CF834079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: SNR40_MOUSE (U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus GN=Snrnp40 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.294e-16 Identity = 60/217 (27.65%), Postives = 92/217 (42.40%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLI-TGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDAR 771 +KGH + L YN DG +LFS + D T VW ++ GER+ +GH V C +R L+ TGS D T KLW++ A + TF +V F D +DQ IIS G D +++WD KL + GH ++T L+ +++GS+ L+ ++D + ++WD R Sbjct: 106 LKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKAAVQTFQNTYQVLAVTF---------------------------NDTSDQ--------------------------IISGGIDNDIKVWDLRQNKL---TYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WDR69_DANRE (WD repeat-containing protein 69 OS=Danio rerio GN=wdr69 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 63/224 (28.12%), Postives = 95/224 (42.41%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRD-SMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITT 792 ++ H PLT + +NK G + + D T +W +GE L T GH V+ + + TGS D+T KLW+ ETG +TF A V A + ++ T V +SGE V L G I + +++ D +WD +G R+ +GH+ I+ + D S T SLDKS K+WDA + + T Sbjct: 88 LQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGEELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFR-GHTAEIVCLAFNPQSTLVATGSMDTTAKLWDV---------ESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSG---RKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLAT 298 HSP 2 Score: 79.7221 bits (195), Expect = 2.066e-14 Identity = 67/257 (26.07%), Postives = 107/257 (41.63%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKD-GDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTE----------------------TGKLLRESDKE-----------------TGHKKTITSLAKAADGSHFLTGSLDKSAKLWDART 774 ++GH + + +N GD + + + D T +W A+ G+ T+RGH + C + S + TGS D TAKLW+VE+G ++ T + FA L TT + S H + P SG V +L G +G I + I +A D ++WD E TG+L+ + + GHK I+ + A GS LT S+DK++++W +T Sbjct: 130 LEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTL-------AGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVP---SGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKT 376 HSP 3 Score: 79.337 bits (194), Expect = 2.698e-14 Identity = 54/215 (25.12%), Postives = 93/215 (43.26%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFA-VGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLW 762 + GH + L +N GD L + + DHT +W +G ++ GH G + C + D + T S D++ K+W+ E G L T + V F G +A + D + S + + + L+G +G I + + +++A D R+W +TG L+ + GH I S A +G +TGS D + ++W Sbjct: 215 LAGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFST------------DTFQCLCQLEGHKGEISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLE---GHSDEIFSCAFNYEGDTIITGSKDNTCRIW 414
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 56/222 (25.23%), Postives = 107/222 (48.20%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELI 786 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P + + P + I++A D +++WD GK L+ K I + G ++GS D +W+ +T E++ Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 56/222 (25.23%), Postives = 107/222 (48.20%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELI 786 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P + + P + I++A D +++WD GK L+ K I + G ++GS D +W+ +T E++ Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 56/222 (25.23%), Postives = 107/222 (48.20%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELI 786 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P + + P + I++A D +++WD GK L+ K I + G ++GS D +W+ +T E++ Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 56/222 (25.23%), Postives = 107/222 (48.20%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELI 786 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P + + P + I++A D +++WD GK L+ K I + G ++GS D +W+ +T E++ Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 294
