CF834079

Overview
NameCF834079
Unique NameCF834079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE4_XENLA (Transducin-like enhancer protein 4 OS=Xenopus laevis GN=tle4 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 9.596e-12
Identity = 53/205 (25.85%), Postives = 89/205 (43.41%), Query Frame = 1
Query:  154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765
            L  + D  + FSC  D    VW   N   +  ++GH     C D+S D   L TG  D T + W++  G QL   +F S   S+ +   G+ LAV   +  +E+   +HV +            VL LK          +    +  +S G+D ++  W T  G  + +S + +    ++ S   + D  + +TGS DK A +++
Sbjct:  582 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEV---LHVTKPDKYQLHLHESCVLSLK----------FAHCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSCDISVDDKYIVTGSGDKKATVYE 769          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE4_MOUSE (Transducin-like enhancer protein 4 OS=Mus musculus GN=Tle4 PE=1 SV=4)

HSP 1 Score: 70.8626 bits (172), Expect = 9.596e-12
Identity = 53/205 (25.85%), Postives = 89/205 (43.41%), Query Frame = 1
Query:  154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765
            L  + D  + FSC  D    VW   N   +  ++GH     C D+S D   L TG  D T + W++  G QL   +F S   S+ +   G+ LAV   +  +E+   +HV +            VL LK          +    +  +S G+D ++  W T  G  + +S + +    ++ S   + D  + +TGS DK A +++
Sbjct:  583 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEV---LHVTKPDKYQLHLHESCVLSLK----------FAHCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSCDISVDDKYIVTGSGDKKATVYE 770          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE4_HUMAN (Transducin-like enhancer protein 4 OS=Homo sapiens GN=TLE4 PE=1 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 9.596e-12
Identity = 53/205 (25.85%), Postives = 89/205 (43.41%), Query Frame = 1
Query:  154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765
            L  + D  + FSC  D    VW   N   +  ++GH     C D+S D   L TG  D T + W++  G QL   +F S   S+ +   G+ LAV   +  +E+   +HV +            VL LK          +    +  +S G+D ++  W T  G  + +S + +    ++ S   + D  + +TGS DK A +++
Sbjct:  583 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEV---LHVTKPDKYQLHLHESCVLSLK----------FAHCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSCDISVDDKYIVTGSGDKKATVYE 770          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: UTP15_MOUSE (U3 small nucleolar RNA-associated protein 15 homolog OS=Mus musculus GN=Utp15 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 53/212 (25.00%), Postives = 103/212 (48.58%), Query Frame = 1
Query:  160 YNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            + +DG LL + ++D    ++  +    L  + GH  AV   D + D+  +++G+ D T KLW++    ++ TF   S     D+      + +  D F+   S  H  +I      ++ ++VL ++  Q  ++  +  P    ++SAG    V++WD   G  L  S K   H KT+T L  ++ G   L+GSLD+  K++   + +++ ++
Sbjct:   88 FRQDGQLLVAGSEDGVVQLFDINGRAPLRQFEGHTKAVHTVDFTADNYHVVSGADDYTVKLWDIPNSKEILTFKEHS-----DYVRCGCASKLNPDLFV-TGSYDHTVKIFD---ARTNKNVLCVEHGQ-PVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQLLVSLK--NHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: UTP15_BOVIN (U3 small nucleolar RNA-associated protein 15 homolog OS=Bos taurus GN=UTP15 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 53/212 (25.00%), Postives = 101/212 (47.64%), Query Frame = 1
Query:  160 YNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            + +DG LL + ++D    ++       L  + GH  AV   D + D   +++G+ D T KLW++    ++ TF   S     D+      + + TD F+  +    VK        ++ +SV+ ++  Q  ++  +  P    ++SAG    V++WD   G  L  S K   H KT+T L  ++ G   L+GSLD+  K++   + +++ ++
Sbjct:   88 FRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHSVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHS-----DYVRCGCASKLNTDLFVTGSYDHTVKMFDA----RTNQSVISVEHGQ-PVESVLLFPSGGLLVSAG-GRYVKVWDMLKGGQLLVSLK--NHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSF 286          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE1_XENLA (Transducin-like enhancer protein 1 OS=Xenopus laevis GN=esg1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 52/205 (25.37%), Postives = 88/205 (42.93%), Query Frame = 1
Query:  154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765
            L  + D  + FSC  D    VW   N   +  ++GH     C D+S D   L TG  D T + W++  G QL   +F+S   S+ +   G+ LAV      +E+   +HV +            VL L+          +    +  +S G+D ++  W T  G  + +S + +    ++ S   + D    +TGS DK A +++
Sbjct:  577 LAISPDAKVCFSCCSDGNIVVWDLQNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRCWDLREGRQLQQHDFNSQIFSLGYCPTGEWLAVGMESSNIEV---LHVSKPDKYQLHLHESCVLSLQ----------FASCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSCDVSTDDQFIVTGSGDKKATVYE 764          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE1_MOUSE (Transducin-like enhancer protein 1 OS=Mus musculus GN=Tle1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 53/205 (25.85%), Postives = 88/205 (42.93%), Query Frame = 1
