CF834077

Overview
NameCF834077
Unique NameCF834077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 285.034 bits (728), Expect = 2.363e-76
Identity = 145/198 (73.23%), Postives = 166/198 (83.84%), Query Frame = 1
Query:   82 PSVTELQVENVTFTPSL-QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFT-QSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            PSVT LQVENV F P+L +PP S  + FLGGAGERGL I+ KFVKFTAIG+YL++ AVP L+ KWKGK  +ELTESV+FF+D+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF +VFKD+ FPPGSSILFT    GSL ISFSKDGSIP+   AVI+N LLSEAVLESMIG +GVSP
Sbjct:    4 PSVTALQVENVAFPPTLIKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1_ARATH (Chalcone--flavonone isomerase 1 OS=Arabidopsis thaliana GN=CHI1 PE=2 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 2.363e-76
Identity = 141/200 (70.50%), Postives = 168/200 (84.00%), Query Frame = 1
Query:   73 NPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +P P+VT+L V++VTF PS++ P S+   FLGGAG RGL+I+GKFV FT IGVYLE NAVP LS KWKGKT EELTES+ FF+++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  G+YTD EAKA+EKF  +FK+E FPPGSSILF  S +GSLT++FSKD SIP+ G+AVIEN LL+EAVLES+IGKNGVSP
Sbjct:   11 SPFPAVTKLHVDSVTFVPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSKDDSIPETGIAVIENKLLAEAVLESIIGKNGVSP 210          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 5.819e-75
Identity = 142/201 (70.65%), Postives = 164/201 (81.59%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M+P  SVT++QVEN  F P++ P GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P L+ KWKGKT +ELT+SVEFF+DVVTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTD E +AIEKF  VF+ E FPPG+SI+FTQS  G LTISF+KD S+     AVIEN  LSEAVLES+IGK+GVSP
Sbjct:    1 MSPPVSVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI3_PETHY (Chalcone--flavonone isomerase C OS=Petunia hybrida GN=CHI3 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.888e-74
Identity = 141/201 (70.15%), Postives = 163/201 (81.09%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M+P  SVT++QVEN  F P++ P GST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P L+ KWKGKT +ELT+SVEFF+DVVTGPFEKF +VT ILPLTG QYSEKVAENC+A WK  G YTD E +AIEKF  VF+ E FPPG+SI+FTQS  G LTISF+KD S+     AVIEN  LSEAVLES+IGK+GVSP
Sbjct:    1 MSPPVSVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTTILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_CLITE (Chalcone--flavonone isomerase OS=Clitoria ternatea GN=CHI PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 3.772e-74
Identity = 140/196 (71.43%), Postives = 164/196 (83.67%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S+T ++V+NV F P+++PP S  + FLGGAG RGL+IE KFVKFTAIG+YL ++A+P L+ KW GK+  ELTESVEFF+D+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTDAEAKAI+KF +VFKDE FPPGSSILFT S  GSL I+FSKDGS       VIEN LLSEAVLESMIGK+GVSP
Sbjct:    6 SLTAVEVDNVVFPPAVKPPSSADTFFLGGAGVRGLQIEDKFVKFTAIGIYLHDDALPFLAAKWNGKSDHELTESVEFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIDKFVSVFKDETFPPGSSILFTVSPKGSLGITFSKDGST----TTVIENKLLSEAVLESMIGKHGVSP 197          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 8.403e-74
Identity = 139/197 (70.56%), Postives = 164/197 (83.25%), Query Frame = 1
Query:   82 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            PS+TE+QVE+V F P+++PPGS K+ FLGGAG RGLEIEGKF+KFTAIGVYLE +AV  L+ KWKGKTAEE+ +S +FF ++VTGPFEKF KVT ILPLTG QYSEKV ENC+A WK  G +TDAE +A +KF  VFK+E+F PG+SILFTQS  GSLTISFSKDGSIP+   A+IEN  LSEAVLES+IGK GVSP
Sbjct:    5 PSITEVQVESVVFPPAVKPPGSDKTFFLGGAGVRGLEIEGKFIKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLTISFSKDGSIPEKENAIIENKQLSEAVLESIIGKKGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2_CHRMO (Chalcone--flavonone isomerase 2 OS=Chrysanthemum morifolium GN=CHI2 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.585e-72
Identity = 133/196 (67.86%), Postives = 158/196 (80.61%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S T L VEN+ F  S++PPG T + FLGGAG RG+EI+G FVKFT IGVYLE+ A+PLL+GKWKGKTAEEL  SVEFF+D+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   I+KF  VFKDE FPPG+SILFT S  GSLTISFSKDG IP+    V+EN  L++AV+ES+IGKNGVSP
