CF834079

Overview
NameCF834079
Unique NameCF834079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_NEOFI (Eukaryotic translation initiation factor 3 subunit I OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif34 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.208e-39
Identity = 93/236 (39.41%), Postives = 134/236 (56.78%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIA------GDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL+ GHER L  +K+N+DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V+F       +  T+  M     I V  I+      G   +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L E+ +       I  +  + D ++F+T S DKSAKL  +R L ++ TYV
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPTAVKRVEFNPDGSRLLAVTEKRMGFLGTIAVLDISYGDSQGGALENQADEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDGKTGEQL-ENVQAHEFDHQINDIQFSQDRTYFITASKDKSAKLISSRNLAILKTYV 235          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_PICGU (Eukaryotic translation initiation factor 3 subunit I OS=Pichia guilliermondii GN=TIF34 PE=3 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 2.051e-38
Identity = 92/237 (38.82%), Postives = 132/237 (55.70%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAG-DPADQSGESVLILKGPQG--RIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKK----TITSLAKA-ADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRP  + GHER LT +KYN++GDLLFS AKD + +VWFA NGERLGT+ GH G +W  DV  ++   +TGSAD T KLW VETG  ++T+   +P R V F+  +   +  TD  M     I V  +   +P +QS +  L++    G  ++  A W    + II+  ED +V  +D  TG+ +        H +     +T +  A  D S+F+T S DK + L D  TLE++  Y
Sbjct:    1 MRPFKLMGHERSLTQVKYNQEGDLLFSVAKDSSASVWFASNGERLGTFEGHMGTIWSIDVDSNTHYAVTGSADLTIKLWLVETGECVYTYEMPTPVRRVVFSPDNSKLLSVTDQVMGQVGTISVFDVNNEEPKNQSSKPSLVIPTRDGAKKVTIAGWSAGGKYIIAGHEDGLVSKYDGATGEFIDSVQAHGIHNEEKIHLVTDIQFAPEDKSYFITSSKDKCSCLIDVETLEIMKVY 237          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPFU (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus fumigatus GN=tif34 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.679e-38
Identity = 93/236 (39.41%), Postives = 132/236 (55.93%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI------AGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL+ GHER L  +K+N+DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V F       +  T+  M     I V  I       G   +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L E+ +       I  +  + D ++F+T S DKSAKL  +R L ++ TYV
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPTAVKRVAFNPDGSRLLAVTEKRMGFLGTIAVLDINYGDSQGGGLENQADEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDGKTGEQL-ENVQAHEFDHQINDIQFSQDRTYFITASKDKSAKLISSRNLAILKTYV 235          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPFC (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=tif34 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.679e-38
Identity = 93/236 (39.41%), Postives = 132/236 (55.93%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI------AGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL+ GHER L  +K+N+DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V F       +  T+  M     I V  I       G   +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L E+ +       I  +  + D ++F+T S DKSAKL  +R L ++ TYV
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVAKDKIVCAWWSANGERLGTYSGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPTAVKRVAFNPDGSRLLAVTEKRMGFLGTIAVLDINYGDSQGGGLENQADEPSLRITCTESKATVAGWSYLGKYIIAGHEDGSVSQYDGKTGEQL-ENVQAHEFDHQINDIQFSQDRTYFITASKDKSAKLISSRNLAILKTYV 235          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_PICST (Eukaryotic translation initiation factor 3 subunit I OS=Pichia stipitis GN=TIF34 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.018e-37
