CF834079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14 Identity = 56/221 (25.34%), Postives = 102/221 (46.15%), Query Frame = 1 Query: 130 GHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVI-TTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELI 786 GH ++ + ++ D L S + D T VW +G+ L T +GH+ V+CCD + S +++GS D++ K+W V+TG L T + S P +V+F L V + D + A + + AD+ V +K + P + I++A D +++WD G+ L+ K + + ++GS D +W+ +T E++ Sbjct: 79 GHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLR-TLADEGNPPVSFVK----------FSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNLQTKEIV 288 HSP 2 Score: 72.7886 bits (177), Expect = 2.525e-12 Identity = 60/227 (26.43%), Postives = 98/227 (43.17%), Query Frame = 1 Query: 118 ILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSP-ARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795 + + GH ++ +K++ +G+ L S A D +W A +G T GH+ + S DS L++ S D+T K+W++ +G L T S DF L I + F E VK +G+ + L I + I+S D + RIWD +G+ LR E ++ + + +G + LT +LD + KLWD + TY Sbjct: 33 LTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNL--IVSGSFDESVKIWEVK---------TGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADE--GNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 246
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: UTP13_SCHPO (Probable U3 small nucleolar RNA-associated protein 13 OS=Schizosaccharomyces pombe GN=utp13 PE=2 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14 Identity = 51/188 (27.13%), Postives = 90/188 (47.87%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPA--RSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNR----TIISAGEDAIVRIWDTETGKLLRESDKE 669 +K H+R + ++ +KDG ++ S ++D T +W + GE +G RGH VW C + S L +GS D+T ++WNV+T + T + A + + + G ++ D +++ S SGE V L + R VW +R ++S G DA+V +W T + + + +E Sbjct: 461 IKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGEVVGVLRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSL------------SSGECVATLDNHEDR----VWALASRFDGSLLVSGGADAVVSVWKDVTEEYIAKQAEE 632
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: LIS1_CAEEL (Lissencephaly-1 homolog OS=Caenorhabditis elegans GN=lis-1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.524e-14 Identity = 56/225 (24.89%), Postives = 102/225 (45.33%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVET-GAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQS--------GESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDAR 771 +KGHE ++ + + GD + S ++DHT W G + T+RGHN V +S D + S DQT +W+ T A+L + + V++A D T E NS H+ + D+S G+ + L + + + P + +IS +D +R+W+ + ++ + H+ ++++A +TGS+D S K+W+ R Sbjct: 187 LKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWA-PDTAYTNVTGQQPEGNST-HI--LFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLISVADDKTLRVWELSAQRCMKAIE---AHEHFVSTVAFHQTSPFVITGSVDMSCKVWECR 404
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: MDV1_KLULA (Mitochondrial division protein 1 OS=Kluyveromyces lactis GN=MDV1 PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.010e-14 Identity = 67/244 (27.46%), Postives = 109/244 (44.67%), Query Frame = 1 Query: 121 LMKGHERPLTYLKYNKD-GDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETG-------------AQLFTFNFDSPARSVDFAVGDKLAVITTDPFM---ELNSA-----IHVKRIAGDPADQSG----ESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDART 774 L K H+ +T L ++ G + + + DH+ VW +++ T GH ++ C + + S TLITG D KLW+++ A L+TF+ + GD L + D + +LNS I + G Q SVL+ K P + + + +D IVR+WD +GK++R + GH ITSL D + +TG++D+S ++WD RT Sbjct: 392 LPKAHDEDITCLDFDMPFGTMCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS-TLITGGRDAVLKLWDIDKAMADEASNSSEDNDACLYTFDSHVDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRNSVLLTKEPPAI---GALQCFDAALATGTKDGIVRLWDLRSGKVVRMLE---GHTDAITSLQ--FDSVNLVTGAMDRSIRIWDLRT 626
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.850e-14 Identity = 62/232 (26.72%), Postives = 95/232 (40.95%), Query Frame = 1 Query: 130 GHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGH----NGAVW-----CCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF--NFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITT 792 G ERP+ ++++ +G+ S + VW +DN + +RGH +G W D + +TL TG+AD T LW L + R GD L + D L +G +L+ +G I P + S G DAI RIWD +GK + D+ H + I ++A + +G T S D + K+WD R + L T Sbjct: 170 GGERPIAIVRFSNNGNHFASGSWGGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASFDTTWRLWDV------------HTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDE---HIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHT 386
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.850e-14 Identity = 58/218 (26.61%), Postives = 99/218 (45.41%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSP---ARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRE-SDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765 + GH + + +K++ DG LL S + D T +W A G R+ T GH+ V + + L T + D + KLW+ ETGA L T + + D A G LA + D + L +SG + + + A + ++++ D ++R+WDT+TG L+ D+++ ++ A + + L +LD AKLWD Sbjct: 36 LSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDV------------RSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTLFDRDS---PPVSFAAFTPNAKYVLCNTLDGRAKLWD 238
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TUP11_SCHPO (Transcriptional repressor tup11 OS=Schizosaccharomyces pombe GN=tup11 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13 Identity = 49/216 (22.69%), Postives = 98/216 (45.37%), Query Frame = 1 Query: 154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKE---------TGHKKTITSLAKAADGSHFLTGSLDKSAKLWDART 774 + ++ DG L + +D +W + + GH ++ D S + +++GS D+TA+LW+VETG + ++ ++ A+ D F+ + S + R+ SG V L+G + + + P + ++S D +++W+ + + + S + TGH + S+A + D L+GS D+S + WD +T Sbjct: 366 IAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKLEIENGVTAI--------AISPNDQFIAVGSLDQIIRV----WSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQT 569
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EBI_DROME (F-box-like/WD repeat-containing protein ebi OS=Drosophila melanogaster GN=ebi PE=1 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 5.088e-13 Identity = 68/265 (25.66%), Postives = 105/265 (39.62%), Query Frame = 1 Query: 139 RPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA-GDPAD----QSGESVLILKGPQGRI-----------------DRAV--------------WGPL---------NRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795 + +T L +N DG LL + + D +W D G T H G ++ ++ +++ D+T +W+ TG F F S PA VD+ A +TD IHV R+ +P + E I PQG++ DR W P N + SA D+ VR+WD E G + K H + + S+A + DG H +GS DK +W +T +L+ +Y Sbjct: 411 KDVTSLDWNCDGSLLATGSYDGYARIWKTD-GRLASTLGQHKGPIFALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTD------QRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTK---HTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSY 665
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 6.645e-13 Identity = 58/224 (25.89%), Postives = 91/224 (40.62%), Query Frame = 1 Query: 121 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQ--------SGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDA 768 ++ GH P+ ++ D + L S ++D T +W L Y+GHN VW S ++G D+ A+LW + L F LA + F + +A AD+ +G V I G +G I + P R + + D V +WD G ++ E GH T+ SL + DG +GS+D + +LWDA Sbjct: 538 ILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIF-------------AGHLADVNCTRFHP-----NSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL---KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.133e-12 Identity = 56/229 (24.45%), Postives = 98/229 (42.79%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDAR--TLELITTYVT 801 + GH P+ + + +LL SC++D T +W + TYRGH VW + ++ S D+TA+LW ++ L F S V F ++ S+ R+ + +G+SV ++ G +G + + R + S D + IWD G L+ + H T+T++ + DG+ LD + LWD T + I+ ++T Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSN--------YVATGSSDRTVRLWD---NMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLR---HTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHKVTEDYISNHIT 660 The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bpback to top |