CF834078

Overview
NameCF834078
Unique NameCF834078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length631
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_RABIT (Eukaryotic translation initiation factor 3 subunit I OS=Oryctolagus cuniculus GN=EIF3I PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.764e-36
Identity = 73/136 (53.68%), Postives = 95/136 (69.85%), Query Frame = -2
Query:  184 HKKIITLLAKAADGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFNIK 591
            H + I  +  + + + F+T S D   KL+D+ TLE  KT+ TE P     +SP  +HVV+GGGQ+A  VTTT  R GK E +FF   F+EE G VKGHFGPIN++AF+PDGKS+SSGGEDGYVR+H+FDP YF  +
Sbjct:  187 HSRQINDIQLSREMTMFVTASKDNTAKLFDSTTLEHQKTFRTEPPRELAALSPNYEHVVVGGGQEAMDVTTTSTRIGKFEARFFHLAFEEEFGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRIHYFDPQYFEFE 322          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_AEDAE (Eukaryotic translation initiation factor 3 subunit I OS=Aedes aegypti GN=AAEL013144 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.386e-35
Identity = 69/142 (48.59%), Postives = 101/142 (71.13%), Query Frame = -2
Query:  190 KDSDKETGHKKIITLLAKAADGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFN 615
            K+ +    H   I  +  ++DG+  ++ S D   KL+D+ +L  +KTY TERPVN+  +SP+ +HVVLGGGQ+A  VTTT  +AGK + +FF  +++EE   VKGHFGPIN+LAF+PDGKS+++GGEDG+VR+  FD  Y++
Sbjct:  181 KELNSVNDHTLNINDMQLSSDGTMLVSASKDATAKLFDSESLMCLKTYKTERPVNSAAISPIHEHVVLGGGQEAMEVTTTSTKAGKFDSRFFHLVYEEEFARVKGHFGPINSLAFHPDGKSYATGGEDGFVRVQVFDASYYD 322          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_CULQU (Eukaryotic translation initiation factor 3 subunit I OS=Culex quinquefasciatus GN=CPIJ018275 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 68/141 (48.23%), Postives = 100/141 (70.92%), Query Frame = -2
Query:  193 KDSDKETGHKKIITLLAKAADGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYF 615
            K+ +    H  +I  +  +ADG+  ++ S D   KL+D+ +L  +KTY TERPVN+  +SP+ +HVVLGGGQ+A  VTTT  ++GK + + F  +++EE   VKGHFGPIN+LAF+PDGKS+++GGEDG+VR+  FD  Y+
Sbjct:  183 KELNSVNDHTGVINDMQLSADGTMLVSASKDTTAKLFDSESLMCLKTYKTERPVNSAAISPIHEHVVLGGGQEAMEVTTTSTKSGKFDSRLFHLVYEEEFARVKGHFGPINSLAFHPDGKSYATGGEDGFVRVQVFDASYY 323          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPTN (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif34 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.879e-35
Identity = 64/124 (51.61%), Postives = 93/124 (75.00%), Query Frame = -2
Query:  190 AADGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFN 561
            +AD ++F+T S DK  KL  +R L ++KTYV + P+N+  ++P  D+V+LGGGQ A  VTTT  R GK E +F+ K+F++EIG V+GHFGP+N +  +P+G +++SGGEDGYVR+HHFD  YF+
Sbjct:  201 SADRTYFITASKDKSAKLISSRNLAILKTYVADTPLNSATITPKKDYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVRGHFGPLNTVGVHPNGTAYASGGEDGYVRVHHFDKPYFD 324          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPOR (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus oryzae GN=tif34 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 8.984e-35
Identity = 65/131 (49.62%), Postives = 98/131 (74.81%), Query Frame = -2
Query:  190 IITLLAKAADGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFN 582
            +I+ +  +AD ++F+T S DK  KL  +R L ++KTYV + P+N+  ++P  ++V+LGGGQ A  VTTT  R GK E +F+ K+F++EIG V+GHFGP+N +A +P+G +++SGGEDGYVR+HHFD  YF+
Sbjct:  193 LISDIQFSADRTYFITASKDKSAKLISSRNLAILKTYVADTPLNSAAITPKKEYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVRGHFGPLNTVAVHPNGTAYASGGEDGYVRVHHFDKPYFD 323          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_EMENI (Eukaryotic translation initiation factor 3 subunit I OS=Emericella nidulans GN=tif34 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.173e-34
Identity = 65/122 (53.28%), Postives = 90/122 (73.77%), Query Frame = -2
Query:  190 DGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFN 555
            D +HFLT S DK  KL  +R L ++KTYV + P+N+  ++P  ++V+LGGGQ A  VTTT  R GK E +F+ K+F++EIG VKGHFGP+N +  +P G +++SGGEDGYVR+HHFD  YF+
Sbjct:  203 DRTHFLTASKDKSAKLMSSRNLAILKTYVADTPLNSAAITPKKEYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVKGHFGPLNTIHVHPAGTAYASGGEDGYVRVHHFDKPYFD 324          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPNC (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif34 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.532e-34
