CF834077

Overview
NameCF834077
Unique NameCF834077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:1..669. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_SAUME (Chalcone--flavonone isomerase OS=Saussurea medusa GN=CHI PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.342e-71
Identity = 131/201 (65.17%), Postives = 163/201 (81.09%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M P PS T +QVE++ F PS++PPG+T + FLGGAG RG+EI+G FVKFT IGVYLE+ A+P L+ KWKGKTA ELT+SV+F++D+VTGPFEKF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   IEKF  VFKDE F PGSSILFT S +GSLTISFSKDG+IP+    V+EN  L++ V+ES+IG++GVSP
Sbjct:    1 MAPPPSSTSIQVESIVFPPSVKPPGATTTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPSLAVKWKGKTAAELTDSVQFYRDIVTGPFEKFSQVTMILPLTGKQYSEKVSEMCIGVWKAQGTYTDADTATIEKFLEVFKDENFLPGSSILFTTSPTGSLTISFSKDGNIPEAATVVLENRKLAQTVIESVIGEHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora GN=CHI PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.342e-71
Identity = 136/195 (69.74%), Postives = 158/195 (81.03%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            SVTE++VE+  F PS++PP STKS  LGGAG RGLEI G FVKFTAIGVYLEE+ V +LSGKWKGKTAEEL++SVEFF D++TGPFEKF +VT+ILP+TG QYS KVAENC A WK  GIYTDA+  AIEKF  VF+ E F PG SILFT S  SLTISF K+G+IP+   AVIEN  LSEAV+ES+IG+ GVSP
Sbjct:    8 SVTEVKVESYVFPPSVKPPSSTKSFLLGGAGVRGLEINGNFVKFTAIGVYLEESGVAVLSGKWKGKTAEELSDSVEFFTDIITGPFEKFTQVTLILPVTGQQYSPKVAENCAAQWKAAGIYTDADGIAIEKFLQVFQTESFTPGDSILFTHSPESLTISFGKNGAIPEVSNAVIENKKLSEAVIESIIGEKGVSP 202          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_CALCH (Chalcone--flavonone isomerase (Fragment) OS=Callistephus chinensis GN=CHI PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.903e-71
Identity = 134/199 (67.34%), Postives = 159/199 (79.90%), Query Frame = 1
Query:   76 PSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            P+P  T LQVE++ F  S++PPGST S FLGGAG RG+EI+G FVKFT IGVYLE+ A+PLL+ K KGKT  EL +SVEFF+D+VTGPFEKF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   IEKF  VFKDE F PGSSILFT S  GSLTISFSKDG+IP+    V+EN  L++AV+ES+IGKNGVSP
Sbjct:    3 PTPLTTGLQVESIVFPSSVKPPGSTNSLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAAKRKGKTVAELLDSVEFFRDIVTGPFEKFTQVTMILPLTGKQYSEKVSEMCVGVWKALGTYTDADGTTIEKFLEVFKDENFLPGSSILFTTSPLGSLTISFSKDGTIPEAANVVLENEKLAQAVIESVIGKNGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_IPOBA (Chalcone--flavonone isomerase OS=Ipomoea batatas GN=CHI PE=2 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.098e-71
Identity = 133/201 (66.17%), Postives = 163/201 (81.09%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M+  P V E++VE+  F  + +PPG+ K+  LGGAG RGL I+GKFVKFTAIGVYLE +AVP L+ KW GK+AEELT+SV+FF+D+VTGPFEK  ++TMILPL+G QYSEKV+ENC+A WK  G+Y DAE+KAIEKF  VF D++FPPG+SI FTQS  GSLTISFSK+GS+P+   AVIEN  LSEAVLES+IG  GVSP
