CF834079

Overview
NameCF834079
Unique NameCF834079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DROGR (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila grimshawi GN=Trip1 PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.599e-45
Identity = 93/232 (40.09%), Postives = 134/232 (57.76%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRP++++GHER +T +KYN++GDLLFS +KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D T KLW+VE G  + +    S  R+ +F+     A  +TD  M  N  + +  +   D      E  L +   + +I    WGPL+ TII+  ++  + IWD   G+  +  D    H   I  +  + DG+ F+T S D +AKL+DA +L  + TY T
Sbjct:    1 MRPLMLQGHERSITQIKYNREGDLLFSSSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTTKLWDVEYGTVIASIATKSSVRTSNFSFSGNQAAYSTDKAMGQNCELFIIDVRNADSTLSEQEPTLRIPMVESKITSMQWGPLDETIITGHDNGNIAIWDVRKGQ--KVVDSGVDHAAGINDMQLSKDGTMFVTASKDNTAKLFDAESLMCLKTYKT 230          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DICDI (Eukaryotic translation initiation factor 3 subunit I OS=Dictyostelium discoideum GN=eif3i PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.766e-43
Identity = 96/231 (41.56%), Postives = 144/231 (62.34%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPI ++ HERP+T + +N++GDLLF  AKD   ++W+  NGER+G+Y+   G V+  DVS+DS  LIT SAD  A++W+V +G QL + +F+  ARS++F+ GDK  ++ TD  M   + IHV     D   +  +S   L  PQ +I +A WGPLN+TI ++ ED  VRI+ TE  +L++       H K +T +        F+T S D +AKL+D +TL+L+ T+ T
Sbjct:    1 MRPISLRLHERPITQVLFNREGDLLFVAAKDKLVSLWYTTNGERIGSYQC-GGVVYSIDVSQDSKYLITASADAKARVWDVSSGRQLDSTDFEVSARSIEFSQGDKQILVVTDQVMGCQAKIHVFDFDKDEVRKLNKS-YTLPSPQCKITQATWGPLNKTIFASCEDGAVRIYCTEKRELIKTI---LDHNKLVTRIEWTKHRIMFMTCSKDGTAKLYDTKTLKLLRTFDT 226          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DROMO (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila mojavensis GN=Trip1 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.718e-43
Identity = 87/228 (38.16%), Postives = 136/228 (59.65%), Query Frame = 1
Query:  121 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGES-VLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            +++GHER +T +KYN++GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  ++  LITG+ D T K+W+VE G  + +    S  R+ +F+     A  +TD  M  N  + +  +    +  S ++  L +   + +I   +WGPL+ TII+  ++  + IWD   G+ + +S  +  H   I  +  + DG+ F+T S D +AKL+D+ +L  + TY T
Sbjct:    1 MLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWETRKLITGAGDMTTKIWDVEYGTVIASIAAKSSVRTCNFSFSGNQAAYSTDKAMGQNCELFIIDVRNADSSLSEQAPTLRIPMVESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVDSGSD--HTAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKT 226          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DROYA (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila yakuba GN=Trip1 PE=3 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 6.162e-43
Identity = 88/228 (38.60%), Postives = 134/228 (58.77%), Query Frame = 1
Query:  121 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            +++GHER +T +KYN++GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D T K+W+VE G  + +    S  R+ +F+     A  +TD  M  +  + +  +   D +    E  L +   + +I   +WGPL+ TII+  ++  + IWD   G+  +  D  T H   I  +  + DG+ F+T S D +AKL+D+ +L  + +Y T
Sbjct:    1 MLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTTKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFLIDVRNADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQ--KVVDSGTDHSAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKSYKT 226          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DROVI (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila virilis GN=Trip1 PE=3 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 8.048e-43
Identity = 89/228 (39.04%), Postives = 133/228 (58.33%), Query Frame = 1
Query:  121 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            +++GHER +T +KYN++GDLLFS +KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D T K+W+VE G  + +    S  R+ +F+     A  +TD  M  N  + +  +   D +    E  L +   + +I   +WGPL+ TII+  ++  + IWD   G+  +  D  T H   I  +  + DG+ F+T S D +AKL+D+ +L  + TY T
Sbjct:    1 MLQGHERSITQIKYNREGDLLFSSSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTTKIWDVEYGTVIASIPTKSSVRTSNFSFSGNQAAYSTDKAMGQNCELFIIDVRNADSSLSEQEPTLRIPMVESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQ--KVVDSGTDHTAGINDMQLSKDGTMFVTASRDTTAKLFDSESLMCLKTYKT 226          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_BOMMO (Eukaryotic translation initiation factor 3 subunit I OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.048e-43
Identity = 92/232 (39.66%), Postives = 136/232 (58.62%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGES-VLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+P++++GH+R +T +KYN++GDLLFS AKD  P VW++ NGERLGT+ GH G +WC DV   S+ LITG  D + +LW++ETG  + T   +S  R+ +F+     A  TTD  M     + V          SG++ +L  +    ++   +WG L+ TII+  E   +  WD  TGK +  S KE  H   IT +  + DG+ F+T S D +AKL+D  +LEL+  Y T
Sbjct:    1 MKPLMLQGHQRAITQIKYNREGDLLFSAAKDSKPNVWWSLNGERLGTFNGHGGVIWCLDVDWQSINLITGGGDSSCRLWDLETGKNIATLKSNSSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRTIDETVSGQAPILKWEITDSKVTSMIWGSLDETIITGHEAGDLIQWDLRTGKKI-HSVKE--HTHQITDMQLSRDGTMFVTASKDHTAKLFDTNSLELLKEYKT 229          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DROWI (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila willistoni GN=Trip1 PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.373e-42
