CF834079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE3_HUMAN (Transducin-like enhancer protein 3 OS=Homo sapiens GN=TLE3 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.646e-11 Identity = 53/205 (25.85%), Postives = 88/205 (42.93%), Query Frame = 1 Query: 154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765 L + D + FSC D VW N + ++GH C D+S D L TG D T + W++ G QL +F S S+ + G+ LAV +E+ +H + VL LK + + +S G+D ++ W T G + +S + + ++ S +AD + +TGS DK A +++ Sbjct: 582 LAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV---LHHTKPDKYQLHLHESCVLSLK----------FAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSCDISADDKYIVTGSGDKKATVYE 769
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: TLE1_DANRE (Protein groucho-1 (Fragment) OS=Danio rerio GN=gro1 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.762e-11 Identity = 53/205 (25.85%), Postives = 87/205 (42.44%), Query Frame = 1 Query: 154 LKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765 L + D + FSC D VW N + ++GH C D+S D L TG D T + W++ G QL +F S S+ + G+ LAV +E+ +H + VL LK + +S G+D ++ W T G + +S + + ++ S +AD + +TGS DK A +++ Sbjct: 345 LAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISHDGPKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEV---LHHTKPDKYQLHLHESCVLSLKSAY----------CGKWFVSTGKDNLLNAWRTPYGASIFQSKESS----SVLSCDISADDKYIVTGSGDKKATVYE 532
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: SCON2_NEUCR (Sulfur controller 2 OS=Neurospora crassa GN=scon-2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.762e-11 Identity = 50/193 (25.91%), Postives = 88/193 (45.60%), Query Frame = 1 Query: 121 LMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSL 699 ++KGHE +T L+ D ++L + + D T +W + E + T GH + D LI+GS D T K+WN TG L TF + + G LA ++D +++ D + + LKG ++ +RT+ SA +D +++WD +T +++R + GH + + L Sbjct: 289 VLKGHENGVTCLQL--DDNILATGSYDTTIKIWNIETEECIRTLVGHTAGIRALQF--DDSKLISGSLDHTIKVWNWHTGECLSTFAAHTDSVISVHFDGHLLASGSSDKTVKI-------------FDFNSKETYCLKGHSDWVNSTHVDIKSRTVFSASDDTTIKLWDLDTRQVIRTYEGHVGHVQQVLIL 464
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11 Identity = 53/223 (23.77%), Postives = 98/223 (43.95%), Query Frame = 1 Query: 130 GHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFT-FNFDSPARSVDFAVGDKLAV-ITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITT 792 GH+ +T ++++ G+LL S ++D T +W D + ++ H V D S D L T S D++ K+W++ L++ + R F+ +L V + D +++ + K+ + +D G + + P G I SAG D V++WD KLL+ +G + ++ ++ +T S D + K+ D LI T Sbjct: 58 GHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTN-KQCVNNFSDSVGFANFVDFNPSG-----------TCIASAGSDQTVKVWDVRVNKLLQHYQVHSG---GVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYT 265
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: UTP15_XENLA (U3 small nucleolar RNA-associated protein 15 homolog OS=Xenopus laevis GN=utp15 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11 Identity = 51/213 (23.94%), Postives = 97/213 (45.54%), Query Frame = 1 Query: 160 YNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGR-IDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795 Y DG LL + +D ++ L + GH+ AV D + D +++GS D T+KLW++ G ++ ++ D+ + + D F S H ++ D+S ++ G+ ++ + P ++SAG V++WD G L S + H KT+T L ++ G L+GSLD+ K++ +++ ++ Sbjct: 88 YRGDGKLLAAGCEDSVVQLFDISGKAALRQFSGHSKAVHFVDFTSDKYRIVSGSDDYTSKLWDIPNGIEIASYK-----EHTDYIRCGCTSSLNNDLF-ATGSYDHTIKVFDGRTDKS-----VMSMDHGQPVESVLLFPSGGLLVSAG-GRYVKVWDILKGGQLLVSLR--NHHKTVTCLCLSSSGQRLLSGSLDRHVKVYSTMNYKVVHSF 286
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.220e-11 Identity = 54/216 (25.00%), Postives = 86/216 (39.81%), Query Frame = 1 Query: 130 GHERPLTYLKYNKDGDLLFSCAKDHTPTVW-FADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVE-TGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDAR 771 G +RPLT +++DG +L +C+ +W + + H S L T SAD+TAKLW + T Q F + D AR G L + D L +G +L+ +G + + S G D++ R+WD TG+ + GH K + S+ + +G H +G D ++WD R Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDI------------NTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQ---GHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLR 453 The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bpback to top |