CF834077

Overview
NameCF834077
Unique NameCF834077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_TOBAC (Chalcone--flavonone isomerase OS=Nicotiana tabacum GN=CHI PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.772e-69
Identity = 132/193 (68.39%), Postives = 157/193 (81.35%), Query Frame = 1
Query:   97 LQVENVTFTPSL-QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            + +EN  F  ++  PPGST + FL GAG RGLEIEGKFVKFTAIGVYLEE+A+P L+ KWK K++EEL  S++FF+D+VTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTDAE++AIEK   +F++E FPPG+SILFTQS  G+LTISF KD SI   G AVIEN  LSEAVLES+IGK+GVSP
Sbjct:    4 ITIENYVFPSTMVNPPGSTNTFFLAGAGNRGLEIEGKFVKFTAIGVYLEESALPFLAAKWKSKSSEELANSLDFFRDIVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKAIGTYTDAESQAIEKLLNIFQNETFPPGASILFTQSPVGALTISFIKDDSITGTGNAVIENKQLSEAVLESIIGKHGVSP 196          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_MAIZE (Chalcone--flavonone isomerase OS=Zea mays GN=CHI PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 3.539e-64
Identity = 123/187 (65.78%), Postives = 141/187 (75.40%), Query Frame = 1
Query:  112 VTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            V F P  +PPGS  SHFLGGAG RG+EI G F+KFTAIGVYLE+ AVP L+ KW GKTA+EL     FF+DVVTG FEKF +VTMILPLTG QY+EKV ENC+A WK  G+YTDAE  A+EKF  VFK E F PG SILFT S +G LT++FSKD S+P  G   IEN  L EAVLES+IG+ GVSP
Sbjct:   11 VVFPPVARPPGSAGSHFLGGAGVRGVEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWKAAGLYTDAEGVAVEKFREVFKPETFAPGRSILFTHSPAGVLTVAFSKDSSVPAAGGVAIENKRLCEAVLESIIGERGVSP 197          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_ORYSJ (Chalcone--flavonone isomerase OS=Oryza sativa subsp. japonica GN=CHI PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.487e-62
Identity = 122/199 (61.31%), Postives = 149/199 (74.87%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGV--AVIENNLLSEAVLESMIGKNGVSP 669
            +V+E++V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYLEE A VP L+ KW GK+A+EL     FF+DVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF   FK   FPPG+SILFT S  G LT++FSKD S+P+  V  A IEN  L EAVL+S+IG++GVSP
Sbjct:    3 AVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_ORYSI (Chalcone--flavonone isomerase OS=Oryza sativa subsp. indica GN=CHI PE=2 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.487e-62
Identity = 122/199 (61.31%), Postives = 149/199 (74.87%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGV--AVIENNLLSEAVLESMIGKNGVSP 669
            +V+E++V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYLEE A VP L+ KW GK+A+EL     FF+DVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF   FK   FPPG+SILFT S  G LT++FSKD S+P+  V  A IEN  L EAVL+S+IG++GVSP
Sbjct:    3 AVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.326e-62
Identity = 119/197 (60.41%), Postives = 151/197 (76.65%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQ--SSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S+ +L +  VTF P+  PPGS+ S FL GAGERGLEI+ +FV FTAIGVYLE+ AV  L  KWKGKTA++L  + +FF+D+ TGPFEKF ++TM+ PL+G QYSEKV ENC+A WK  G YT+AEA A+EKF    K+E FPPG+SILFT   S  SLTI+F ++GS+P+ G  VIE+  LSEA+LES+IGK+GVSP
Sbjct:    7 SLPKLVIGEVTFPPAAAPPGSSSSLFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESIIGKHGVSP 203          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.259e-61
Identity = 119/197 (60.41%), Postives = 147/197 (74.62%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENA-VPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +V+EL+V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYL+ +A V  L+ KW GK A +L     FF+DVVTG FEKF +VTMILPLTGAQYS+KV ENC+A WK  G+YTDAEA A++KF   F    F PG+SILFT S +G LT++FSKD S+P+ G   IEN  L EAVLES+IG++GVSP
Sbjct:    2 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESIIGEHGVSP 198          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1A_SOYBN (Chalcone--flavonone isomerase 1A OS=Glycine max GN=CHI1A PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 9.334e-57
Identity = 109/196 (55.61%), Postives = 146/196 (74.49%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +++ +QVE + F   +  P S K++FLGGAGERGL IEGKF+KFT IGVYLE+ AVP L+ KWKGKT+EEL  ++ F++D+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG+S+ + QS  G L +SFS+D +IP+   AVIEN  +S AVLE+MIG++ VSP