Sbjct:    6 SATSLNVENIVFPSSVKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1_CHRMO (Chalcone--flavonone isomerase 1 OS=Chrysanthemum morifolium GN=CHI1 PE=2 SV=2)

HSP 1 Score: 272.322 bits (695), Expect = 1.585e-72
Identity = 133/196 (67.86%), Postives = 158/196 (80.61%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S T L VEN+ F  S++PPG T + FLGGAG RG+EI+G FVKFT IGVYLE+ A+PLL+GKWKGKTAEEL  SVEFF+D+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   I+KF  VFKDE FPPG+SILFT S  GSLTISFSKDG IP+    V+EN  L++AV+ES+IGKNGVSP
Sbjct:    6 SATSLNVENIVFPSSVKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_RAPSA (Chalcone--flavonone isomerase OS=Raphanus sativus GN=CHI PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 7.865e-72
Identity = 137/200 (68.50%), Postives = 163/200 (81.50%), Query Frame = 1
Query:   73 NPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +P P+  +LQV++VTF PS+  P S+ + FLGGAG RGLEI+GKFV FT IGVYL+  +VP LS KW+GKT EELTESV FF+++V G FEKF+KVTM LPLTG QYSEKV ENC+AIWK  GIYTD+EAKA+E+F  VFKDE FPPG+SILF  S  GSLT++FSKD SIP+ G AVIEN LL+EAVLES+IGKN VSP
Sbjct:    8 SPLPTAPKLQVDSVTFPPSVISPASSNTLFLGGAGVRGLEIQGKFVIFTVIGVYLDPVSVPSLSVKWEGKTTEELTESVPFFREIVIGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDSEAKAVERFLEVFKDETFPPGASILFALSPEGSLTVAFSKDDSIPETGKAVIENKLLAEAVLESIIGKNRVSP 207          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_DIACA (Chalcone--flavonone isomerase OS=Dianthus caryophyllus GN=CHI PE=2 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 7.865e-72
Identity = 134/195 (68.72%), Postives = 164/195 (84.10%), Query Frame = 1
Query:   88 VTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +T++QVE+  F P ++PPGS K+ FLGGAG RGLEI+GKF+KFTAI VY+E++AV  L+ KWKGKTA+ELT+SV+FFKD+VTGPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAE++A +KF  VFK+   PPG+SILFTQS  GSLTISFSKDGS+P++G  VI N  LSEAVL+S+IGK+GVSP
Sbjct:    4 ITQIQVESHVFPPEVKPPGSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAVKWKGKTADELTDSVDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGTYTDAESEATQKFLQVFKNVSNPPGASILFTQSPLGSLTISFSKDGSLPENGKEVIVNKQLSEAVLQSIIGKHGVSP 198          
The following BLAST results are available for this feature:
BLAST of CF834077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI2_LOTJA2.363e-7673.23Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]
CFI1_ARATH2.363e-7670.50Chalcone--flavonone isomerase 1 OS=Arabidopsis tha... [more]
CFI1_PETHY5.819e-7570.65Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI3_PETHY2.888e-7470.15Chalcone--flavonone isomerase C OS=Petunia hybrida... [more]
CFI_CLITE3.772e-7471.43Chalcone--flavonone isomerase OS=Clitoria ternatea... [more]
CFI_VERHY8.403e-7470.56Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI2_CHRMO1.585e-7267.86Chalcone--flavonone isomerase 2 OS=Chrysanthemum m... [more]
CFI1_CHRMO1.585e-7267.86Chalcone--flavonone isomerase 1 OS=Chrysanthemum m... [more]
CFI_RAPSA7.865e-7268.50Chalcone--flavonone isomerase OS=Raphanus sativus ... [more]
CFI_DIACA7.865e-7268.72Chalcone--flavonone isomerase OS=Dianthus caryophy... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_04N21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834077 ID=CF834077; Name=CF834077; organism=Citrus sinensis; type=EST; length=670bp
CAAAATCTCTTCCTCTTAAAAATTAAGTCTTAAACACACACGTGAAATTA
ATCAAAAATGCTGTCACCGATGAATCCCTCACCGTCCGTCACCGAACTGC
AGGTCGAGAACGTCACTTTCACGCCGTCCCTGCAACCTCCAGGATCAACA
AAGTCGCATTTCCTCGGCGGCGCAGGGGAGAGAGGATTGGAGATTGAAGG
GAAGTTCGTGAAGTTCACGGCGATAGGAGTGTACTTGGAGGAGAACGCCG
TGCCGTTACTCTCCGGCAAATGGAAGGGGAAGACTGCGGAGGAGTTGACG
GAATCCGTTGAGTTCTTCAAAGACGTCGTCACAGGTCCCTTTGAGAAATT
CATGAAGGTGACAATGATCTTGCCATTAACTGGTGCACAATACTCAGAGA
AGGTTGCCGAAAATTGCATGGCCATATGGAAGTTTTTTGGAATTTACACA
GATGCTGAAGCCAAAGCTATTGAAAAATTCACTGCGGTCTTCAAGGATGA
AATTTTCCCACCAGGATCCTCAATTCTCTTTACTCAATCATCAGGATCAT
TGACTATCAGCTTCTCCAAAGACGGTTCAATACCGAAAGATGGTGTTGCG
GTAATAGAGAATAATCTGCTTTCTGAGGCAGTACTGGAGTCGATGATCGG
CAAGAATGGTGTTTCTCCTG
back to top