CF834081

Overview
NameCF834081
Unique NameCF834081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:73..806. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI_PUELO (Chalcone--flavonone isomerase OS=Pueraria lobata GN=CHI PE=1 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.629e-61
Identity = 118/211 (55.92%), Postives = 159/211 (75.36%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            +++ +QVE + F   V  P S +++FLGGAGERGL IEGKF+KFT IGVYLED AV  LA KWKGK +EEL E+++F+RD+++GPFEK ++ + ILPL+G +YS+KV ENC+A  K  G Y DAEA AIEKF E FK+  F PG+++ + QSP G L +SFS+D +IP +  AVIE+  +S AVLE+MIG++ VSP  K+SLA RL A+L+
Sbjct:    9 TISAVQVEFLEFPAVVTSPASGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAAKWKGKPSEELVETLDFYRDIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFQPGATVFYRQSPDGVLGLSFSEDVTIPDNEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 219          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI3_LOTJA (Chalcone--flavonone isomerase 3 OS=Lotus japonicus GN=CHI3 PE=2 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.254e-60
Identity = 116/214 (54.21%), Postives = 156/214 (72.90%), Query Frame = 3
Query:    3 VSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            V   +T +QVEN+ F  S+  P + KS+FLGGAGERGL IEGKF+KFT +GVYLED  V  LA KWKGK+++EL +S++F+RD+++ P EK ++ + + PL+G +YS KV ENC+A  K  G Y +AEA AI KF E F++  FPPGSS+ + QSP G L +SFS D ++P+    VIE+  LSEAVLE+MIG++ VSP  K+ LAERL A+LN
Sbjct:    4 VKGPLTPIQVENLQFPASITSPATAKSYFLGGAGERGLTIEGKFIKFTGLGVYLEDKTVDSLATKWKGKSSQELLDSLDFYRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSTGTYGEAEAAAIGKFAEAFRNLDFPPGSSVFYRQSPDGELGLSFSPDDTLPEKEAVVIENKALSEAVLETMIGEHAVSPDLKRCLAERLPAVLN 217          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI1_MEDSA (Chalcone--flavonone isomerase 1 OS=Medicago sativa GN=CHI1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.254e-60
Identity = 119/214 (55.61%), Postives = 158/214 (73.83%), Query Frame = 3
Query:    3 VSPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            ++ S+T + VEN+ +   V  P + KS+FLGGAGERGL IEG F+KFTAIGVYLED AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF E FK   FPPG+S+ + QSP G L +SFS D SIP+   A+IE+  +S AVLE+MIG++ VSP  K+ LA RL ALLN
Sbjct:    1 MAASITAITVENLEYPAVVTSPVTGKSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 214          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CF1B1_SOYBN (Chalcone--flavonone isomerase 1B-1 OS=Glycine max GN=CHI1B1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.174e-58
Identity = 116/205 (56.59%), Postives = 152/205 (74.15%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAER 623
            S+T + VE + F   V PPGSTKS+FLGGAG RGL I+ +FVKFT IGVYLED AV  LA KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPPGS++ + QSP G+L +SFSKD +IP+   AVI++  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:    6 SITNVTVEFLQFPALVTPPGSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 210          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CF1B2_SOYBN (Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.298e-57
Identity = 114/205 (55.61%), Postives = 151/205 (73.66%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAER 623
            S+T + VE + F   V PP STKS+FLGGAG RGL I+ +FVKFT IGVYLED AV  L  KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y++AE KAIE+F   FKD+ FPPGS++ + QSP G+L +SFSKD +IP+   AVI++  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:    6 SITNVTVEFLQFPALVTPPASTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLGAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMESVGTYSEAEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGLSFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 210          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI2_MEDSA (Chalcone--flavonone isomerase 2 (Fragment) OS=Medicago sativa GN=CHI2 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.440e-57
Identity = 112/189 (59.26%), Postives = 144/189 (76.19%), Query Frame = 3
Query:   78 KSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            KS+FLGGAGERGL IEG F+KFTAIGVYLED AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF E FK   FPPG+S+ + QSP G L +SFS D SIP+   A+IE+  +S AVLE+MIG++ VSP  K+ LA RL ALLN
