CF834077

Overview
NameCF834077
Unique NameCF834077
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_PUELO (Chalcone--flavonone isomerase OS=Pueraria lobata GN=CHI PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.490e-54
Identity = 105/196 (53.57%), Postives = 146/196 (74.49%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +++ +QVE + F   +  P S +++FLGGAGERGL IEGKF+KFT IGVYLE+ AV  L+ KWKGK +EEL E+++F++D+++GPFEK ++ + ILPL+G +YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG+++ + QS  G L +SFS+D +IP +  AVIEN  +S AVLE+MIG++ VSP
Sbjct:    9 TISAVQVEFLEFPAVVTSPASGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAAKWKGKPSEELVETLDFYRDIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFQPGATVFYRQSPDGVLGLSFSEDVTIPDNEAAVIENKAVSAAVLETMIGEHAVSP 204          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CF1B1_SOYBN (Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 7.396e-54
Identity = 106/196 (54.08%), Postives = 145/196 (73.98%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S+T + VE + F   + PPGSTKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  L+ KWKGK+A EL +S++F++D++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPPGS++ + QS +G+L +SFSKD +IP+   AVI+N  LSEAVLE+MIG+  VSP
Sbjct:    6 SITNVTVEFLQFPALVTPPGSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI3_LOTJA (Chalcone--flavonone isomerase 3 OS=Lotus japonicus GN=CHI3 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.659e-54
Identity = 102/195 (52.31%), Postives = 142/195 (72.82%), Query Frame = 1
Query:   88 VTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +T +QVEN+ F  S+  P + KS+FLGGAGERGL IEGKF+KFT +GVYLE+  V  L+ KWKGK+++EL +S++F++D+++ P EK ++ + + PL+G +YS KV ENC+A  K  G Y +AEA AI KF   F++  FPPGSS+ + QS  G L +SFS D ++P+    VIEN  LSEAVLE+MIG++ VSP
Sbjct:    8 LTPIQVENLQFPASITSPATAKSYFLGGAGERGLTIEGKFIKFTGLGVYLEDKTVDSLATKWKGKSSQELLDSLDFYRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSTGTYGEAEAAAIGKFAEAFRNLDFPPGSSVFYRQSPDGELGLSFSPDDTLPEKEAVVIENKALSEAVLETMIGEHAVSP 202          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1_MEDSA (Chalcone--flavonone isomerase 1 OS=Medicago sativa GN=CHI1 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.659e-54
Identity = 105/196 (53.57%), Postives = 144/196 (73.47%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S+T + VEN+ +   +  P + KS+FLGGAGERGL IEG F+KFTAIGVYLE+ AV  L+ KWKGK++EEL E+++F++D+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF   FK   FPPG+S+ + QS  G L +SFS D SIP+   A+IEN  +S AVLE+MIG++ VSP
Sbjct:    4 SITAITVENLEYPAVVTSPVTGKSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSP 199          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CF1B2_SOYBN (Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.670e-53
Identity = 105/196 (53.57%), Postives = 144/196 (73.47%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S+T + VE + F   + PP STKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  L  KWKGK+A EL +S++F++D++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y++AE KAIE+F   FKD+ FPPGS++ + QS +G+L +SFSKD +IP+   AVI+N  LSEAVLE+MIG+  VSP
Sbjct:    6 SITNVTVEFLQFPALVTPPASTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLGAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMESVGTYSEAEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSP 201          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2B_SOYBN (Chalcone--flavonone isomerase 2-B OS=Glycine max GN=CHI2-B PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.922e-52
Identity = 105/197 (53.30%), Postives = 144/197 (73.10%), Query Frame = 1
Query:   85 SVTELQVENVTFTPSLQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSL-TISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            S+T + VE + F   + PPGSTKS+FLGGAG RGL I+ +FVKFT IGVYLE+ AV  L+ KWKGK+A EL +S++F++D++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPPGS++ + QS +G+L  + FSKD +IP+   AVI+N  LSEAVLE+MIG+  VSP
