEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPTS--NISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.214e-24
Identity = 64/217 (29.49%), Postives = 113/217 (52.07%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   P+I++++L+ +E   + +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LP         P L    RE +  ++  L+ LAE L+  + E L ++   ++  F        G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KD +WI V P+
Sbjct:    1 MENFPIINLENLNGDERAKT-MEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPTS--NISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPM 209          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.072e-24
Identity = 76/235 (32.34%), Postives = 115/235 (48.94%), Query Frame = 1
Query:   97 PLISDDTLISQIPVIDMQSLHSEESMDSELA--KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKL------DWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRM--NYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            PL SD   +  IP ID+     ++++  + A   +     +WGFFQ++NHG+S   LEK+K  V  F     E +K  + R      FG+ F+      L      +W D F     P     P     LP   R+ +  YS ++  L E L   + E L +    +++     L+G+RM  +Y+PPCP+P+   G S HSD + LT+LL  N +EGLQV ++G W  V  +P A
Sbjct:   53 PLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSR-----DFGRKFIYLSNFDLYTAAAANWRDTFYCYMAP----DPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDM--ECLKGLRMLCHYFPPCPEPDLTFGTSKHSDGSFLTVLLPDN-IEGLQVCREGYWFDVPHVPGA 275          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.534e-24
Identity = 78/221 (35.29%), Postives = 116/221 (52.49%), Query Frame = 1
Query:  127 QIPVIDMQSL--HSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF-ENGLQG---MRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            ++PVID+  L   +EE  +     +    +EWGFFQ++NHG+S   LEK+++E    F    ++K K  +       +G     S  Q L W++ F +    +   K         +L  T+E ++ E + LA  L     EVL  K  +   FF EN ++    +RMN YPPCP+P +V GL PH+D+  LTIL Q ++V GLQ+ KD +WI V P P A
Sbjct:   41 ELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFSAGSYRWGTPSATSIRQ-LSWSEAFHVPMTDISDNKDFT------TLSSTMEKFASESEALAYML----AEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQ-DQVGGLQLIKDNRWIAVKPNPKA 249          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_DORSP (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Doritaenopsis sp. GN=ACO1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.027e-24
Identity = 65/216 (30.09%), Postives = 115/216 (53.24%), Query Frame = 1
Query:  133 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEK-KKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGM-----RMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            PVI+M+ L   +   + +A L   C+ WG ++L+NHG+S   + +++   +  +    E++ K++  +  D           E + LDW   F +  LP         P L    R T++ +++EL+ LAE L+  + E L ++   +++ F  G  G+     +++ YPPCP+PE + GL  H+DA  + +L Q ++V GLQ+ KDG+WI V P+
Sbjct:    7 PVINMELLQGSQR-PAAMALLRDACENWGLYELLNHGISHELMNRVETVNKEHYRRFREQRFKEFASKTLD------TVENVEPENLDWESTFFLRHLPTS--NISQIPDLDDDCRSTMKEFALELENLAERLLDLLCEDLGLEKGYLKKVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWIDVPPV 213          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO1_CUCME (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Cucumis melo GN=ACO1 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.872e-24
Identity = 62/216 (28.70%), Postives = 115/216 (53.24%), Query Frame = 1
Query:  133 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            P+I++++++ ++     L +++  C+ WGFF+LVNHG+   FL+ ++K     +   MEE+ K       +E        +E   +DW   F +  LP           L    ++ ++ ++ +L+ LAE L+  + E L ++   +++ F   +    G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KDG WI V P+  A
Sbjct:    5 PIINLENIN-DDGRAKILEQIEDACQNWGFFELVNHGIPHEFLDMVEKMTRDHYKKCMEERFKETVLSKGLEA-----AQAEVNDMDWESTFFLRHLPES--NISQMSDLDEEYKKIMKEFAKKLENLAEELLDLLCENLGLEKGYLKKAFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGNWIDVPPMRHA 212          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.028e-23
Identity = 68/216 (31.48%), Postives = 106/216 (49.07%), Query Frame = 1
Query:  130 IPVIDMQSLHSEE-SMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQR-PGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            IP ID++   ++  +  S + K+    ++WGFFQ++NHG+    LEK+   +  F     E KK ++ R P     +   F +      +W D     T P     P     LP +  E +  YS E+  L + L   + E L +    +++        +  +YYPPCPQP+  +GL+ HSD + LTILLQ + + GLQV  D  W+ V P+P A
Sbjct:   62 IPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAP----DPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQ-DHIGGLQVLHDQYWVDVPPVPGA 272          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.343e-23