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.421e-16 Identity = 58/216 (26.85%), Postives = 97/216 (44.91%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSP-ARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765 ++GH + + ++ DG + S + DHT +W A +G T GH +VW S D + +GS D T K+W+ +G T SV F+ G ++A + D +++ A SG L+G G + + P + + S D ++IWDT +G + + GH + S+A + DG +GS D + K+WD Sbjct: 1047 LEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAA------------SGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLE---GHGGWVQSVAFSPDGQRVASGSSDNTIKIWD 1247 HSP 2 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 57/216 (26.39%), Postives = 99/216 (45.83%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWD 765 ++GH + + ++ DG + S + D T +W +G T GH G+VW S D + +GS D+T K+W+ +G T +SV F+ G ++A + D +++ A SG L+G + + P + + S D ++IWDT +G + + GH ++ S+A + DG +GS DK+ K+WD Sbjct: 837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDA------------ASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLE---GHGGSVWSVAFSPDGQRVASGSDDKTIKIWD 1037 HSP 3 Score: 82.4185 bits (202), Expect = 3.187e-15 Identity = 56/217 (25.81%), Postives = 99/217 (45.62%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTF-NFDSPARSVDFAV-GDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDA 768 ++GH + + ++ DG + S + D T +W +G T GH G+VW S D + +GS D+T K+W+ +G T +SV F+ G ++A + D +++ A+ SG L+G + + P + + S D ++IWD +G + + GH + S+A + DG +GS+D + K+WDA Sbjct: 963 LEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAV------------SGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLE---GHGGWVHSVAFSPDGQRVASGSIDGTIKIWDA 1164
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: STRAP_CHICK (Serine-threonine kinase receptor-associated protein OS=Gallus gallus GN=STRAP PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.387e-16 Identity = 63/230 (27.39%), Postives = 104/230 (45.22%), Query Frame = 1 Query: 115 PILMKGHERPLTYLKYN---KDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795 P+ GH RP+ L ++ G L S KD P + D G+ +GT+ GH GAVW +++D+ T +AD TAK+W+ +G +L T +SVDF + T +L + + +P ++ G I +A+W ++ I+SA +D VR+WD T K +++S+ +G L + K+ A TLE I ++ Sbjct: 7 PLTCSGHTRPVVDLAFSGVTPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELITLAHKHIVKSVDFTQDSN--YLLTGGQDKLLRIYDLSKPEAEPD--------VVSGHTSGIKKALWSSDDKQILSA-DDKTVRLWDRST----MTEVKALNVAMSVSSMEYVPEG-QILVITYGKTIAFHSAETLEQIKSF 220
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.095e-15 Identity = 56/222 (25.23%), Postives = 107/222 (48.20%), Query Frame = 1 Query: 124 MKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELI 786 + GH+ ++ + ++ D +LL S + D T +W +G+ L T +GH+ V+CC+ + S +++GS D++ ++W+V+TG L T S P +V F L V +S + RI + Q ++++ P + + P + I++A D +++WD GK L+ K I + G ++GS D +W+ +T E++ Sbjct: 83 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIV--------SSSYDGLCRIWDTASGQCLKTLIDDDNPP--VSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEVV 294
BLAST of CF834079 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.187e-15 Identity = 57/220 (25.91%), Postives = 102/220 (46.36%), Query Frame = 1 Query: 130 GHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQLFTFNFDS-PARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELI 786 GH ++ + ++ D L S + D T +W +G+ L T +GH+ V+CC+ + S +I+GS D+T K+W V+TG L T + S P +V F L V S + RI + Q ++++ P + + P + I++A D +++WD G+ L+ K I + G ++GS D +W+ +T E++ Sbjct: 81 GHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIV--------SGSYDGLCRIWDAASGQCLKTLVDDDNPP--VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 290 HSP 2 Score: 73.559 bits (179), Expect = 1.480e-12 Identity = 58/232 (25.00%), Postives = 99/232 (42.67%), Query Frame = 1 Query: 130 GHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDVSRDSMTLITGSADQTAKLWNVETGAQL----------FTFNFDSPARSVDFAVGDKLAVITTDPFMELNSAIHVKRIAGDPADQSGESVLILKGPQGRIDRAVWGPLNRTIISAGEDAIVRIWDTETGKLLRESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELITTY 795 GH ++ +K++ +G+ L S + D +W A +G+ T GHN + S DS L++ S D+T KLW+V +G L F NF+ P+ +I + F E VK +G+ + L + + I+S D + RIWD +G+ L+ + ++ + + +G + LT +LD + KLWD + TY Sbjct: 39 GHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSN-----------LIISGSFDETVKIWEVK---------TGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAASGQCLKTLVDD--DNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTY 248 The following BLAST results are available for this feature:
BLAST of CF834079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834079 ID=CF834079; Name=CF834079; organism=Citrus sinensis; type=EST; length=802bpback to top |