CF834075

Overview
NameCF834075
Unique NameCF834075
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 9.007e-20
Identity = 70/246 (28.46%), Postives = 119/246 (48.37%), Query Frame = 1
Query:   61 VPDRYIRPDQDSPLIS----DDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVH-LRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMR-----EFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDG-KWIPVTPLP 765
            +PD Y    +D  L S           IP+ID+   H + +      ++   C+ WG FQ+ NHG+    L+ ++      F L ++ K K  +    + G+G A + S   K  W++ F++   P++  RK  L+P+   +  + +E Y   +K LA  L+      L + +E++               +++N+YP CP+P++ MGL+ H+D+  LTIL Q N   GLQV +D   W+ V P P
Sbjct:   30 LPDSYKWTPKDDLLFSAAPSPPATGENIPLIDLD--HPDATN-----QIGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQMWSEGFTITGSPLNDFRK--LWPQHHLNYCDIVEEYEEHMKKLASKLMWLALNSLGVSEEDIEWASLSSDLNWAQAALQLNHYPVCPEPDRAMGLAAHTDSTLLTILYQ-NNTAGLQVFRDDLGWVTVPPFP 265          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.006e-19
Identity = 77/275 (28.00%), Postives = 127/275 (46.18%), Query Frame = 1
Query:   19 VPCVQELAKNP-------ALVVPDRYIRPD-QDSPLISDDTL---ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWAD--LFSMMTLPVHLRKPHLFPKLPPSLRE---TLEVYSMELKTLAENLISKMGEVLNIKDEEM------REFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDG--KWIPVTPLPDA 771
            +P    L+K+P       A  VP+ +  P   D P++           +PV+DM+   + E++           ++WG F L  HG+    L  ++  + G F L   EK +  +RPGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E++ LA+ L+      L +  E++       +  E     M +N+YP CP P++ +GL  H+D+   T +LQ + V GLQ+ + G  +W+ V  +P A
Sbjct:    1 MPTPSHLSKDPRYFDFRAARRVPETHAWPGLHDHPVVDGSGAGGGPDAVPVVDMRDPCAAEAVA-------LAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ-SLVPGLQLFRHGPDRWVTVPAVPGA 265          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.621e-19
Identity = 65/229 (28.38%), Postives = 109/229 (47.60%), Query Frame = 1
Query:  112 DTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF-------ENGLQG-MRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQV----KKDGKWIPVTPL 762
            +T    IPVI +       S   E   L   C+EWG F + +HG+S + L  +  +++  F+L M  K    + P +  G+G   +     KL W++ FS+M   +      L+P         +E Y   +  L+  LIS +   L +  E++            + +Q  +++N YP CP P   MGL+PH+D++ LTIL Q N + GL++    ++  +WI V P+
Sbjct:   41 ETTSGPIPVISL-------SNPEEHGLLRQACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDLGWLVPDKTGSGTDSIQSFLQLNSYPVCPDPHLAMGLAPHTDSSLLTILYQGN-IPGLEIESPQEEGSRWIGVEPI 261          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.621e-19
Identity = 64/217 (29.49%), Postives = 109/217 (50.23%), Query Frame = 1
Query:  145 MQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDM--EGFGQAFVVSEEQ----KLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGM-----RMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPL 762
            M+ L      D+ +A L   C+ WGFF+L+NHG+S    E+ +        ++ E  +++++R  +   + F    + S E      LDW   F +  LP         P L      T++ +++ L+ LAE L+  + E L ++   ++  F  G  G+     +++ YPPCP+PE + GL  H+DA  + +L Q + V GLQ+ KD +WI V P+
Sbjct:    1 MELLEGSRRSDA-MAVLRDACENWGFFELLNHGISHEPNEQSE-------TVNKEHYREHYRRFREQRFKEFAAKTLDSGENVDGDNLDWESTFFLRHLPTS--NISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDAGGIILLFQDDTVSGLQLLKDEEWIDVPPM 207          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 9.958e-19
Identity = 69/225 (30.67%), Postives = 111/225 (49.33%), Query Frame = 1
Query:  121 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYW--QRPGDMEGFGQAFVVSEEQKLDWADLFSMMT-LPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQG----MRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDAF 774
            +  +P+ID+ S   +E   S L       KE GFFQ+VNHG+S   +  ++   E FF+L   +K   +  +R      F  A   +  +K  W D   +    PV     + +P  P  LR+ +E ++ + + + + L+  + E + I+     ++FE  L G    + +N+YP CP P+K +G  PH D   +T+LL    V GL+V   G WI V P P+AF
Sbjct:   32 VVSLPIIDL-SCGRDEVRRSILE----AGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSGATYDTGGEKY-WRDCLRLACPFPVD-DSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQ----ADYFEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLP-GAVNGLEVSYKGDWIKVDPAPNAF 244          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: G3OX4_ARATH (Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.958e-19
Identity = 70/245 (28.57%), Postives = 116/245 (47.35%), Query Frame = 1
Query:   55 LVVPDRYIRPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLI-SKMGEV-LNIKDEEMREFFEN-----GLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQV-KKDGKWIPVTPLP 765
            L   D  +RP   S  +S D +   IPVID+       S       +    K WG FQ+ NHG+S   L+ ++   +  F++  E K +       + G+G+  +    +K  W++ F++           L+P         ++ Y  E++ LA  L+   +G + + ++D E     E      G   +R+N+YP CP+PE+ MGL+ H+D+  LTIL Q N   GLQV +++  W+ V P P
Sbjct:   27 LTAADSLLRP---SSAVSFDAVEESIPVIDL-------SNPDVTTLIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSN-TGGLQVFREESGWVTVEPAP 260          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.218e-18
Identity = 67/222 (30.18%), Postives = 104/222 (46.85%), Query Frame = 1