Sbjct:    6 SITNVTVEFLQFPALVTPPGSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGQLIFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSP 202          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI2_MEDSA (Chalcone--flavonone isomerase 2 (Fragment) OS=Medicago sativa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.705e-50
Identity = 99/174 (56.90%), Postives = 132/174 (75.86%), Query Frame = 1
Query:  151 KSHFLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            KS+FLGGAGERGL IEG F+KFTAIGVYLE+ AV  L+ KWKGK++EEL E+++F++D+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF   FK   FPPG+S+ + QS  G L +SFS D SIP+   A+IEN  +S AVLE+MIG++ VSP
Sbjct:    1 KSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSP 174          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI1_SOYBN (Chalcone--flavonone isomerase 1 (Fragment) OS=Glycine max GN=CHI1 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.889e-41
Identity = 85/153 (55.56%), Postives = 112/153 (73.20%), Query Frame = 1
Query:  214 FTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS-SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            +T IGVYLE+ AVP L+ KWKGKT+EEL  ++ F++D+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF   FK+  F PG   L+ QS  G L +SFS+D +IP+   AVIEN  +S AVLE+MIG++ VSP
Sbjct:    1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGPLFLYRQSPDGILGLSFSEDVTIPEKEAAVIENKAVSAAVLETMIGEHAVSP 153          
BLAST of CF834077 vs. ExPASy Swiss-Prot
Match: CFI_PEA (Chalcone--flavonone isomerase OS=Pisum sativum GN=CHI PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.073e-36
Identity = 88/187 (47.06%), Postives = 123/187 (65.78%), Query Frame = 1
Query:  124 PSLQPPGSTKSH-FLGGAGERGLEIEGKFVKFTAIGVYLEENAVPLLSGKWKGKTAEELTESVEFFKDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCMAIWKFFGIYTDAEAKAIEKFTAVFKDEIFPPGSSILFTQS----SGSLTISFSKDGSIPKDGVAVIENNLLSEAVLESMIGKNGVSP 669
            P++     T++H FLGGAGERGL I G F+KFT IGVYLE+ A   L+ KW+GK  EEL E+++F++D+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAE +AI+    + +  IF     +L  ++     G L +S SKD SIP+   A+IEN   S AVLE+MIG++ VSP
Sbjct:   18 PAVVTSPVTENHIFLGGAGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKL-EELLETLDFYRDIISGPFEKLIRRSKIKELSGPEYSRKVMENCVAHLKSVGTYGDAEVEAIQNLQKLSRMLIF---HLVLLKKNRQSPDGILGLSSSKDISIPEKEDAIIENKAASSAVLETMIGEHAVSP 200          
The following BLAST results are available for this feature:
BLAST of CF834077 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_PUELO1.490e-5453.57Chalcone--flavonone isomerase OS=Pueraria lobata G... [more]
CF1B1_SOYBN7.396e-5454.08Chalcone--flavonone isomerase 1B-1 OS=Glycine max ... [more]
CFI3_LOTJA9.659e-5452.31Chalcone--flavonone isomerase 3 OS=Lotus japonicus... [more]
CFI1_MEDSA9.659e-5453.57Chalcone--flavonone isomerase 1 OS=Medicago sativa... [more]
CF1B2_SOYBN3.670e-5353.57Chalcone--flavonone isomerase 1B-2 OS=Glycine max ... [more]
CFI2B_SOYBN6.922e-5253.30Chalcone--flavonone isomerase 2-B OS=Glycine max G... [more]
CFI2_MEDSA1.705e-5056.90Chalcone--flavonone isomerase 2 (Fragment) OS=Medi... [more]
CFI1_SOYBN1.889e-4155.56Chalcone--flavonone isomerase 1 (Fragment) OS=Glyc... [more]
CFI_PEA1.073e-3647.06Chalcone--flavonone isomerase OS=Pisum sativum GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834077 ID=CF834077; Name=CF834077; organism=Citrus sinensis; type=EST; length=670bp
CAAAATCTCTTCCTCTTAAAAATTAAGTCTTAAACACACACGTGAAATTA
ATCAAAAATGCTGTCACCGATGAATCCCTCACCGTCCGTCACCGAACTGC
AGGTCGAGAACGTCACTTTCACGCCGTCCCTGCAACCTCCAGGATCAACA
AAGTCGCATTTCCTCGGCGGCGCAGGGGAGAGAGGATTGGAGATTGAAGG
GAAGTTCGTGAAGTTCACGGCGATAGGAGTGTACTTGGAGGAGAACGCCG
TGCCGTTACTCTCCGGCAAATGGAAGGGGAAGACTGCGGAGGAGTTGACG
GAATCCGTTGAGTTCTTCAAAGACGTCGTCACAGGTCCCTTTGAGAAATT
CATGAAGGTGACAATGATCTTGCCATTAACTGGTGCACAATACTCAGAGA
AGGTTGCCGAAAATTGCATGGCCATATGGAAGTTTTTTGGAATTTACACA
GATGCTGAAGCCAAAGCTATTGAAAAATTCACTGCGGTCTTCAAGGATGA
AATTTTCCCACCAGGATCCTCAATTCTCTTTACTCAATCATCAGGATCAT
TGACTATCAGCTTCTCCAAAGACGGTTCAATACCGAAAGATGGTGTTGCG
GTAATAGAGAATAATCTGCTTTCTGAGGCAGTACTGGAGTCGATGATCGG
CAAGAATGGTGTTTCTCCTG
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