Identity = 89/228 (39.04%), Postives = 133/228 (58.33%), Query Frame = 1
Query:  121 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGES-VLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            +++GHER +T +KYN++GDLLFS +KD  P VW++ NGERLGTY GH GAVWC DV  +S  LIT   D TAKLW+VE G  + +    S  R+ +F+     A  +TD  M  +  + +  +    +  S ++  L +   + +I   +WGPL+ TII+  ++  + IWD   G+  +  D  T H   I  +  + DG+ F+T S D +AKL+D+ TL  + TY T
Sbjct:    1 MLQGHERSITQIKYNREGDLLFSSSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITAGGDMTAKLWDVEYGTVIASIPTKSSVRTCNFSFSGNQAAYSTDKTMGQSCELFIIDVRNADSTLSEQTPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDVRKGQ--KVVDSGTDHTGVINDMQLSKDGTMFVTASKDATAKLFDSETLMCLKTYKT 226          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DROAN (Eukaryotic translation initiation factor 3 subunit I OS=Drosophila ananassae GN=Trip1 PE=3 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 1.373e-42
Identity = 91/230 (39.57%), Postives = 137/230 (59.57%), Query Frame = 1
Query:  121 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQS-GESVLILKGP--QGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            +++GHER +T +KYN++GDLLFSC+KD  P VW++ NGERLGTY GH GAVWC DV  +S  LITG+ D T K+W+VE G  + +    S  R+ +F+     A  +TD  M  +  + +  +    AD S  E    L+ P  + +I   +WGPL+ TII+  ++  + IWD   G+ + +S  +  H   I  +  + DG+ F+T S D +AKL+D+ +L  + TY T
Sbjct:    1 MLQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESRKLITGAGDMTTKIWDVEYGTIIASIPSKSSVRTSNFSFSGNQAAYSTDKAMGQSCELFIIDVRN--ADSSLAEQTPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAIWDIRKGQKVVDSGSD--HTAGINDMQLSKDGTMFVTASKDTTAKLFDSESLMCLKTYKT 226          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DANRE (Eukaryotic translation initiation factor 3 subunit I OS=Danio rerio GN=eif3i PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.994e-42
Identity = 84/231 (36.36%), Postives = 136/231 (58.87%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+PIL++GHER +T +KYN++GDLLFS AKD    VW++ NGERLGTY GH GAVWC DV  D+  ++TGSAD + +LW+ ETG QL      S  R+  F     + + +TD  M     ++   +      +  +  + +   + +I  AVWGPL   +I+  E+  +  +  ++G++L+++ +   H K I  +  + D +  ++ S D +AK++D+ TLE + T+ T
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFSVAKDPIANVWYSVNGERLGTYNGHTGAVWCVDVDWDTKNVLTGSADNSCRLWDCETGKQLALLETSSAVRTCGFDFSGNIIMFSTDKQMGYQCFLNYYDLRDPQQIEDNQPYISVPCSESKITSAVWGPLGEFVIAGHENGEINQFSAKSGEVLKKAKE---HTKQINDIQSSVDLTMIISASKDCTAKMFDSSTLEHVKTFKT 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_XENTR (Eukaryotic translation initiation factor 3 subunit I OS=Xenopus tropicalis GN=eif3i PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.813e-42
Identity = 90/231 (38.96%), Postives = 136/231 (58.87%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPIL++GHER +T +KYN+DGDLLF+ AKD    VW++ NGERLGTY GH GAVWC DV  D+  +++GSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +      +  E  + +   + +I  AVWGPL   II+  E+  +  +  ++G+++  S KE  H K I  +  + D + F+T S D ++KL+D+ +LE   T+ T
Sbjct:    1 MRPILLQGHERSITQIKYNRDGDLLFTVAKDPVVNVWYSVNGERLGTYSGHTGAVWCVDVDWDTRHVLSGSADNSCRLWDCETGKQLALLETNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFIDLRDPTQIEDNEPYMKIPCSESKITSAVWGPLGENIIAGHENGELNQYSAKSGEIV-NSIKE--HSKQINDIQTSRDMTMFVTASKDCTSKLFDSTSLEHQKTFRT 228          
The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
EIF3I_DROGR8.599e-4540.09Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DICDI2.766e-4341.56Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROMO4.718e-4338.16Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROYA6.162e-4338.60Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROVI8.048e-4339.04Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_BOMMO8.048e-4339.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROWI1.373e-4239.04Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DROAN1.373e-4239.57Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DANRE3.994e-4236.36Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_XENTR6.813e-4238.96Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bp
CTCCCACTAGCTCTATCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCG
GAAACTCCATTCGTCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAA
AAGCAAGCATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACA
TATCTTAAATACAACAAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGA
TCACACACCCACCGTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCT
ACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCG
ATGACGCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGT
TGAAACAGGGGCTCAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGT
CTGTCGACTTTGCTGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCT
TTCATGGAATTAAACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCC
TGCTGATCAGAGTGGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAA
GAATAGACAGAGCAGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCT
GGAGAAGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCT
TAGAGAGTCGGACAAGGAAACTGGTCATAAAAAGACTATAACATCGCTTG
CAAAAGCTGCTGATGGATCACATTTCCTCACTGGTTCCCTTGATAAATCT
GCTAAGCTGTGGGATGCCAGAACACTGGAGCTTATCACGACCTATGTGAC
GG
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