CF834076

Overview
NameCF834076
Unique NameCF834076
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:171..913. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI2_MEDSA (Chalcone--flavonone isomerase 2 (Fragment) OS=Medicago sativa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.596e-45
Identity = 96/182 (52.75%), Postives = 125/182 (68.68%), Query Frame = -1
Query:  216 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPXXXXXXXXXXXXLT-ISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 758
            AGERGL IEG F+ FTAIGVYLE+ AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L G +YS KV ENC+A  K  G Y DAEA+A++KF   FK   FPP            +  +SFS D SIP+   A+IEN  +S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:    8 AGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 189          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI1_MEDSA (Chalcone--flavonone isomerase 1 OS=Medicago sativa GN=CHI1 PE=1 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.596e-45
Identity = 96/182 (52.75%), Postives = 125/182 (68.68%), Query Frame = -1
Query:  216 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPXXXXXXXXXXXXLT-ISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 758
            AGERGL IEG F+ FTAIGVYLE+ AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L G +YS KV ENC+A  K  G Y DAEA+A++KF   FK   FPP            +  +SFS D SIP+   A+IEN  +S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:   33 AGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 214          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI1_LOTJA (Chalcone--flavonone isomerase 1 OS=Lotus japonicus GN=CHI1 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.746e-44
Identity = 93/182 (51.10%), Postives = 123/182 (67.58%), Query Frame = -1
Query:  216 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPXXXXXXXXXXXXLT-ISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 758
            AGERGL IEGKF+ FT IGVYLE+ AV  LA KWKGK+++EL +S++FFRD+++ P EK ++ + + PL G +YS KV ENC+A  K  G Y +AEA AIEKF   F+   FPP               +SFS D +IP++   VIEN  LSEAVLE+MIG++ VSP  K+ LAER+  ++N
Sbjct:   37 AGERGLTIEGKFIKFTGIGVYLEDTAVDSLATKWKGKSSQELQDSLDFFRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSAGTYGEAEATAIEKFAEAFRKVDFPPGSSVFYRQSTDGKLGLSFSLDDTIPEEEAVVIENKALSEAVLETMIGEHAVSPDLKRCLAERLPIVMN 218          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI3_LOTJA (Chalcone--flavonone isomerase 3 OS=Lotus japonicus GN=CHI3 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.302e-43
Identity = 90/182 (49.45%), Postives = 122/182 (67.03%), Query Frame = -1
Query:  216 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPXXXXXXXXXXXXLT-ISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 758
            AGERGL IEGKF+ FT +GVYLE+  V  LA KWKGK+++EL +S++F+RD+++ P EK ++ + + PL G +YS KV ENC+A  K  G Y +AEA AI KF   F++  FPP               +SFS D ++P+    VIEN  LSEAVLE+MIG++ VSP  K+ LAER+ A+LN
Sbjct:   36 AGERGLTIEGKFIKFTGLGVYLEDKTVDSLATKWKGKSSQELLDSLDFYRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSTGTYGEAEAAAIGKFAEAFRNLDFPPGSSVFYRQSPDGELGLSFSPDDTLPEKEAVVIENKALSEAVLETMIGEHAVSPDLKRCLAERLPAVLN 217          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CF1B1_SOYBN (Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.360e-41
Identity = 91/176 (51.70%), Postives = 119/176 (67.61%), Query Frame = -1
Query:  234 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPXXXXXXXXXXXXLT-ISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 758
            AG RGL I+ +FV FT IGVYLE+ AV  LA KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPP               +SFSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:   35 AGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 210          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CF1B2_SOYBN (Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.259e-41
Identity = 90/176 (51.14%), Postives = 119/176 (67.61%), Query Frame = -1
Query:  234 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPXXXXXXXXXXXXLT-ISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 758
            AG RGL I+ +FV FT IGVYLE+ AV  L  KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y++AE KAIE+F   FKD+ FPP               +SFSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:   35 AGVRGLNIQEEFVKFTGIGVYLEDKAVSSLGAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMESVGTYSEAEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 210          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI2B_SOYBN (Chalcone--flavonone isomerase 2-B OS=Glycine max GN=CHI2-B PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.530e-40
