CF834079

Overview
NameCF834079
Unique NameCF834079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_HUMAN (Eukaryotic translation initiation factor 3 subunit I OS=Homo sapiens GN=EIF3I PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.285e-40
Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+PIL++GHER +T +KYN++GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       + E  + +     +I  AVWGPL   II+  E   +  +  ++G++L    +   H + I  +  + D + F+T S D +AKL+D+ TLE   T+ T
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKE---HSRQINDIQLSRDMTMFVTASKDNTAKLFDSTTLEHQKTFRT 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_BOTFB (Eukaryotic translation initiation factor 3 subunit I OS=Botryotinia fuckeliana (strain B05.10) GN=tif34 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.285e-40
Identity = 92/232 (39.66%), Postives = 138/232 (59.48%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGD-PADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPIL++GHER LT ++YN+DGD++FS AKD     W+A NGERLGTY GH GA+W  DV   +  + +G+AD T +LW+V+TG  L T++F++  + V+F       +  T+  M     I V  I  D    QS +  L +   + +   A W  +++ II+  ED  V  +D +TG+LL  +       + +T L  + D ++F+T S DK+AKL +AR LE++ TYVT
Sbjct:    1 MRPILLQGHERALTQIRYNRDGDIIFSTAKDQHICAWYAHNGERLGTYHGHQGAIWTVDVDPTTTIIASGAADNTVRLWDVKTGKCLKTWDFNTAVKRVEFNEDATQLLAVTEQRMGFLGTIVVLDINLDVNGPQSDDRALTITCAESKATVAGWSYMSKYIIAGHEDGSVSQYDAKTGELLFNTQVHEPDLQ-VTDLQWSPDRTYFITASKDKTAKLVNARDLEVMKTYVT 231          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_RAT (Eukaryotic translation initiation factor 3 subunit I OS=Rattus norvegicus GN=Eif3i PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.678e-40
Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+PIL++GHER +T +KYN++GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       S E  + +     +I  AVWGPL   II+  E   +  +  ++G++L    +   H + I  +  + D + F+T S D +AKL+D+ +LE   T+ T
Sbjct:    1 MKPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDSNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKE---HSRQINDIQLSRDMTMFVTASKDNTAKLFDSTSLEHQKTFRT 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_RABIT (Eukaryotic translation initiation factor 3 subunit I OS=Oryctolagus cuniculus GN=EIF3I PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.678e-40
Identity = 87/231 (37.66%), Postives = 131/231 (56.71%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPIL++GHER +T +KYN++GDLLF+ AKD    VW++ NGERLGTY GH GAVWC D   D+  ++TGSAD + +LW+ ETG QL     +S  R+  F  G  + + +TD  M     +    +       + E  + +     +I  AVWGPL   II+  E   +  +  ++G++L    +   H + I  +  + + + F+T S D +AKL+D+ TLE   T+ T
Sbjct:    1 MRPILLQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVDADWDTKHVLTGSADNSCRLWDCETGKQLALLKTNSAVRTCGFDFGGNIIMFSTDKQMGYQCFVSFFDLRDPSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELNQYSAKSGEVLVNVKE---HSRQINDIQLSREMTMFVTASKDNTAKLFDSTTLEHQKTFRT 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_NEMVE (Eukaryotic translation initiation factor 3 subunit I OS=Nematostella vectensis GN=v1g239264 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.883e-40
Identity = 86/231 (37.23%), Postives = 128/231 (55.41%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+P+ + GHER +T +KYN+ GDLLFS AKD  PTVW++ NGERLGTY GH GAVWC DV+ D+   I+G AD   +LW+ E G  L      S  R+  F+ G    +++TD  M  +  I    +  D  D     +L +     ++   +WGPL++ +++  E+  +  WD ++G  L    +   H K I  +    D + F+T S D +AKL+D  +L  + TY T
Sbjct:    1 MKPLALHGHERNITQIKYNRMGDLLFSAAKDTRPTVWYSLNGERLGTYNGHGGAVWCIDVNYDTTQFISGGADNCLRLWDCEKGVTLSKIETKSAVRTCGFSYGGNEIMLSTDRQMGQSCRI----LIFDVRDNMESPILTIPVDNSKVTAGLWGPLDQFLVTGHENGELCQWDVKSGNKLISVQE---HSKQINDIQMYKDSTMFVTASKDTTAKLFDTDSLRHLKTYKT 224          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPOR (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus oryzae GN=tif34 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.883e-40
Identity = 93/231 (40.26%), Postives = 136/231 (58.87%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPAD-QSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL+ GHER L  +K+N+DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V+F       +  T+  M     I V  I  +  + Q+ E  L +   + +   A W  L + II+  ED  V  +D++TG+ L E+ +       I+ +  +AD ++F+T S DKSAKL  +R L ++ TYV
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYNGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECIKVWDFPTAVKRVEFTPDGSRLLAVTEKRMGFLGTIAVLDINYEDLEAQAEEPSLRITCTESKATVAGWSYLAKYIIAGHEDGSVSQYDSKTGEQL-ENVQAHEFDNLISDIQFSADRTYFITASKDKSAKLISSRNLAILKTYV 230          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPTN (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=tif34 PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.088e-39
Identity = 94/232 (40.52%), Postives = 135/232 (58.19%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDP--ADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL+ GHER LT +K+N+DGDLLFS +KD     W+  NGERLGTY GH GAVW  DVS +++ L TGSAD + +LWNV+TG  +  + F +  + V+F+      +  T+  M    AI V  I+ +    +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG  L E+ +       I  +  +AD ++F+T S DKSAKL  +R L ++ TYV