Sbjct:    1 KSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 189          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI2B_SOYBN (Chalcone--flavonone isomerase 2-B OS=Glycine max GN=CHI2-B PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.098e-56
Identity = 115/206 (55.83%), Postives = 151/206 (73.30%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSL-TISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAER 623
            S+T + VE + F   V PPGSTKS+FLGGAG RGL I+ +FVKFT IGVYLED AV  LA KWKGK+A EL +S++F+RD++ GPFEK ++ + +  L G +Y  KV+ENC+A  +  G Y+D E KAIE+F   FKD+ FPPGS++ + QSP G+L  + FSKD +IP+   AVI++  LSEAVLE+MIG+  VSPA K+SLA R
Sbjct:    6 SITNVTVEFLQFPALVTPPGSTKSYFLGGAGVRGLNIQEEFVKFTGIGVYLEDKAVSSLAAKWKGKSAAELLDSLDFYRDIIKGPFEKLIRGSKLRTLDGREYVRKVSENCVAHMQSVGTYSDEEEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTLGQLIFSKDETIPEHEHAVIDNKPLSEAVLETMIGEIPVSPALKESLATR 211          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI1_SOYBN (Chalcone--flavonone isomerase 1 (Fragment) OS=Glycine max GN=CHI1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.724e-46
Identity = 94/163 (57.67%), Postives = 120/163 (73.62%), Query Frame = 3
Query:  141 FTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERL 626
            +T IGVYLED AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF E FK+  F PG   L+ QSP G L +SFS+D +IP+   AVIE+  +S AVLE+MIG++ VSP  K+ LA RL
Sbjct:    1 YTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGPLFLYRQSPDGILGLSFSEDVTIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRILASRL 163          
BLAST of CF834081 vs. ExPASy Swiss-Prot
Match: CFI_PEA (Chalcone--flavonone isomerase OS=Pisum sativum GN=CHI PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.912e-43
Identity = 102/199 (51.26%), Postives = 133/199 (66.83%), Query Frame = 3
Query:   51 PSVQPPGSTKSH-FLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            P+V     T++H FLGGAGERGL I G F+KFT IGVYLED A   LA KW+GK  EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAE +AI+   ++ +  IF         QSP G L +S SKD SIP+   A+IE+   S AVLE+MIG++ VSP  K+ LA RL ALLN
Sbjct:   18 PAVVTSPVTENHIFLGGAGERGLTINGTFIKFTCIGVYLEDKADKSLATKWEGKL-EELLETLDFYRDIISGPFEKLIRRSKIKELSGPEYSRKVMENCVAHLKSVGTYGDAEVEAIQNLQKLSRMLIFHLVLLKKNRQSPDGILGLSSSKDISIPEKEDAIIENKAASSAVLETMIGEHAVSPDLKRCLAARLPALLN 215          
The following BLAST results are available for this feature:
BLAST of CF834081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_PUELO5.629e-6155.92Chalcone--flavonone isomerase OS=Pueraria lobata G... [more]
CFI3_LOTJA1.254e-6054.21Chalcone--flavonone isomerase 3 OS=Lotus japonicus... [more]
CFI1_MEDSA1.254e-6055.61Chalcone--flavonone isomerase 1 OS=Medicago sativa... [more]
CF1B1_SOYBN1.174e-5856.59Chalcone--flavonone isomerase 1B-1 OS=Glycine max ... [more]
CF1B2_SOYBN1.298e-5755.61Chalcone--flavonone isomerase 1B-2 OS=Glycine max ... [more]
CFI2_MEDSA6.440e-5759.26Chalcone--flavonone isomerase 2 (Fragment) OS=Medi... [more]
CFI2B_SOYBN1.098e-5655.83Chalcone--flavonone isomerase 2-B OS=Glycine max G... [more]
CFI1_SOYBN8.724e-4657.67Chalcone--flavonone isomerase 1 (Fragment) OS=Glyc... [more]
CFI_PEA6.912e-4351.26Chalcone--flavonone isomerase OS=Pisum sativum GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_04O02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04O02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834081 ID=CF834081; Name=CF834081; organism=Citrus sinensis; type=EST; length=734bp
ACGTCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCACTTTCACG
CCGTCCGTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCGGCGGCGC
AGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTCACGGCGA
TAGGAGTGTACTTGGAGGATGACGCCGTGCCGTTACTCGCCGGCAAATGG
AAGGGGAAGACTGCAGAGGAGTTGACGGAATCCGTTGAGTTCTTCAGAGA
CGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATGATCTTGC
CATTAACTGGCGCACAATACTCAGAGAAGGTTGCCGAAAATTGCATTGCC
ATATGGAAATTTTTTGGAATTTACACTGATGCTGAAGCCAAAGCTATTGA
AAAATTCACTGAGGTCTTCAAGGATGAAATTTTCCCACCAGGATCCTCAA
TTCTCTTTACTCAATCACCAGGATCATTGACTATCAGCTTCTCCAAAGAC
GGTTCAATACCGAAAGATGGTGTTGCGGTAATAGAGAGTAATCTGCTTTC
TGAGGCAGTACTGGAGTCGATGATCGGCAAGAATGGTGTTTCTCCTGCAG
CAAAGAAGAGTTTGGCTGAAAGACTATCAGCACTGTTGAATGTAACTAGT
GATAAGATGAAATGAAGAAGTTGAAAAGTTTGCCAAATAATAAGCGAAGG
CAGAGTTGTTAAATTGGCAAACTTTTTTTTCTTT
back to top