CF834079

Overview
NameCF834079
Unique NameCF834079
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_CANGA (Eukaryotic translation initiation factor 3 subunit I OS=Candida glabrata GN=TIF34 PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.920e-36
Identity = 83/239 (34.73%), Postives = 136/239 (56.90%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDP--------ADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPI++ GHERPLT +KYN++GDLLF+C+KD + +VW+++NGERLGT  GH G++W  D    S+  +TGSAD T K+W +  G  + T+N   P + V+F+   K  +   D  M+   +I +  +  +P         ++   S++  +G       A W    + II+  +D  +  +DT+ G  L ES +   HK +++ L  + D ++F+T S D +A + D  T +++ TY T
Sbjct:    1 MRPIVLMGHERPLTQVKYNREGDLLFTCSKDISASVWYSNNGERLGTLDGHMGSIWSIDSDHTSLYCVTGSADYTIKVWTLMNGQCVQTWNCPVPVKRVEFSPCGKYILAILDNVMKKPGSIEIYEVKRNPETNEITEFVEEPIHSIVTHEGLDA-ASVAGWSGEGKYIIAGHKDGKISKYDTQDGYKLVESQQV--HKDSVSDLQFSPDRTYFITCSRDSNAHIIDIETFKVLKTYET 236          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_DEBHA (Eukaryotic translation initiation factor 3 subunit I OS=Debaryomyces hansenii GN=TIF34 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.508e-36
Identity = 90/238 (37.82%), Postives = 130/238 (54.62%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRI--AGDPADQSGESVLIL--KGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKK----TITSLAKA-ADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPI + GHER LT +K+N++GDL+FS AKD T ++W++ NGERLGT  GH G +W  DV  D++   TGSAD T KLW +ETG  + ++   +P R V F+  +K  +  TD  M     I V  I   GD   Q  +  LI+  +    ++  A W      II+  ED  V  +++ TG+ +  +     H +    +IT +  A  D S+ +T S DK + L D  TLEL+  Y
Sbjct:    1 MRPIKLMGHERSLTQVKFNREGDLIFSVAKDSTASIWYSSNGERLGTLEGHIGTIWSIDVDADTILCATGSADLTIKLWKIETGECVQSWEMPTPVRRVAFSPDNKRLLAVTDQVMGQTGTISVFDINYEGDYTKQQSKPSLIIETRSDAKKVTVAGWSANGDFIIAGHEDGYVSKYNSSTGEFIETAQVHGIHNEEKIASITDIQFAPEDKSYIVTASKDKCSCLVDVDTLELMKVY 238          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_ASPNC (Eukaryotic translation initiation factor 3 subunit I OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tif34 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.275e-36
Identity = 87/240 (36.25%), Postives = 132/240 (55.00%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDF----------AVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYV 798
            MRPIL+ GHER L  +K+N+DGDL+FS AKD     W++ NGERLGTY GH GA+W  DVS ++  L TGSAD T +LWNV+TG  +  ++F +  + V                ++  + T   +++N   ++        +Q+ E  L +   + +   A W  + + II+  ED  V  +D +TG+ L E+ +       I  +  +AD ++F+T S DKSAKL   R L ++ TYV
Sbjct:    1 MRPILLSGHERSLNQIKFNRDGDLIFSVAKDKIVCAWWSANGERLGTYNGHQGAIWTVDVSPNTQILATGSADNTVRLWNVKTGECIKVWDFPTAVKRVRVHPPMEADCWPVTEKRMGFLGTIAVLDINYGENL-------TEQAEEPSLRITCTESKATVAGWSYMGKYIIAGHEDGSVSQYDGKTGEQL-ENVQAHEFDHQINDIQFSADRTYFITASKDKSAKLMSTRNLAILKTYV 232          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_CANAL (Eukaryotic translation initiation factor 3 subunit I OS=Candida albicans GN=TIF34 PE=3 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 6.177e-35
Identity = 89/239 (37.24%), Postives = 125/239 (52.30%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPA---DQSGESVLIL--KGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKK----TITSLAKA-ADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPI + GHER LT +KYN++GDLLFS AKD+  ++W++ NGERLGT  GH G +W  DV  ++    TG  D   KLW VE G  ++T++  SP R V F+   K  +   D  M     + V  I  D A    Q  E  L++  K    +   A W      II   ++  V  +D++TGKL+        H +    +IT +  A  D S+F+T S DK+A L D  T E++  Y