Sbjct:    1 MRPILLSGHERSLTQIKFNRDGDLLFSVSKDKIVCAWWTANGERLGTYNGHLGAVWTVDVSPNTVLLATGSADNSVRLWNVKTGECVKVWEFPTAVKRVEFSPDGSQLLAVTEKRMGFLGAISVLDISYEDNFQNQADEPSLRITCNESKATVAGWSYLGKYIIAGHEDGSVSQYDAKTGDQL-ENVQAHEFDHQINDIQFSADRTYFITASKDKSAKLISSRNLAILKTYV 231          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_YARLI (Eukaryotic translation initiation factor 3 subunit I OS=Yarrowia lipolytica GN=TIF34 PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.165e-39
Identity = 91/234 (38.89%), Postives = 138/234 (58.97%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGD-PADQSGESVLILKGPQG--RIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPIL++GHERPLT LKYN++GDLLFS A+D T  VW++ NGERLGT  G  GA +  D    +  + TGSADQTA+LW+++TG  + ++NF +  + V+F+      ++ ++  M     I V  +  D  A Q  E ++ +K  +G  +   AVW    + II+A  D  +  +D  TG+ +  S +    K  IT L  + D ++ +T S DK+A+L D  +L+L+ TY T
Sbjct:    1 MRPILLQGHERPLTQLKYNREGDLLFSVARDKTICVWYSHNGERLGTLEGSGGANFSVDADPTTTIVATGSADQTARLWDIKTGKTIHSWNFKTTVKRVEFSPDGTKLIVLSEKMMGYPGGISVFNVKADVNATQETEPIMDIKPEEGADKFSFAVWSYGGKYIITAHADGSLSKYDGATGEFI-ASTQIHEEKFPITDLQPSPDKTYVITSSKDKTARLTDVDSLKLLKTYKT 233          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_MAGGR (Eukaryotic translation initiation factor 3 subunit I OS=Magnaporthe grisea GN=TIF34 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.051e-39
Identity = 93/230 (40.43%), Postives = 129/230 (56.09%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPIL+ GHER LT +K+N DGDL+FS AKD    VWFA NGERLGTY GH GA+W  D    S  + TGSAD T KLW ++TG  L T+ F +  + V+F+  G +L  +T      L + + +       A+Q+ E  + +   + +   A W  L + II+  ED  V  +D + G  L  S +       I  L  + D ++F+T S DK+AKL  AR LE++ TY
Sbjct:    1 MRPILLSGHERALTQVKFNPDGDLIFSVAKDQHICVWFAHNGERLGTYHGHQGAIWTVDCDPTSTIIATGSADNTIKLWEIKTGRCLHTWEFPTAVKRVEFSPDGTRLLGVTEKRMGHLGTIVVLDVKLDVDAEQNPERAMTIVCDESKATVAGWSYLAKYIIAGHEDGSVSQYDAKNGDQL-HSVQIHDMGSEIRDLQWSQDRTYFITASKDKTAKLVTARDLEVLKTY 229          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_CRYNE (Eukaryotic translation initiation factor 3 subunit I OS=Cryptococcus neoformans GN=TIF34 PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.051e-39
Identity = 87/238 (36.55%), Postives = 132/238 (55.46%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTY------RGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI-AGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+PI+++GHER L  + +N +GDLLFS +KD     W+  NGERLGTY       GHNG+VW   V   +  L+TG AD   KLW V+TG  L+T+ F +  + V +   D + +  T+      S I +  I   DP  QS   +  ++    R   A+W PL+  II+  E   +  +D +TG+ ++  + E  H   I+ +  + DG++F+T S DK+A+LWD  TLE++  Y T
Sbjct:    1 MKPIILQGHERSLNQIVFNSEGDLLFSASKDSVVNAWYTSNGERLGTYGGIKGGDGHNGSVWTVAVDSQTRFLLTGGADNAMKLWEVKTGECLYTWEFLTAVKRVAWNEDDDMFLSITEQRSGQPSVIRIFSINREDPRSQSTTPITEMRLSGSRATVAIWAPLSDYIITGHESGKIAKYDVKTGEEVQAVEDE--HSALISDIQLSPDGTYFITASKDKTARLWDIETLEVMKVYTT 236          
The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
EIF3I_HUMAN1.285e-4037.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_BOTFB1.285e-4039.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_RAT1.678e-4037.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_RABIT1.678e-4037.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_NEMVE4.883e-4037.23Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPOR4.883e-4040.26Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPTN1.088e-3940.52Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_YARLI3.165e-3938.89Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_MAGGR7.051e-3940.43Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CRYNE7.051e-3936.55Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bp
CTCCCACTAGCTCTATCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCG
GAAACTCCATTCGTCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAA
AAGCAAGCATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACA
TATCTTAAATACAACAAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGA
TCACACACCCACCGTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCT
ACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCG
ATGACGCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGT
TGAAACAGGGGCTCAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGT
CTGTCGACTTTGCTGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCT
TTCATGGAATTAAACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCC
TGCTGATCAGAGTGGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAA
GAATAGACAGAGCAGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCT
GGAGAAGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCT
TAGAGAGTCGGACAAGGAAACTGGTCATAAAAAGACTATAACATCGCTTG
CAAAAGCTGCTGATGGATCACATTTCCTCACTGGTTCCCTTGATAAATCT
GCTAAGCTGTGGGATGCCAGAACACTGGAGCTTATCACGACCTATGTGAC
GG
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