Sbjct:    1 MSAPPCVAEVKVESYVFPATAKPPGTAKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAVKWNGKSAEELTDSVQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVSENCVAFWKAAGMYGDAESKAIEKFNDVFSDQMFPPGASIFFTQSPHGSLTISFSKEGSMPEIASAVIENKPLSEAVLESIIGSKGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2_PETHY (Chalcone--flavonone isomerase B OS=Petunia hybrida GN=CHI2 PE=3 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 5.098e-71
Identity = 136/201 (67.66%), Postives = 164/201 (81.59%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M+PS SVT++QVEN  F P+++PP STK+ FLGGAG RGL++EGKFVKFT IGVYLEE+AV  L+ KWKGK+AEEL  SV+FF+D+VTGPFEKF +V  ILPLTG Q+SEKVAENC+A WK  G Y+DA ++AIEKF  V K E F PG+SILFTQS  GSLTISF+KD SI + G AVIEN   SEAVLE++IG++GVSP
Sbjct:    1 MSPSVSVTKVQVENYVFPPTVKPPASTKTLFLGGAGHRGLDVEGKFVKFTVIGVYLEESAVQFLAPKWKGKSAEELIHSVDFFRDIVTGPFEKFTRVRFILPLTGKQFSEKVAENCVAHWKATGTYSDAGSRAIEKFLNVVKSETFLPGASILFTQSPLGSLTISFTKDDSISEAGNAVIENKQFSEAVLETIIGEHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_IPOPU (Chalcone--flavonone isomerase OS=Ipomoea purpurea GN=CHI PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.136e-70
Identity = 131/201 (65.17%), Postives = 162/201 (80.60%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M+  P V E++VE+  F  +++PPG+ K+  LGGAG RGL I+GKFVKFTAIGVYLE +AVP L+ KW GK+ EELT+SV+FF+D+VTGPFEK  ++TMILPL+G QYSEKV ENC+A WK  G+Y DAE+KAI+KF  VF D++FPPG+SI FTQS  GSLT+SFSKDGS+P+   AVIEN  LSEAVLES+IG  GVSP
Sbjct:    1 MSAPPCVAEVKVESYVFPATVKPPGTAKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAVKWNGKSVEELTDSVQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVTENCVAFWKAAGMYGDAESKAIDKFNDVFSDQMFPPGASIFFTQSPLGSLTVSFSKDGSMPEIASAVIENKPLSEAVLESIIGSKGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_EUSGR (Chalcone--flavonone isomerase OS=Eustoma grandiflorum GN=CHI PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 9.614e-70
Identity = 131/200 (65.50%), Postives = 155/200 (77.50%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M P  SV+E+QVE+  F P++ PP STKS  LGGAG RGLEI G FVKFTAIG+YL+E A+P L+GKWKGKTAEEL +SV+FF D++TGPFEKF +VT+ILPLTG QYS KV+ENC A WK  G+YT A+ KAIEKF  VF+ + F PG SILF  S  SLTISF K G IP+   AVIEN  LSEAV+ES+IG+ GVSP
Sbjct:    1 MAPPVSVSEVQVESYLFPPTITPPASTKSFLLGGAGVRGLEIGGNFVKFTAIGIYLDETAIPWLAGKWKGKTAEELADSVDFFADIITGPFEKFTQVTLILPLTGQQYSGKVSENCTAQWKAAGVYTPADGKAIEKFLQVFEPQSFSPGDSILFMHSPESLTISFGKAGDIPETSNAVIENKKLSEAVIESVIGEKGVSP 200          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_ALLCE (Chalcone--flavonone isomerase OS=Allium cepa GN=CHI PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 9.614e-70
Identity = 128/196 (65.31%), Postives = 156/196 (79.59%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +VT+L VE   F   + PPGS+K+HFLGGAG RGLEI GKF+ FTAIG+YLE +++P L+ KWKGKT EEL  S++FF+D+ TGPFEKF  VTMILPLTG QYSEKV ENC+A WK  GIYTDAEA A++KF   FK E FPPGSSILFT + SG+L I+FSKDGS+ KD   +IEN  L++AVLES+IG++GVSP