Identity = 64/124 (51.61%), Postives = 91/124 (73.39%), Query Frame = -2
Query:  190 AADGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFN 561
            +AD ++F+T S DK  KL   R L ++KTYV + P+N+  ++P  D+V+LGGGQ A  VTTT  R GK E +F+ K+F++EIG V+GHFGP+N +  +P G +++SGGEDGYVR+HHFD  YF+
Sbjct:  202 SADRTYFITASKDKSAKLMSTRNLAILKTYVADTPLNSATITPKKDYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVRGHFGPLNTVHIHPAGTAYASGGEDGYVRVHHFDKPYFD 325          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_NEUCR (Eukaryotic translation initiation factor 3 subunit I OS=Neurospora crassa GN=tif-34 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.414e-34
Identity = 69/130 (53.08%), Postives = 93/130 (71.54%), Query Frame = -2
Query:  190 ITLLAKAADGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFN 579
            IT L  + D ++F+T S DK  KL  A+ LE++KTY  + P+N+  ++   D V+LGGGQ A  VTTT  R GK E +F+ KIF+ EIG V+GHFGP+N +A +P GKS++SGGEDGYVR+HHFD  YF+
Sbjct:  194 ITDLQWSHDRTYFITASKDKTSKLITAKDLEVLKTYPADTPLNSATITRKKDFVILGGGQAAMDVTTTSARQGKFEARFYHKIFESEIGRVRGHFGPLNTVAADPTGKSYASGGEDGYVRIHHFDKGYFD 323          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_NEOFI (Eukaryotic translation initiation factor 3 subunit I OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif34 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.459e-34
Identity = 63/122 (51.64%), Postives = 91/122 (74.59%), Query Frame = -2
Query:  190 DGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFN 555
            D ++F+T S DK  KL  +R L ++KTYV + P+N+  ++P  D+V+LGGGQ A  VTTT  R GK E +F+ K+F++EIG V+GHFGP+N +  +P+G +++SGGEDGYVR+HHFD  YF+
Sbjct:  207 DRTYFITASKDKSAKLISSRNLAILKTYVADTPLNSATITPKKDYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVRGHFGPLNTVDVHPNGTAYASGGEDGYVRVHHFDKPYFD 328          
BLAST of CF834078 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPFU (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus fumigatus GN=tif34 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 4.459e-34
Identity = 63/122 (51.64%), Postives = 91/122 (74.59%), Query Frame = -2
Query:  190 DGSHFLTGSLDKYGKLWDARTLELIKTYVTERPVNAVNMSPLLDHVVLGGGQDASAVTTTDHRAGKLEDKFFDKIFQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHFDPDYFN 555
            D ++F+T S DK  KL  +R L ++KTYV + P+N+  ++P  D+V+LGGGQ A  VTTT  R GK E +F+ K+F++EIG V+GHFGP+N +  +P+G +++SGGEDGYVR+HHFD  YF+
Sbjct:  207 DRTYFITASKDKSAKLISSRNLAILKTYVADTPLNSATITPKKDYVILGGGQAAMDVTTTSARQGKFEARFYHKVFEDEIGRVRGHFGPLNTVDVHPNGTAYASGGEDGYVRVHHFDKPYFD 328          
The following BLAST results are available for this feature:
BLAST of CF834078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
EIF3I_RABIT4.764e-3653.68Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_AEDAE1.386e-3548.59Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CULQU1.810e-3548.23Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPTN6.879e-3551.61Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPOR8.984e-3549.62Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_EMENI1.173e-3453.28Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPNC1.532e-3451.61Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_NEUCR3.414e-3453.08Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_NEOFI4.459e-3451.64Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPFU4.459e-3451.64Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834078 ID=CF834078; Name=CF834078; organism=Citrus sinensis; type=EST; length=631bp
TTTTTTTTTTTTTTTTTGACACGAAAATGAAACCCTTGATATTGCACCTA
CAATGCGAATTCCTAAAACATACAAANACTGAAGTCGAGAAGAGGCTTTA
TTTATATGGATAAAAATTGACGTCCACAAATCCGCCAAAATTTAAAAAAA
AAAAAAATTTCTGCAAATCCGCCAAAATTATATCTTGATGTTGAAGTAAT
CCGGGTCAAAATGGTGTAACCTCACATAACCATCTTCACCTCCACTTGAG
AAACTTTTACCATCAGGGTTGAAAGCCAAGGCATTTATAGGTCCAAAGTG
TCCTTTAACACCTCCAATTTCTTCTTGGAAAATCTTGTCAAAGAATTTAT
CTTCCAACTTCCCTGCACGATGATCAGTTGTCGTGACAGCTGAAGCATCT
TGACCACCTCCAAGGACCACATGATCAAGAAGTGGAGACATATTAACAGC
ATTGACTGGGCGCTCCGTCACATAGGTCTTGATAAGCTCCAGTGTTCTGG
CATCCCAAAGCTTACCATATTTATCAAGGGAACCAGTGAGGAAATGTGAT
CCATCAGCAGCTTTTGCAAGCAATGTTATAATCTTTTTATGACCAGTTTC
CTTGTCCGAATCTTTAAGCAGTTTCCCTGTC
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