CF834085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RANT_MOUSE (GTP-binding nuclear protein Ran, testis-specific isoform OS=Mus musculus GN=Rasl2-9 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.622e-19 Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK+VL+GD G GK+ + R EF E +T+GVE T +K +WDTAGQE++ + YY A A++++D+T R T+ NV W ++L NI I++ GNK D+ ++ + K+ L + + SA N EK F Sbjct: 11 FKVVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDL-VRVCENIPIVLCGNKVDVKDMKVKAKP--ILFHRKKNLQYYDISARSNYNFEKPF 161
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB28_RAT (Ras-related protein Rab-28 OS=Rattus norvegicus GN=Rab28 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.622e-19 Identity = 56/177 (31.64%), Postives = 91/177 (51.41%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGK-TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRW---LRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 M+ + D KIV++GD GK+++ + F + F + K TIG++F R + + G V Q+WD GQ + Y GA G LLVYDIT Q+F+N+ W ++ + + +++ ++ + GNK DL H+R V + ++ G S SA +V FQ + EI Sbjct: 1 MSDSEEESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHMRTVKPDKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEI 177
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB28_MOUSE (Ras-related protein Rab-28 OS=Mus musculus GN=Rab28 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.622e-19 Identity = 56/177 (31.64%), Postives = 91/177 (51.41%), Query Frame = 2 Query: 197 MASRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGK-TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRW---LRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 M+ + D KIV++GD GK+++ + F + F + K TIG++F R + + G V Q+WD GQ + Y GA G LLVYDIT Q+F+N+ W ++ + + +++ ++ + GNK DL H+R V + ++ G S SA +V FQ + EI Sbjct: 1 MSDSEEESQDRQLKIVVLGDGTSGKTSLATCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQVWDIGGQTIGGKMLDKYIYGAQGILLVYDITNYQSFENLEDWYSVVKTVSEESETQPLVALVGNKIDLEHMRTVKADKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEI 177
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RASX_DICDI (Ras-like protein rasX OS=Dictyostelium discoideum GN=rasX PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.119e-19 Identity = 56/156 (35.90%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 230 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIV-IMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 L K+ ++GD GVGK+ + +F N F TI + + + ++ + I DTAGQ+ A+ + R G +LVY +T R +FD + + ++ DS+ V IMM GNKSDL+ R VT ++G LA G+SF+E SA +N+E+ F Sbjct: 9 LVKLCIMGDGGVGKTAVTIQFISNHFVHYYDPTIEDSYRKQCV-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSVTSRSSFDQIAFFKEQINRVLDSDDVPIMMIGNKSDLDDERQVTYQEGKDLARCFGMSFMEVSAKTRSNIEEVF 163
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RASY_DICDI (Ras-like protein rasY OS=Dictyostelium discoideum GN=rasY PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.767e-19 Identity = 59/157 (37.58%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 230 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRE--LRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 L K+ ++GD GVGK+++ +F N F TI + + L ++ + I DTAGQ+ A+ + R G +LVY +T R +FD V ++ RE +R ++ IMM GNKSDL+ R VT ++G LA G+SF+E SA NVE+ F Sbjct: 10 LVKLCIMGDGGVGKTSVTIQFISNHFVHYYDPTIEDSYRKQCL-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQV-QFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTFQEGKDLARCLGMSFMEVSAKTRLNVEEVF 164
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RB32D_DICDI (Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.614e-19 Identity = 54/167 (32.34%), Postives = 95/167 (56.89%), Query Frame = 2 Query: 236 KIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELR------DHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLS-FLETSALEATNVEKAFQTILTEI 715 K++LIGD VGK++IL R ++F E KSTIG +F ++T Q+WDTAGQE+Y +TSA++R + +LV+DI+ +F N+ W ++ + D + + I++ NKSD + RAV + + + ++ + E SA + N++++ ++ I Sbjct: 11 KLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQLWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQLPILLLANKSD-SLTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVI 176
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.614e-19 Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRE-LRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 +K+V++G GVGKS + +F ++ F E TI + + + ++ + + DTAGQE Y A+ Y R G LLVY IT R +F+ + + ++ LR +++ NK DL + R V +G LA G F+ETSA NV++AFQ ++ EI Sbjct: 11 YKLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCV-IDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVVVANKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDLVREI 171
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN_TETPY (GTP-binding nuclear protein Ran OS=Tetrahymena pyriformis PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.614e-19 Identity = 55/171 (32.16%), Postives = 90/171 (52.63%), Query Frame = 2 Query: 209 VDHEYDYL--FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 VD++ D + FK+VL+GD GVGK+ ++R EF +T GV + L ++ IWDTAGQE+ + YY GA A++++D+T R T+ N+ +W ++L + N+ I++ GNK D + + + K L + + SA EK F IL ++ Sbjct: 2 VDNKQDVVAEFKLVLVGDGGVGKTTFVTRHQTGEFEKRYIATQGVNVSNMILHTTKGAIRFNIWDTAGQEKLGGLREGYYIGADAAIMMFDVTSRITYKNIPKWHKDLTRICE-NVPIVLVGNKVDSKDSKVKARQ--ITFHRKRSLQYYDVSAKSNYQYEKPFLWILRKL 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAS_SCHPO (Ras-like protein 1 OS=Schizosaccharomyces pombe GN=ras1 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.720e-19 Identity = 55/162 (33.95%), Postives = 89/162 (54.94%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRE-LRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 +K+V++GD GVGKS + + ++ F E TI + + +++G+ + DTAGQE Y A+ Y R G LLVY+IT R +FD + + ++ LR +++ NK DL R V+ +G LA+ ++ETSA NVE+AF +++ I Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKC-EIDGEGALLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN4_ARATH (GTP-binding nuclear protein Ran-4 OS=Arabidopsis thaliana GN=RAN4 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.720e-19 Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK++++GD G GK+ L R EF ++ T+GV+ ++ + WDTAGQE+Y + AYY A++++D+T R T+ N+ RW R+LR NI I++ GNK D+ + + S K+ L + E SA N EK F Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLR-RVCKNIPIVLCGNKVDVPSRQIKPKH--VSYHRKKCLQYYEMSAKNNCNFEKPF 164 The following BLAST results are available for this feature:
BLAST of CF834085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834085 ID=CF834085; Name=CF834085; organism=Citrus sinensis; type=EST; length=799bpback to top |