Query:  121 ISQIPVIDMQSL-HSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDME-GFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPK---LPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            +  IP ID+  +  S    +S +AK+    +++GFFQ +NHG+    +EK+   +  F +   E +K ++ R    +  +     + E     W D  S +  P         PK   LP    E +  YS E+  LAE +   + E L +    ++E        M  + +PPCP+P +  G + H+D + LTILL  N   GLQV  DG WI V P P+A
Sbjct:   52 VVMIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAPD-------VPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDCAKGLWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVLYDGYWIDVPPNPEA 265          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17
Identity = 66/226 (29.20%), Postives = 107/226 (47.35%), Query Frame = 1
Query:  124 SQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKL---PPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF---ENGLQGMRMNYYPPCPQPEK-------VMGLSPHSDAAALTILLQLNEVEGLQVK-KDGKWIPVTP 759
            S IPVIDM    S+ ++          C+++GFF+++NHG+S   +  L+ E   FF+L   EK    Q  G   G+G +  +     + W + + +M          LFP L   P + R  LE Y+  ++ +  +++ K+ + L IK           +N    +R+N+YPPCP   K       V+G   H+D   +++ L+ N   GLQ+   DG WI V P
Sbjct:   16 SLIPVIDMSDPESKHALVK-------ACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKT---QVAGYPFGYGNS-KIGRNGDVGWVE-YLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQIISV-LRSNNTSGLQINLNDGSWISVPP 228          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.184e-17
Identity = 62/219 (28.31%), Postives = 109/219 (49.77%), Query Frame = 1
Query:  127 QIPVIDMQSLHSEESMDSELAKLDFVC--KEWGFFQLVNHGMSTAFLEKLKKEVEGFFN--LSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQVKKDGKWIPVTPLPDA 771
            ++PVID+  L S E +  +      V   KEWGFFQ+VNHG+     E +  E +  F+   S++ ++++     +   +G     S  Q    ++ F ++     L +         +LR  +E Y  E+  +A+ +   +G+ +N+  E     FE     +R+N Y P     +V GL PH+D + LTIL Q +++ GL+++ +G+WI V P  +A
Sbjct:   39 KLPVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQ-YSVSEAFHII-----LSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQ-DQIGGLELENNGQWISVKPCLEA 250          
BLAST of CF834075 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.890e-16
Identity = 68/225 (30.22%), Postives = 111/225 (49.33%), Query Frame = 1
Query:  130 IPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWAD---LFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQG---MRMNYYP---PCPQPEKVMGLSPHSDAAALTILLQLNEVEGLQV-KKDGKWIPVTPLPDAF 774
            IPVID+    ++    +++ K    C+E+GFF+++NHG+    L +L++E   FF L    K K    P D  G+G    +     L W +   L + + L  H +   +F   P   RE +E Y  E+K ++   +  + E L I+ +E         +    +RMN+YP     P  E++ G   H+D   ++ LL+ N+ EGLQ+  KDG W+ VTP   +F
Sbjct:   27 IPVIDL----TDSDAKTQIVK---ACEEFGFFKVINHGVRPDLLTQLEQEAINFFALHHSLKDK--AGPPDPFGYGTK-RIGPNGDLGWLEYILLNANLCLESH-KTTAIFRHTPAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEI-GFGEHTDPQLIS-LLRSNDTEGLQICVKDGTWVDVTPDHSSF 238          
The following BLAST results are available for this feature:
BLAST of CF834075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
G3OX1_ARATH9.007e-2028.46Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G3O21_WHEAT2.006e-1928.00Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aes... [more]
G3OX3_ARATH2.621e-1928.38Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
ACCO_DENCR2.621e-1929.491-aminocyclopropane-1-carboxylate oxidase OS=Dendr... [more]
IDS3_HORVU9.958e-1930.672'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
G3OX4_ARATH9.958e-1928.57Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis th... [more]
GSL_ARATH2.218e-1830.18Probable 2-oxoacid dependent dioxygenase OS=Arabid... [more]
G2OX1_ARATH1.878e-1729.20Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
G2OX7_ARATH4.184e-1728.31Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis th... [more]
G2OX3_ARATH7.890e-1630.22Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834075 ID=CF834075; Name=CF834075; organism=Citrus sinensis; type=EST; length=774bp
CGGGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGCCAAGAATCC
GGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCACCCC
TCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACATGCAA
AGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAGCCAAGCTCGACTT
CGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATGAGCA
CAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAATCTC
AGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAGGAGATATGGAAGG
ATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGGGCTG
ACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAGGAAACCACATTTA
TTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACTCAAT
GGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAAATGGGAGAAGTGT
TAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGACTGCAA
GGAATGAGGATGAATTATTACCCTCCATGTCCTCAGCCCGAGAAGGTTAT
GGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACCATTCTGCTACAAC
TTAATGAAGTGGAGGGTCTCCAGGTAAAGAAGGATGGAAAGTGGATTCCT
GTTACCCCACTCCCGGATGCTTTC
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