Query:  154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765
            L  + D  + FSC  D    VW   N   +  ++GH     C D+S D   L TG  D T + W++  G QL   +F S   S+ +   G+ LAV      +E+   +HV +            VL LK          +    +  +S G+D ++  W T  G  + +S + +    ++ S   + D  + +TGS DK A +++
Sbjct:  580 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV---LHVNKPDKYQLHLHESCVLSLK----------FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSCDISVDDKYIVTGSGDKKATVYE 767          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE1_HUMAN (Transducin-like enhancer protein 1 OS=Homo sapiens GN=TLE1 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 53/205 (25.85%), Postives = 88/205 (42.93%), Query Frame = 1
Query:  154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765
            L  + D  + FSC  D    VW   N   +  ++GH     C D+S D   L TG  D T + W++  G QL   +F S   S+ +   G+ LAV      +E+   +HV +            VL LK          +    +  +S G+D ++  W T  G  + +S + +    ++ S   + D  + +TGS DK A +++
Sbjct:  580 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV---LHVNKPDKYQLHLHESCVLSLK----------FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSCDISVDDKYIVTGSGDKKATVYE 767          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: NLE1_MOUSE (Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.253e-11
Identity = 60/225 (26.67%), Postives = 102/225 (45.33%), Query Frame = 1
Query:  121 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVE--TGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELIT 789
            ++ GH + +T L++  DG LL+S ++D T  VW A +G    T +GH   V    +S D   L TG+ +      N +   G+        S   ++    G +  V  +D F               PA+   + +  + G Q  I++ ++ P +R + SA  D  +++WD  TGK L       GH   +  +A +AD    ++GS D + K+WD +  +L T
Sbjct:  241 ILTGHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD-YALRTGAFEPAEATVNAQDLQGSLKELKERASSRYNLVRGQGPERLVSGSDDF---------TLFLWSPAEDK-KPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASL---RGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAT 450          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE4_RAT (Transducin-like enhancer protein 4 OS=Rattus norvegicus GN=Tle4 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.637e-11
Identity = 53/205 (25.85%), Postives = 89/205 (43.41%), Query Frame = 1
Query:  154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765
            L  + D  + FSC  D    VW   N   +  ++GH     C D+S D   L TG  D T + W++  G QL   +F S   S+ +   G+ LAV   +  +E+   +HV +            VL LK          +    +  +  G+D ++  W T  G  + +S + +    ++ S   +AD  + +TGS DK A +++
Sbjct:  558 LAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMENSNVEV---LHVTKPDKYQLHLHESCVLSLK----------FAHCGKWFVRPGKDNLLNAWRTPYGASIFQSKESS----SVLSCDISADDKYIVTGSGDKKATVYE 745          
The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
TLE4_XENLA9.596e-1225.85Transducin-like enhancer protein 4 OS=Xenopus laev... [more]
TLE4_MOUSE9.596e-1225.85Transducin-like enhancer protein 4 OS=Mus musculus... [more]
TLE4_HUMAN9.596e-1225.85Transducin-like enhancer protein 4 OS=Homo sapiens... [more]
UTP15_MOUSE1.253e-1125.00U3 small nucleolar RNA-associated protein 15 homol... [more]
UTP15_BOVIN1.253e-1125.00U3 small nucleolar RNA-associated protein 15 homol... [more]
TLE1_XENLA1.253e-1125.37Transducin-like enhancer protein 1 OS=Xenopus laev... [more]
TLE1_MOUSE1.253e-1125.85Transducin-like enhancer protein 1 OS=Mus musculus... [more]
TLE1_HUMAN1.253e-1125.85Transducin-like enhancer protein 1 OS=Homo sapiens... [more]
NLE1_MOUSE1.253e-1126.67Notchless protein homolog 1 OS=Mus musculus GN=Nle... [more]
TLE4_RAT1.637e-1125.85Transducin-like enhancer protein 4 OS=Rattus norve... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bp
CTCCCACTAGCTCTATCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCG
GAAACTCCATTCGTCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAA
AAGCAAGCATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACA
TATCTTAAATACAACAAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGA
TCACACACCCACCGTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCT
ACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCG
ATGACGCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGT
TGAAACAGGGGCTCAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGT
CTGTCGACTTTGCTGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCT
TTCATGGAATTAAACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCC
TGCTGATCAGAGTGGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAA
GAATAGACAGAGCAGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCT
GGAGAAGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCT
TAGAGAGTCGGACAAGGAAACTGGTCATAAAAAGACTATAACATCGCTTG
CAAAAGCTGCTGATGGATCACATTTCCTCACTGGTTCCCTTGATAAATCT
GCTAAGCTGTGGGATGCCAGAACACTGGAGCTTATCACGACCTATGTGAC
GG
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