Sbjct:    3 AVTKLDVEGTAFDSVIIPPGSSKTHFLGGAGVRGLEIGGKFIAFTAIGIYLETDSIPFLADKWKGKTGEELAGSLDFFRDICTGPFEKFTNVTMILPLTGEQYSEKVTENCVAYWKAIGIYTDAEASAVDKFKQAFKPESFPPGSSILFTHTPSGTLKIAFSKDGSVSKDEGVLIENKALTQAVLESIIGEHGVSP 198          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 9.614e-70
Identity = 137/197 (69.54%), Postives = 160/197 (81.22%), Query Frame = 1
Query:   82 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            PSVT + VENVTF P+++PP S  + FL GAG RGL+I   FVKFTAI VYL+ +A+  LS KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF +VFKD  FPPGSSILFT S +GSLTISFS D +IP+   AVIEN LLSEAVLESMIGKNGVSP
Sbjct:    4 PSVTSVTVENVTFPPTVKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSP 200          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.256e-69
Identity = 136/197 (69.04%), Postives = 160/197 (81.22%), Query Frame = 1
Query:   82 PSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            PSVT + VENVTF P+++PP S  + FL GAG RGL+I   FVKFTAI +YL+ +A+  LS KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF +VFKD  FPPGSSILFT S +GSLTISFS D +IP+   AVIEN LLSEAVLESMIGKNGVSP
Sbjct:    4 PSVTSVTVENVTFPPTVKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSP 200          
The following BLAST results are available for this feature:
BLAST of CF834077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_SAUME1.342e-7165.17Chalcone--flavonone isomerase OS=Saussurea medusa ... [more]
CFI_GENTR1.342e-7169.74Chalcone--flavonone isomerase OS=Gentiana triflora... [more]
CFI_CALCH3.903e-7167.34Chalcone--flavonone isomerase (Fragment) OS=Callis... [more]
CFI_IPOBA5.098e-7166.17Chalcone--flavonone isomerase OS=Ipomoea batatas G... [more]
CFI2_PETHY5.098e-7167.66Chalcone--flavonone isomerase B OS=Petunia hybrida... [more]
CFI_IPOPU1.136e-7065.17Chalcone--flavonone isomerase OS=Ipomoea purpurea ... [more]
CFI_EUSGR9.614e-7065.50Chalcone--flavonone isomerase OS=Eustoma grandiflo... [more]
CFI_ALLCE9.614e-7065.31Chalcone--flavonone isomerase OS=Allium cepa GN=CH... [more]
CFI3_SOYBN9.614e-7069.54Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI2A_SOYBN1.256e-6969.04Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834077 ID=CF834077; Name=CF834077; organism=Citrus sinensis; type=EST; length=670bp
CAAAATCTCTTCCTCTTAAAAATTAAGTCTTAAACACACACGTGAAATTA
ATCAAAAATGCTGTCACCGATGAATCCCTCACCGTCCGTCACCGAACTGC
AGGTCGAGAACGTCACTTTCACGCCGTCCCTGCAACCTCCAGGATCAACA
AAGTCGCATTTCCTCGGCGGCGCAGGGGAGAGAGGATTGGAGATTGAAGG
GAAGTTCGTGAAGTTCACGGCGATAGGAGTGTACTTGGAGGAGAACGCCG
TGCCGTTACTCTCCGGCAAATGGAAGGGGAAGACTGCGGAGGAGTTGACG
GAATCCGTTGAGTTCTTCAAAGACGTCGTCACAGGTCCCTTTGAGAAATT
CATGAAGGTGACAATGATCTTGCCATTAACTGGTGCACAATACTCAGAGA
AGGTTGCCGAAAATTGCATGGCCATATGGAAGTTTTTTGGAATTTACACA
GATGCTGAAGCCAAAGCTATTGAAAAATTCACTGCGGTCTTCAAGGATGA
AATTTTCCCACCAGGATCCTCAATTCTCTTTACTCAATCATCAGGATCAT
TGACTATCAGCTTCTCCAAAGACGGTTCAATACCGAAAGATGGTGTTGCG
GTAATAGAGAATAATCTGCTTTCTGAGGCAGTACTGGAGTCGATGATCGG
CAAGAATGGTGTTTCTCCTG
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