Identity = 92/239 (38.49%), Postives = 127/239 (53.14%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDP---ADQSGESVLILKGPQ--GRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKK----TITSLAKAA-DGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPI + GHER LT +KYN++GDLLFS AKD+  ++W++ NGERLGT  GH G +W  DV  D+    TG  D   KLW VETG  +FT+   SP R V F+      +   D  M     I V  I  D     +QS E  L+++ PQ   +   A W      IIS  +D  +  +D +TG+ +   +    H +    T+T +  AA D S+F+T S DK + L D  T E++  Y
Sbjct:    1 MRPIKLMGHERSLTQVKYNREGDLLFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSIDVDPDTHLCATGGGDLAIKLWKVETGKCVFTWESPSPVRRVAFSPDGSRLLAIADQVMGHIGTIVVYEINHDDESLTNQSTEPSLVIETPQDGAKATVAGWSANGEFIISGHDDGYIYKYDAQTGEAVNSLEAHGIHTEEKNVTVTDIQFAAEDRSYFITSSKDKCSTLIDVDTFEILKVY 239          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_LODEL (Eukaryotic translation initiation factor 3 subunit I OS=Lodderomyces elongisporus GN=TIF34 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.737e-37
Identity = 90/239 (37.66%), Postives = 130/239 (54.39%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPA---DQSGESVLILKGPQ--GRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKK----TITSLAKA-ADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPI + GHER LT +KYN++GDLLFS AKD+  ++W++ NGERLGT  GH G +W  DV  +++   TG  D   KLW VE G  ++T+N  SP R V F+   K  ++  D  M     I V  I  D A   +Q+  + L+++  Q   +   A W    R II+  ++  V  +D  TG+LL+       H +    ++T +  A  D S+F+T S DK A L D  T E++  Y
Sbjct:    1 MRPIKLMGHERSLTQVKYNREGDLLFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSIDVDPETLLCATGGGDLAVKLWTVENGQCVYTWNSPSPVRRVSFSPDGKKLLVIADQVMGHIGTISVYDINRDTASLTNQAETASLVIETEQNGSKATVAGWSEDGRFIIAGHDNGYVSKYDAHTGELLKSLQAHGIHNEEKNVSVTDIQFAPEDRSYFITSSKDKCAVLTDVDTFEILKVY 239          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_COCIM (Eukaryotic translation initiation factor 3 subunit I OS=Coccidioides immitis GN=TIF34 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.737e-37
Identity = 90/236 (38.14%), Postives = 134/236 (56.78%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPA-----DQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL++GHER L  +++N DGDLLFS AKD     W++ NGERLGTY GH GA+W  DVS  ++ L TG+AD T +LWN ++G  +  ++F +  + V+F+  G +L  +T      L + +      GD       DQ+ E  L +   Q +   A W  L + II+  ED  V  +D++TG+ L+           I  L  +AD ++F+T S DKSAK+   R L+++ T+V
Sbjct:    1 MRPILLQGHERSLNQIRFNHDGDLLFSVAKDKILCAWYSANGERLGTYHGHQGALWTVDVSPGTVLLATGAADNTVRLWNAKSGECVKVWDFPTAVKRVEFSPDGSRLLAVTEKRMGYLGTIVVFDVRYGDGEGNNLDDQTDEPSLKITCEQSKATVAGWSFLGKYIIAGHEDGSVSQYDSKTGEQLQNVQAHE-FDYQINDLQFSADRTYFITASKDKSAKIISCRDLQVMKTFV 235          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPCL (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus clavatus GN=tif34 PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.737e-37
Identity = 92/236 (38.98%), Postives = 132/236 (55.93%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI------AGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL+ GHER L  +K+N+DGDLLFS +KD     W++ NGERLGTY GH GA+W  DVS +++ L TGSAD T +LWNV+TG  +  ++F +  + V F+      +  T+  M     I V  I        D  +Q+ E  L +   + +   A W  L + II+  ED  V  +D +TG+ L E+ +       I  +  + D + F+T S DKSAKL  +R L ++ TYV
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLLFSVSKDKVVCAWWSANGERLGTYTGHQGAIWTVDVSPNTVLLATGSADNTVRLWNVKTGECVKVWDFPTAVKRVAFSPDGSKLLAVTEKRMGFLGTIAVFDINYGNGQGEDLENQAEEPSLRITCSESKATVAGWSYLGKYIIAGHEDGSVSQYDGKTGEQL-ENVQAHEFDHQINDIQFSQDRTCFITASKDKSAKLISSRNLAILKTYV 235          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_BRUMA (Eukaryotic translation initiation factor 3 subunit I OS=Brugia malayi GN=Bm1_48300 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.962e-37