Identity = 90/177 (50.85%), Postives = 118/177 (66.67%), Query Frame = -1
Query:  234 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPP--XXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAER 758
            AG RGL I+ +FV FT IGVYLE+ AV  LA KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPP                + FSKD +IP+   AVI+N  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:   35 AGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGQLIFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 211          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI1_SOYBN (Chalcone--flavonone isomerase 1 (Fragment) OS=Glycine max GN=CHI1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.692e-39
Identity = 85/163 (52.15%), Postives = 112/163 (68.71%), Query Frame = -1
Query:  231 FTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPXXXXXXXXXXXXLT-ISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERI 716
            +T IGVYLE+ AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F P            +  +SFS+D +IP+   AVIEN  +S AVLE+MIG++ VSP  K+ LA R+
Sbjct:    1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGPLFLYRQSPDGILGLSFSEDVTIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRILASRL 163          
BLAST of CF834076 vs. ExPASy Swiss-Prot
Match: CFI_PEA (Chalcone--flavonone isomerase OS=Pisum sativum GN=CHI PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.688e-36
Identity = 88/182 (48.35%), Postives = 115/182 (63.19%), Query Frame = -1
Query:  216 AGERGLEIEGKFVNFTAIGVYLEENAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLIGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFP-PXXXXXXXXXXXXLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSPAAKKSLAERISALLN 758
            AGERGL I G F+ FT IGVYLE+ A   LA KW+GK  EEL E+++F+RD+++GPFEK ++ + I  L G +YS KV ENC+A  K  G Y DAE +AI+    + +  IF               L +S SKD SIP+   A+IEN   S AVLE+MIG++ VSP  K+ LA R+ ALLN
Sbjct:   35 AGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKL-EELLETLDFYRDIISGPFEKLIRRSKIKELSGPEYSRKVMENCVAHLKSVGTYGDAEVEAIQNLQKLSRMLIFHLVLLKKNRQSPDGILGLSSSKDISIPEKEDAIIENKAASSAVLETMIGEHAVSPDLKRCLAARLPALLN 215          
The following BLAST results are available for this feature:
BLAST of CF834076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI2_MEDSA4.596e-4552.75Chalcone--flavonone isomerase 2 (Fragment) OS=Medi... [more]
CFI1_MEDSA4.596e-4552.75Chalcone--flavonone isomerase 1 OS=Medicago sativa... [more]
CFI1_LOTJA1.746e-4451.10Chalcone--flavonone isomerase 1 OS=Lotus japonicus... [more]
CFI3_LOTJA4.302e-4349.45Chalcone--flavonone isomerase 3 OS=Lotus japonicus... [more]
CF1B1_SOYBN2.360e-4151.70Chalcone--flavonone isomerase 1B-1 OS=Glycine max ... [more]
CF1B2_SOYBN5.259e-4151.14Chalcone--flavonone isomerase 1B-2 OS=Glycine max ... [more]
CFI2B_SOYBN1.530e-4050.85Chalcone--flavonone isomerase 2-B OS=Glycine max G... [more]
CFI1_SOYBN1.692e-3952.15Chalcone--flavonone isomerase 1 (Fragment) OS=Glyc... [more]
CFI_PEA8.688e-3648.35Chalcone--flavonone isomerase OS=Pisum sativum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834076 ID=CF834076; Name=CF834076; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTTTTTTTTTGGTCGGGACATCAACATTCGTAAATTAACCCTT
AATTTGGGAGCTCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAG
GAAAGGACACTAATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACA
ACTCTGCCTTCGCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCAT
CTTATCACTAGTTACATTCAACAGTGCTGATATTCTTTCAGCCAAACTCT
TCTTTGCTGCAGGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACT
GCCTCAGAAAGCAAATTATTCTCTATTACCGCAACACCATCTTTCGGTAT
TGAACCGTCTTTGGAGAAGCTGATAGTCAATGATCCTGATGATTGACTAA
AGAGAATTGAGGATCCTGGTGGGAAAATTTCATCCTTGAAGACCGCAGTG
AATTTTTCAATAGCTTTGGCTTCAGCATCTGTGTAAATTCCAAAAAACTT
CCATATGGCCATGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCACCAA
TTAATGGCAAGATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTG
ACGACGTCTCTGAAGAACTCAACGGATTCCGTCAACTCCTCCGCAGTCTT
CCCCTTCCATTTGCCGGCGAGTAACGGCACGGCGTTCTCCTCCAAGTACA
CTCCTATCGCCGTGAAATTCACGAACTTCCCTTCAATCTCCAATCCTCTC
TCCCCTGC
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