Sbjct:    1 MRPIKLMGHERSLTQVKYNREGDLLFSVAKDNAASIWYSSNGERLGTLEGHQGVIWSIDVDPETHLCATGGGDLAIKLWKVENGQCVYTWDSPSPVRRVAFSPDGKKLLAIADQVMGHIGTVSVFDINDDDATLSQQKAEPSLVIETKSEGSKATVAGWSGDGDYIIVGHDNGYVSKYDSKTGKLVTSLQAHGIHNEEKNVSITDIQFAPEDRSYFITSSKDKTATLIDVDTFEILKVY 239          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_ASHGO (Eukaryotic translation initiation factor 3 subunit I OS=Ashbya gossypii GN=TIF34 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.376e-34
Identity = 87/238 (36.55%), Postives = 135/238 (56.72%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQ-----SGESVLIL-KGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPI++ GHER LT +KYN++GDL+F+  KD+  +VW+A NGERLGT  GHNG++W  DV + +   +TGSAD + K+W V  G+   +++  +P R V+F+  GD++  +  D  M    AI V  +  D  +Q     SG S  IL +     +  A W    + I++  +D  +  ++  TG+ L   D    HK+ ++ +  + D ++FLT S D  A L D  T E++ TY T
Sbjct:    1 MRPIMLMGHERSLTQVKYNREGDLIFTSGKDNVASVWYAMNGERLGTLEGHNGSIWSIDVDQHTEYAVTGSADFSVKVWRVRDGSIAHSWDTRTPVRRVEFSPTGDRVLAV-LDNVMNYAGAIVVFSVTRDANNQITGFNSGLSCEILTQEGCAPVLVASWSYDGKYIVAGHQDGKISKYNGVTGECLEIKDL---HKQRVSDIQFSLDRTYFLTTSRDSYANLVDVETFEVLKTYET 234          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_KLULA (Eukaryotic translation initiation factor 3 subunit I OS=Kluyveromyces lactis GN=TIF34 PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.829e-34
Identity = 82/239 (34.31%), Postives = 129/239 (53.97%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDR---------AVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRPI++KGHERPLT +K+N+DGDL+F+C+KD   ++W+A NGERLGT   H+G +W  DV   +   +TG AD   K+W V TG  + + +  SP   V+F+  G KL ++       + S +    I     +++GE V + + P   I           A W    + II+  ED  +  +  E G+ ++    +  H+K+I  +  + D ++F+T S D  A L D  T E++ TY
Sbjct:    1 MRPIVLKGHERPLTQVKFNRDGDLVFACSKDSVASIWYAINGERLGTLDDHSGTIWSIDVDESTTYALTGGADFCFKIWKVATGVAVHSVSTRSPVLRVEFSPDGSKLLIVLDAVMGHIGSIVVYSLI----RNENGEIVNVKEEPDYEITTIEQATKVFVASWSYNGKYIIAGHEDGQISAYYGENGEFVQ---AKKIHEKSIKDIQFSPDRTYFITSSRDSVASLVDVDTFEVLKTY 232          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_CAEBR (Eukaryotic translation initiation factor 3 subunit I OS=Caenorhabditis briggsae GN=eif-3.I PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.829e-34
Identity = 79/234 (33.76%), Postives = 120/234 (51.28%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESD-----KETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRP+ +KGHER LT +++N++GDL FSCAKD  P VW+ +NGER+G+Y GHNGAVW  DVS D+   +T S D T K+W+ E G+ ++T N  +P +S  F+    L   TT    +  S + V+ +        G               A++  ++  I    E  +++ +D      LR  D      E  H+ +I  L  +  G   ++ S DK+A L D   L+ +  Y
Sbjct:    1 MRPLSLKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDVSWDTSKCVTASGDLTVKIWDAELGSCIYTINHQTPMKSCGFSYSGNLVCYTTQKMTKNLSTVQVRDLRDGNQMAEGAESFFSTQFDVNATTALFSQMDDIITIGFESGLLQQYD------LRNPDSPINTNEVVHRYSIQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQY 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_PHANO (Eukaryotic translation initiation factor 3 subunit I OS=Phaeosphaeria nodorum GN=TIF34 PE=3 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.987e-33
Identity = 91/232 (39.22%), Postives = 125/232 (53.88%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDP-ADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            MRPIL+ GHER LT +KYN DGD++FS +KDH      + NGER+GTY GH GA+W  DV+ DS  L TG AD T +LW V+TG  L T+ F++  +  +F+   +  +  T+      S I V  I  DP A QS E VL +   + +   A +  L + IIS  ED  V  WD +TG+LL  S     H+  +   A A     F    +    +L D   L ++ +YVT
Sbjct:    1 MRPILLSGHERALTQVKYNGDGDIIFSVSKDHVDAD--SHNGERIGTYHGHQGALWTVDVNPDSTLLATGGADNTLRLWEVQTGKLLHTWEFNTSIKRCEFSPDGRQLLGVTEKRSGHLSTIVVYEINPDPEAKQSDEQVLRIVCDESKATVAGFSYLAKYIISGHEDGSVTQWDGKTGELL--SSNYDVHEPDMQGYALATKHVRFDANRV----QLVDVEDLTVLKSYVT 224          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_CAEEL (Eukaryotic translation initiation factor 3 subunit I OS=Caenorhabditis elegans GN=eif-3.I PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.987e-33
