CF834079

Overview
NameCF834079
Unique NameCF834079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_XENLA (Eukaryotic translation initiation factor 3 subunit I OS=Xenopus laevis GN=eif3i PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.518e-41
Identity = 89/231 (38.53%), Postives = 136/231 (58.87%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPIL++GHER +T +KYN+DGDLLF+ AKD    VW++ NGERLGTY GH GAVWC DV  ++  +++GSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +      +  E  + +   + +I  AVWGPL   II+  E+  +  +  ++G+++  S KE  H K I  +  + D + F+T S D ++KL+D+ +LE   T+ T
Sbjct:    1 MRPILLQGHERSITQIKYNRDGDLLFTVAKDPVVNVWYSVNGERLGTYNGHTGAVWCVDVDWETRHVLSGSADNSCRLWDCETGKQLALLQTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFIDLRDPSQIEDNEPYMKIPCSESKITSAVWGPLGENIIAGHENGELNHYSAKSGEIV-NSIKE--HSKQINDIQTSRDMTMFVTASKDCTSKLFDSTSLEHQKTFRT 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_ANOGA (Eukaryotic translation initiation factor 3 subunit I OS=Anopheles gambiae GN=AGAP006607 PE=3 SV=4)

HSP 1 Score: 169.859 bits (429), Expect = 1.518e-41
Identity = 89/234 (38.03%), Postives = 140/234 (59.83%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAG-DPADQSGESV--LILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+P++++GH+R +T +KYN++GDL+FS AKD  P+VW++ NGERLGT+ GH GAVWC DV   +  LITG+ D    LW+VETG  L     +S  R+ +F+     A  +TD  M     + V  +   D +  S + V  L +   Q +I   +WG L+ T+I+  E+  +RIWD    + ++E +    H  +IT +  ++DG+ F++ S D SAKL+D+ +L  + T+ T
Sbjct:    1 MKPLMLQGHQRAITQIKYNREGDLIFSSAKDSKPSVWYSLNGERLGTFNGHIGAVWCVDVDWTTTRLITGAGDMNTFLWDVETGTALGKIPCNSSVRTCNFSFSGNQASYSTDRAMNHPCELFVIDVRNIDASISSADPVLKLTMNEQQSKITSMLWGALDETVITGHENGSLRIWDL---RAVKELNSVNDHTASITDMQMSSDGTMFVSSSKDCSAKLFDSDSLMCLKTFKT 231          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_SCLS1 (Eukaryotic translation initiation factor 3 subunit I OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif34 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.416e-41
Identity = 93/232 (40.09%), Postives = 139/232 (59.91%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGD-PADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPIL++GHER LT ++YNKDGD++FS AKD     W+A NGERLGTY GH GA+W  DV   +  + +G+AD T +LW+V+TG  L T++F++  + V+F       +  T+  M     I V  I  D    QS +  L +   + +   A W  +++ II+  ED  V  +D++TG+LL  +       + +T L  + D ++F+T S DK+AKL +AR LE++ TYVT
Sbjct:    1 MRPILLQGHERALTQIRYNKDGDIIFSTAKDQHICAWYAHNGERLGTYHGHQGAIWTVDVDPTTTIIASGAADNTVRLWDVKTGKCLKTWDFNTAVKRVEFNEDATQLLAVTEQRMGFLGTIVVLDINLDVNGPQSDDRALTITCAESKATVAGWSYMSKYIIAGHEDGSVSQYDSKTGELLFNTQVHEPDLQ-VTDLQWSPDRTYFITASKDKTAKLVNARDLEVMKTYVT 231          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_CHAGB (Eukaryotic translation initiation factor 3 subunit I OS=Chaetomium globosum GN=TIF34 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.416e-41
Identity = 95/230 (41.30%), Postives = 136/230 (59.13%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDF-AVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPIL+ GHER LT +KYN DGDL+FS +KD    VWFA NGERLGTYRGH GA+W  DV   S  L +GSAD T +LW+++TG  L T++F +  + V+F   G KL  +T      L + + +       A+QS E V+ +   + +   A W  L++ II+  ED  V  +D +TG LL          + IT L  + D ++F+T S DK++KL  ++ LE++ +Y
Sbjct:    1 MRPILLAGHERALTQIKYNPDGDLIFSVSKDQQICVWFAHNGERLGTYRGHQGAIWTIDVDPTSTILASGSADNTIRLWDIKTGKCLKTWDFPTAVKRVEFNEDGTKLLGVTEKRMGHLGTIVVLDIKIDVEAEQSDEKVMTIVCDESKATVAGWSYLSKYIIAGHEDGSVSQYDGKTGDLLYNIPIHE-LNQPITDLQWSQDRTYFITASKDKTSKLISSKDLEVLKSY 229          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_NEUCR (Eukaryotic translation initiation factor 3 subunit I OS=Neurospora crassa GN=tif-34 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.533e-41
Identity = 95/230 (41.30%), Postives = 133/230 (57.83%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPIL+ GHER LT +KYN+DGDLLFS +KD    VWFA NGERLGTY GH GA+W  DV   S  L +GSAD T +LW ++TG  L T++F +  + V+F+  G KL  +T      L + + +       A+QS E  + +     +   A W  L++ II+  ED  V  +D + G LL          + IT L  + D ++F+T S DK++KL  A+ LE++ TY
Sbjct:    1 MRPILLSGHERALTQIKYNRDGDLLFSVSKDQQICVWFAHNGERLGTYHGHQGAIWTIDVDPTSTILASGSADNTIRLWEIKTGRLLKTWDFPTAVKRVEFSEDGSKLLGVTEKRMGHLGTIVVLDIKLDVDAEQSDEKAMTIVCEDSKATVAGWSYLSKYIIAGHEDGSVSQFDGKNGDLLYNIPIHE-LNQPITDLQWSHDRTYFITASKDKTSKLITAKDLEVLKTY 229          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_MOUSE (Eukaryotic translation initiation factor 3 subunit I OS=Mus musculus GN=Eif3i PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.533e-41
Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+PIL++GHER +T +KYN++GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       S E  + +     +I  AVWGPL   +I+  E   +  +  ++G++L    +   H + I  +  + D + F+T S D +AKL+D+ TLE   T+ T