Identity = 87/230 (37.83%), Postives = 128/230 (55.65%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGES-VLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            M+P+ +KGH+R LT ++ N+DGDLLFS  KD +P VW+ +NGER+GTY GHNG +W  DVS D+    + S D   KLWN ETG  + + +  + ARS+  +    L   TT    +  +++ V  I  D +  SGE+     K  Q + +  VW  L+ T+    E   V  +D   G  +   + E  HK  I  +  + D S  +T S DK+A+L+DARTL+ + TY
Sbjct:    1 MKPLSLKGHDRALTRVRINRDGDLLFSAGKDKSPCVWYMENGERIGTYDGHNGVIWDIDVSWDTRHFCSASGDVFVKLWNCETGDVINSVSTPTAARSISLSYSGNLIAFTTIKMTQNVASLFVYDIR-DGSQMSGENQPTFRKSLQTQANSCVWTHLDDTVCVGNEKGNVHQYDIRKGDDIVNFNDE-AHKFQINDMQMSTDESFLITASKDKTARLFDARTLDCLKTY 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_VANPO (Eukaryotic translation initiation factor 3 subunit I OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF34 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.869e-37
Identity = 80/236 (33.90%), Postives = 133/236 (56.36%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQS-----GESVLILKGPQGR--IDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPI++ GHERPLT +KYNK+GDL+FSC+KD   +VW++ NGERLGT  GH G +W  DV   + + +TGSAD + K+W V+TG  + T+    P + V+F+      +   D  M    +I+V +++ DP  +       E +L++   +    +  A W    + II+  +D  V  ++ +TG+ +   +    H +TI  +  + D ++F+T S D  A + D  ++E + +Y
Sbjct:    1 MRPIMLVGHERPLTQVKYNKEGDLVFSCSKDSVASVWYSINGERLGTLEGHTGTIWSIDVDPFTESCVTGSADYSIKVWKVQTGTVIHTWTAPVPIKRVEFSPCGDYILAVLDDVMRYPGSINVYKVSRDPVTKEIKEFVEEPILVINTQENHKGVTVAGWSAEGKYIIACHKDGKVSKYNAKTGEFITSIEL---HTQTIGDIQFSPDRTYFITSSRDSMAYILDVESMEQLKSY 233          
The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
EIF3I_NEOFI9.208e-3939.41Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_PICGU2.051e-3838.82Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPFU2.679e-3839.41Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPFC2.679e-3839.41Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_PICST1.018e-3738.49Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_LODEL1.737e-3737.66Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_COCIM1.737e-3738.14Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPCL1.737e-3738.98Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_BRUMA2.962e-3737.83Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_VANPO3.869e-3733.90Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bp
CTCCCACTAGCTCTATCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCG
GAAACTCCATTCGTCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAA
AAGCAAGCATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACA
TATCTTAAATACAACAAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGA
TCACACACCCACCGTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCT
ACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCG
ATGACGCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGT
TGAAACAGGGGCTCAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGT
CTGTCGACTTTGCTGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCT
TTCATGGAATTAAACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCC
TGCTGATCAGAGTGGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAA
GAATAGACAGAGCAGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCT
GGAGAAGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCT
TAGAGAGTCGGACAAGGAAACTGGTCATAAAAAGACTATAACATCGCTTG
CAAAAGCTGCTGATGGATCACATTTCCTCACTGGTTCCCTTGATAAATCT
GCTAAGCTGTGGGATGCCAGAACACTGGAGCTTATCACGACCTATGTGAC
GG
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