Identity = 78/234 (33.33%), Postives = 119/234 (50.85%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESD-----KETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795
            MRP+ +KGHER LT +++N++GDL FSCAKD  P VW+ +NGER+G+Y GHNGAVW  DVS D+   +T S D T K+W+ E G  L+T N  +P +S  F+    L   TT    +  S   V+ +        G               A++  ++  +    E  +++ +D      LR  D      E+ H+ ++  L  +  G   ++ S DK+A L D   L+ +  Y
Sbjct:    1 MRPLSLKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDVSWDTTKCVTASGDLTVKIWDAELGNCLYTINHQTPMKSCGFSYSGNLVCFTTQKMTKNLSTFQVRDLRDSSQMVEGGESFFYSQFDVNATTALFTQMDDLVTIGFESGLLQQYD------LRNPDTPIHTNESVHRYSVQDLQLSPRGDFLISASRDKTAALLDVNDLKKLKQY 228          
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: EIF3I_YEAST (Eukaryotic translation initiation factor 3 subunit I OS=Saccharomyces cerevisiae GN=TIF34 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.860e-31
Identity = 82/239 (34.31%), Postives = 128/239 (53.56%), Query Frame = 1
Query:  109 MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQ-----SGESVLILKGPQGRIDRAV---WGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTYVT 801
            M+ I + GHERPLT +KYNK+GDLLFSC+KD + +VW++ NGERLGT  GH G +W  DV   +   +TGSAD + KLW+V  G  + T+    P + V+F+      +   D  M+   +I++  I  D A       S E +  +   +G +D A    W    + II+  +D  +  +D          D    H+K+I+ +  + D ++F+T S D ++ L D  TL+++  Y T
Sbjct:    1 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEG-LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNN--YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET 236          
The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
EIF3I_CANGA1.920e-3634.73Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_DEBHA2.508e-3637.82Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASPNC3.275e-3636.25Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CANAL6.177e-3537.24Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_ASHGO1.376e-3436.55Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_KLULA6.829e-3434.31Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CAEBR6.829e-3433.76Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_PHANO1.987e-3339.22Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_CAEEL1.987e-3333.33Eukaryotic translation initiation factor 3 subunit... [more]
EIF3I_YEAST1.860e-3134.31Eukaryotic translation initiation factor 3 subunit... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04N24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bp
CTCCCACTAGCTCTATCTTTGCGGTCTCAAGGCTTTCCAACGCTCCACCG
GAAACTCCATTCGTCGCGGAATTCAGCAAAACAGAGAAAGAAGAAGAAAA
AAGCAAGCATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACA
TATCTTAAATACAACAAAGACGGAGATCTGCTCTTTTCATGTGCCAAGGA
TCACACACCCACCGTTTGGTTCGCTGACAATGGCGAGCGTCTTGGCACCT
ACCGCGGCCACAACGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCG
ATGACGCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGT
TGAAACAGGGGCTCAGTTGTTCACATTCAATTTTGATTCTCCTGCTAGGT
CTGTCGACTTTGCTGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCT
TTCATGGAATTAAACTCAGCCATTCATGTCAAACGCATTGCAGGAGATCC
TGCTGATCAGAGTGGTGAATCTGTGCTTATTCTAAAAGGCCCTCAGGGAA
GAATAGACAGAGCAGTTTGGGGACCTCTAAACAGGACTATCATTAGTGCT
GGAGAAGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCT
TAGAGAGTCGGACAAGGAAACTGGTCATAAAAAGACTATAACATCGCTTG
CAAAAGCTGCTGATGGATCACATTTCCTCACTGGTTCCCTTGATAAATCT
GCTAAGCTGTGGGATGCCAGAACACTGGAGCTTATCACGACCTATGTGAC
GG
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