Identity = 80/273 (29.30%), Postives = 135/273 (49.45%), Query Frame = 1
Query:   10 SLLVPCVQELAKNPALV-----VPDRYIRPDQDSP-LISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRK------PHLFPKLPPS----LRETLEVYSMELKTLAENLISKMGEVLNIKDEE---MREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            S++V   QE+  + A++     +P ++I P ++SP  ++ + L  ++ +ID+ +     S+  ++ +    C+  GFF +VNHG+  A LE+  + ++ FF L + EK++  +R G+  G+  +F      KL W +  S         +       +L  KL       L E    Y  E+  L+  L+  +GE L I  +     R FF+     MR+NYYP C +P   +G  PH D  +LTIL Q + V GL+V  +G+W  + P P A
Sbjct:    2 SMVVQQEQEVVFDAAVLSGQTEIPSQFIWPAEESPGSVAVEEL--EVALIDVGAGAERSSVVRQVGE---ACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCDPTSLTILHQ-DHVGGLEVWAEGRWRAIRPRPGA 268          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO_DIACA (Probable 1-aminocyclopropane-1-carboxylate oxidase OS=Dianthus caryophyllus GN=ACO PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.754e-23
Identity = 64/220 (29.09%), Postives = 115/220 (52.27%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELA--KLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDM-EGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF--ENGLQ-GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            I   P+IDM+ L++   ++  L   ++   C  WGFFQ+VNH +S   ++K+++  +  +    E+K K      DM +  G     S+   +DW   F +   P         P L    R+ ++ ++ +++ L+E L+  + E L ++   ++  F   NG   G +++ YPPCP+P+ + GL  H+DA  + +L Q ++V GLQ+ KDG W+ V P+
Sbjct:    4 IVNFPIIDMEKLNNYNGVERSLVLDQIKDACHNWGFFQVVNHSLSHELMDKVERMTKEHYKKFREQKFK------DMVQTKGLVSAESQVNDIDWESTFYLRHRPTSNISE--VPDLDDQYRKLMKEFAAQIERLSEQLLDLLCENLGLEKAYLKNAFYGANGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGHWVDVPPM 215          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO_PERAE (1-aminocyclopropane-1-carboxylate oxidase OS=Persea americana GN=ACO PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.991e-23
Identity = 63/219 (28.77%), Postives = 114/219 (52.05%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGM-----RMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            +   PVI+M+ L  +E   + +  ++  C+ WGFF+LVNH +    ++++++  +  +   ME++ K       +EG      V +   +DW   F +  LPV        P L    R+ ++ ++ +L+ LAE ++  + E L ++   ++  F     G+     +++ YPPCP+PE   GL  H+DA  L +L Q + V GLQ+ KDG+W+ V P+
Sbjct:    1 MDSFPVINMEKLEGQERA-ATMKLINDACENWGFFELVNHSIPVELMDEVERLTKEHYKKCMEQRFKELMA-SKVEG-----AVVDANDMDWESTFFIRHLPVSNLSE--IPDLTDEHRKVMKEFAEKLEKLAEQVLDLLCENLGLEKGYLKMAFAGTTTGLPTFGTKVSNYPPCPRPELFKGLRAHTDAGGLILLFQDDRVAGLQLLKDGEWVDVPPM 210          
The following BLAST results are available for this feature:
BLAST of CF834075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ACCO1_SOLLC7.120e-2529.491-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCO4_SOLLC1.214e-2429.491-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCH2_ARATH2.072e-2432.341-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
G2OX8_ARATH3.534e-2435.29Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
ACCO1_DORSP6.027e-2430.091-aminocyclopropane-1-carboxylate oxidase 1 OS=Dor... [more]
ACCO1_CUCME7.872e-2428.701-aminocyclopropane-1-carboxylate oxidase 1 OS=Cuc... [more]
ACCH1_ARATH1.028e-2331.481-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
GAOX1_ORYSJ1.343e-2329.30Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. ja... [more]
ACCO_DIACA1.754e-2329.09Probable 1-aminocyclopropane-1-carboxylate oxidase... [more]
ACCO_PERAE2.991e-2328.771-aminocyclopropane-1-carboxylate oxidase OS=Perse... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834075 ID=CF834075; Name=CF834075; organism=Citrus sinensis; type=EST; length=774bp
CGGGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGCCAAGAATCC
GGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCACCCC
TCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATGCAA
AGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAGCCAAGCTCGACTT
CGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGAGCA
CAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAATCTC
AGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAGGAGATATGGAAGG
ATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGGCTG
ACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAGGAAACCACATTTA
TTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTCAAT
GGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAAATGGGAGAAGTGT
TAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGACTGCAA
GGAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGTTAT
GGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACCATTCTGCTACAAC
TTAATGAAGTGGAGGGTCTCCAGGTAAAGAAGGATGGAAAGTGGATTCCT
GTTACCCCACTCCCGGATGCTTTC
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