CF834082

Overview
NameCF834082
Unique NameCF834082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length588
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1058 contig Csv1_Contig1058:1..588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.676e-13
Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+LH++ DE   +LLKNCY ALP+ GK++ +   + E    +A  + +  +D I+L   P G+ER ++E+ ELA  AGF G        N + +EF K
Sbjct:  271 WILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.859e-13
Identity = 37/98 (37.76%), Postives = 57/98 (58.16%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+ H++ D+  +KLLKNCY+ALP  GK++ +   + E P  SAA++     D I+L   P G+ERT++++  LA    F      C   + +VMEF K
Sbjct:  262 WICHDWSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.877e-13
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+LH++DD++++K+LKNC+KALP+ G ++ I   + +V  N+A S      D +++   P G+ERT  E++ LA  AGF    +      L+VMEF K
Sbjct:  281 WVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.392e-12
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+LH++ D     LLKNCY ALP+ GK++ +   +    + +  ++ +  +D I+L   P G+ER ++E+ ELA  AGF G        N + +EF+K
Sbjct:  267 WILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.198e-12
Identity = 34/98 (34.69%), Postives = 56/98 (57.14%), Query Frame = -3
Query:  179 WMLHNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCNLYVMEFLK 472
            W+LH++ D     LLKNCY ALP+ GK++ +   +    +    ++ +  +D I+L   P GRER ++E+++LA  AGF G        N + +EF+K
Sbjct:  265 WILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF834082 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.198e-12
Identity = 37/96 (38.54%), Postives = 57/96 (59.38%), Query Frame = -3
Query:  179 HNFDDEQTLKLLKNCYKALPDGGKLLNINSTISEVPQNSAASREISILDTILLIQIPHGRERTKQEYNELAIKAGFKGVSYECGVCN-LYVMEFLK 463
            HN+ DE+ ++ L NC+KAL   GK++ +   + E P  S  S+ +S LD ++ I +  GRERT+++Y +L+  +GF      C   N L VMEF K
Sbjct:  278 HNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372          
The following BLAST results are available for this feature:
BLAST of CF834082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
OMT1_ORYSJ1.676e-1337.76Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_CAPCH2.859e-1337.76Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
SMT_COPJA4.877e-1338.78(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
COMT1_MAIZE5.392e-1234.69Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF9.198e-1234.69Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
CHOMT_MEDSA9.198e-1238.54Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04O03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834082 ID=CF834082; Name=CF834082; organism=Citrus sinensis; type=EST; length=588bp
TTTTTTTTTTTTTTACGGGAATCAATCTCCCTATAAGAGATTTATCATTG
ATAAAACGAAAGAGATTACATAAGAGAAGCCCTCAATCCAAAGGAAAGAG
ATAACAAGACAAACCGGAAATTGAAAACAACCCAAGAAAGCTAAGGAGAT
CTTTCCGAATAGAGAAAAAAGCAATCTATTTCAAGAACTCCATAACATAT
AAATTACATACACCACATTCGTAGCTGACACCTTTAAATCCAGCTTTAAT
TGCCAATTCATTGTATTCTTGTTTGGTGCGCTCTCTTCCATGAGGAATTT
GGATCAACAAAATTGTATCCAAAATAGAGATTTCCCTTGAAGCCGCACTA
TTTTGAGGCACTTCTGAAATTGTTGAATTAATATTGAGCAGCTTCCCACC
ATCTGGAAGAGCTTTGTAACAATTCTTCAACAATTTCAAAGTTTGCTCAT
CATCAAAATTGTGAAGCATCCAACTTTTTCCGGTATACTATTTTTGAGTT
TTATTGTTTTTTTTTCGATTTTCATAATATCTTGTTATCCTTTTGAGTTT
TTCAATGAAAAAATTGACGTCAAATGAGTAAATTGTCC
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