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDSNEPYMKIPCNDSKITSAVWGPLGECVIAGHESGELNQYSAKSGEVLVNVKE---HSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRT 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_BOVIN (Eukaryotic translation initiation factor 3 subunit I OS=Bos taurus GN=EIF3I PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.533e-41
Identity = 88/231 (38.10%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+PIL++GHER +T +KYN++GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       S E  + +     +I  AVWGPL   II+  E   +  +  ++G++L    +   H + I  +  + D + F+T S D +AKL+D+ TLE   T+ T
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDSNEPYMRIPCNDSKITSAVWGPLGECIIAGHEGGELNQYSAKSGEVLVNVKE---HSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRT 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_EMENI (Eukaryotic translation initiation factor 3 subunit I OS=Emericella nidulans GN=tif34 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.838e-41
Identity = 96/232 (41.38%), Postives = 134/232 (57.76%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI--AGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL+ GHER L  +K+N+DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD + +LWNV+TG  +  + F +  + V+F+      +  T+  M     I V  I   GD  +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L E+ +       I  L  + D +HFLT S DKSAKL  +R L ++ TYV
Sbjct:    1 MRPILLAGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHLGAIWTVDVSPNTVLLATGSADNSVRLWNVKTGECVKVWEFPTAVKRVEFSPDGSKVLAVTEKRMGFLGTIAVLDINYDGDFTNQAEEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDAKTGEQL-ENVQAHEFDHQINDLQFSPDRTHFLTASKDKSAKLMSSRNLAILKTYV 231          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_TAEGU (Eukaryotic translation initiation factor 3 subunit I OS=Taeniopygia guttata GN=EIF3I PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 1.285e-40
Identity = 86/231 (37.23%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+PIL++GHER +T +KYN++GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL      S  R+  F  G  + + +TD  M     +    +      ++ E  + +     +I  AVWGPL   II+  E+  +  +  ++G+ L    +   H K I  +  + D + F+T S D +AKL+D  +L+ + T+ T
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYNGHTGAVWCVDADWDTRHVLTGSADNSCRLWDCETGKQLALVKTSSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIENNEPYMKIPCSDSKITSAVWGPLGEFIIAGHENGELNQFSAKSGEQLSNIKE---HTKQINDIQTSRDMTMFITASKDNTAKLFDCTSLKHLKTFRT 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_PONAB (Eukaryotic translation initiation factor 3 subunit I OS=Pongo abelii GN=EIF3I PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.285e-40
Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+PIL++GHER +T +KYN++GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       + E  + +     +I  AVWGPL   II+  E   +  +  ++G++L    +   H + I  +  + D + F+T S D +AKL+D+ TLE   T+ T
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGSIIMFSTDKQMGYQCFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKE---HSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRT 228          
The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
EIF3I_XENLA1.518e-4138.53Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ANOGA1.518e-4138.03Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_SCLS14.416e-4140.09Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CHAGB4.416e-4141.30Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_NEUCR7.533e-4141.30Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_MOUSE7.533e-4137.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_BOVIN7.533e-4138.10Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_EMENI9.838e-4141.38Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_TAEGU1.285e-4037.23Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_PONAB1.285e-4037.66Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bp
CTCCCACTAGCTCTATCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCG
GAAACTCCATTCGTCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAA
AAGCAAGCATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACA
TATCTTAAATACAACAAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGA
TCACACACCCACCGTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCT
ACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCG
ATGACGCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGT
TGAAACAGGGGCTCAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGT
CTGTCGACTTTGCTGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCT
TTCATGGAATTAAACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCC
TGCTGATCAGAGTGGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAA
GAATAGACAGAGCAGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCT
GGAGAAGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCT
TAGAGAGTCGGACAAGGAAACTGGTCATAAAAAGACTATAACATCGCTTG
CAAAAGCTGCTGATGGATCACATTTCCTCACTGGTTCCCTTGATAAATCT
GCTAAGCTGTGGGATGCCAGAACACTGGAGCTTATCACGACCTATGTGAC
GG
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