Sbjct:    3 TISAVQVEFLEFPAVVTSPASGKTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGASVFYRQSPDGILGLSFSEDATIPEKEAAVIENKAVSAAVLETMIGEHAVSP 198          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2_ARATH (Chalcone--flavonone isomerase 2 OS=Arabidopsis thaliana GN=CHI2 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.219e-56
Identity = 121/199 (60.80%), Postives = 141/199 (70.85%), Query Frame = 1
Query:   76 PSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFT-QSSGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            P PSVT L V+  TF P+++ P S K  FLGGAG        KFV  T IGVYLE  A+P +S KWKGK A+ELTESV FF+ +VTG FEK  +VTM   LTG QYSEKV ENC  I K  G YT +EAKAI++F  VFK++ FPPGSSI+F     GSLTI+FSK+  +PK G AVI+N LL EAVLESMIGKNGVSP
Sbjct:    2 PLPSVTPLHVDAFTFPPAVESPASHKRLFLGGAG--------KFVIVTVIGVYLEAMALPSISAKWKGKNAKELTESVPFFRQLVTGEFEKLARVTMKKRLTGIQYSEKVVENCEEIMKASGKYTRSEAKAIDQFLMVFKNQDFPPGSSIIFAICPKGSLTIAFSKEERVPKTGKAVIKNKLLGEAVLESMIGKNGVSP 192          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1_LOTJA (Chalcone--flavonone isomerase 1 OS=Lotus japonicus GN=CHI1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.079e-56
Identity = 108/196 (55.10%), Postives = 146/196 (74.49%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQSS-GSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S+T +QVEN+ F  S+  P + KS+FLGGAGERGL IEGKF+KFT IGVYLE+ AV  L+ KWKGK+++EL +S++FF+D+++ P EK ++ + + PL+G +YS KV ENC+A  K  G Y +AEA AIEKF   F+   FPPGSS+ + QS+ G L +SFS D +IP++   VIEN  LSEAVLE+MIG++ VSP
Sbjct:    8 SLTPIQVENLQFPASVTSPATAKSYFLGGAGERGLTIEGKFIKFTGIGVYLEDTAVDSLATKWKGKSSQELQDSLDFFRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSAGTYGEAEATAIEKFAEAFRKVDFPPGSSVFYRQSTDGKLGLSFSLDDTIPEEEAVVIENKALSEAVLETMIGEHAVSP 203          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_PHAVU (Chalcone--flavonone isomerase OS=Phaseolus vulgaris GN=CHI PE=2 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 1.032e-55
Identity = 107/201 (53.23%), Postives = 147/201 (73.13%), Query Frame = 1
Query:   70 MNPSPSVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            M  +P++T++QVE + F   +  P + K++FLGGAGERGL IEGKF+KFTAIGVYLE+ AV  L+ KWKGK +EEL  +++F++D+++GPFEK ++ + IL L+G +YS KV ENC+A  K  G Y DAEAK IE+F   FK   FPPG+S+ + QS  G L +SFS+D +IP +   VIEN  +S AVLE+MIG++ VSP
Sbjct:    1 MATAPTITDVQVEFLHFPAVVTSPATAKTYFLGGAGERGLTIEGKFIKFTAIGVYLEDKAVASLATKWKGKPSEELINTLDFYRDIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGTYGDAEAKGIEEFAEAFKKVNFPPGASVFYRQSPDGILGLSFSEDATIPGEEAVVIENKAVSAAVLETMIGEHAVSP 201          
The following BLAST results are available for this feature:
BLAST of CF834077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_TOBAC4.772e-6968.39Chalcone--flavonone isomerase OS=Nicotiana tabacum... [more]
CFI_MAIZE3.539e-6465.78Chalcone--flavonone isomerase OS=Zea mays GN=CHI P... [more]
CFI_ORYSJ1.487e-6261.31Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_ORYSI1.487e-6261.31Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_CANGE4.326e-6260.41Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_HORVU1.259e-6160.41Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]
CFI1A_SOYBN9.334e-5755.61Chalcone--flavonone isomerase 1A OS=Glycine max GN... [more]
CFI2_ARATH1.219e-5660.80Chalcone--flavonone isomerase 2 OS=Arabidopsis tha... [more]
CFI1_LOTJA2.079e-5655.10Chalcone--flavonone isomerase 1 OS=Lotus japonicus... [more]
CFI_PHAVU1.032e-5553.23Chalcone--flavonone isomerase OS=Phaseolus vulgari... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834077 ID=CF834077; Name=CF834077; organism=Citrus sinensis; type=EST; length=670bp
CAAAATCTCTTCCTCTTAAAAATTAAGTCTTAAACACACACGTGAAATTA
ATCAAAAATGCTGTCACCGATGAATCCCTCACCGTCCGTCACCGAACTGC
AGGTCGAGAACGTCACTTTCACGCCGTCCCTGCAACCTCCAGGATCAACA
AAGTCGCATTTCCTCGGCGGCGCAGGGGAGAGAGGATTGGAGATTGAAGG
GAAGTTCGTGAAGTTCACGGCGATAGGAGTGTACTTGGAGGAGAACGCCG
TGCCGTTACTCTCCGGCAAATGGAAGGGGAAGACTGCGGAGGAGTTGACG
GAATCCGTTGAGTTCTTCAAAGACGTCGTCACAGGTCCCTTTGAGAAATT
CATGAAGGTGACAATGATCTTGCCATTAACTGGTGCACAATACTCAGAGA
AGGTTGCCGAAAATTGCATGGCCATATGGAAGTTTTTTGGAATTTACACA
GATGCTGAAGCCAAAGCTATTGAAAAATTCACTGCGGTCTTCAAGGATGA
AATTTTCCCACCAGGATCCTCAATTCTCTTTACTCAATCATCAGGATCAT
TGACTATCAGCTTCTCCAAAGACGGTTCAATACCGAAAGATGGTGTTGCG
GTAATAGAGAATAATCTGCTTTCTGAGGCAGTACTGGAGTCGATGATCGG
CAAGAATGGTGTTTCTCCTG
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