CF834085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB25_HUMAN (Ras-related protein Rab-25 OS=Homo sapiens GN=RAB25 PE=1 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 7.958e-59 Identity = 110/174 (63.22%), Postives = 141/174 (81.03%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKSDL+ R V E+ AE GL FLETSAL++TNVE AF+T+L EI+ Sbjct: 1 MGNGTEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF 174
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.315e-58 Identity = 110/174 (63.22%), Postives = 141/174 (81.03%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 M + + +Y+++FK+VLIG+SGVGK+N+LSRFTRNEF +S++TIGVEF+TRT+ + VKAQIWDTAG ERYRAITSAYYRGAVGALLV+D+TK QT+ V RWL+EL DHA++ IV+M+ GNKSDL+ R V E+ AE GL FLETSAL++TNVE AF+T+L EI+ Sbjct: 1 MGNGKEEDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIF 174
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 6.737e-58 Identity = 107/165 (64.85%), Postives = 137/165 (83.03%), Query Frame = 2 Query: 224 DYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 +YLFKIV+IGDS VGKSN+L+R+ RNEF SK+TIGVEF T+++ ++GK VKAQIWDTAGQER+RA+TSAYYRGAVGAL+VYDIT+ TF+NV RWL EL H+D+ + M+ GNK DL +RAV+ E+G SLAE EGL F+ETSAL++TNV+ AF+ ++ EIY Sbjct: 10 EYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIY 174
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 4.828e-56 Identity = 101/170 (59.41%), Postives = 137/170 (80.59%), Query Frame = 2 Query: 212 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIYH 721 + E +YLFKIV+IGDS VGKSN+L+RFTRNEF ++K+TIGV+F T++++++ KT+ AQ WDTAGQER+RA+TS YYRGAVGA++VYDIT + +F NV RWL ELR+ A+ +I+IMM GNKSDL R V ++ + AE +SFLETSAL +TNV ++F+ +LT+IYH Sbjct: 4 EEEAEYLFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYH 173
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 5.170e-50 Identity = 91/168 (54.17%), Postives = 128/168 (76.19%), Query Frame = 2 Query: 218 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIYH 721 EYDYL KIV+IGDSGVGKSN+LSR+ +NEF + STIGVEF+T+TL+++ K +K Q+WDTAGQE+Y +IT +YY+GA+GAL+VY+I R +F+N+ +WL++ R++A + IM+ GNKSDL R V+ +G AEK + F+ETSAL++ NVE AF + IY+ Sbjct: 7 EYDYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYY 174
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.837e-48 Identity = 94/166 (56.63%), Postives = 119/166 (71.69%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK DL H RAVT E+G A++ GL FLETSA A NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.837e-48 Identity = 94/166 (56.63%), Postives = 119/166 (71.69%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK DL H RAVT E+G A++ GL FLETSA A NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.839e-48 Identity = 90/165 (54.55%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++GK +K QIWDTAGQER+R IT+AYYRGA+G +LVYDIT ++FDN+ W+R + +HA S++ M+ GNK D+N R V++E G LA G+ FLETSA +TNVE+AF T+ +I Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.839e-48 Identity = 90/165 (54.55%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++GK +K QIWDTAGQER+R IT+AYYRGA+G +LVYDIT ++FDN+ W+R + +HA S++ M+ GNK D+N R V++E G LA G+ FLETSA +TNVE+AF T+ +I Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB8B_MOUSE (Ras-related protein Rab-8B OS=Mus musculus GN=Rab8b PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.839e-48 Identity = 90/165 (54.55%), Postives = 124/165 (75.15%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++GK +K QIWDTAGQER+R IT+AYYRGA+G +LVYDIT ++FDN+ W+R + +HA S++ M+ GNK D+N R V++E G LA G+ FLETSA +TNVE+AF T+ +I Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDI 169 The following BLAST results are available for this feature:
BLAST of CF834085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834085 ID=CF834085; Name=CF834085; organism=Citrus sinensis; type=EST; length=799bpback to top |