CF834085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN_PONAB (GTP-binding nuclear protein Ran OS=Pongo abelii GN=RAN PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK+VL+GD G GK+ + R EF + +T+GVE +K +WDTAGQE++ + YY A A++++D+T R T+ NV W R+L NI I++ GNK D+ + + K+ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN_MOUSE (GTP-binding nuclear protein Ran OS=Mus musculus GN=Ran PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK+VL+GD G GK+ + R EF + +T+GVE +K +WDTAGQE++ + YY A A++++D+T R T+ NV W R+L NI I++ GNK D+ + + K+ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN_MACFA (GTP-binding nuclear protein Ran OS=Macaca fascicularis GN=RAN PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK+VL+GD G GK+ + R EF + +T+GVE +K +WDTAGQE++ + YY A A++++D+T R T+ NV W R+L NI I++ GNK D+ + + K+ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN_HUMAN (GTP-binding nuclear protein Ran OS=Homo sapiens GN=RAN PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK+VL+GD G GK+ + R EF + +T+GVE +K +WDTAGQE++ + YY A A++++D+T R T+ NV W R+L NI I++ GNK D+ + + K+ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN_CHICK (GTP-binding nuclear protein Ran OS=Gallus gallus GN=RAN PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK+VL+GD G GK+ + R EF + +T+GVE +K +WDTAGQE++ + YY A A++++D+T R T+ NV W R+L NI I++ GNK D+ + + K+ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN_CANFA (GTP-binding nuclear protein Ran OS=Canis familiaris GN=RAN PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK+VL+GD G GK+ + R EF + +T+GVE +K +WDTAGQE++ + YY A A++++D+T R T+ NV W R+L NI I++ GNK D+ + + K+ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAN_BOVIN (GTP-binding nuclear protein Ran OS=Bos taurus GN=RAN PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 52/154 (33.77%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAF 694 FK+VL+GD G GK+ + R EF + +T+GVE +K +WDTAGQE++ + YY A A++++D+T R T+ NV W R+L NI I++ GNK D+ + + K+ L + + SA N EK F Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.343e-18 Identity = 48/150 (32.00%), Postives = 80/150 (53.33%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIG-VEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATN 679 +KI LIGD GVGK+ ++R F +T+G V L +G +K +WDTAGQE+ + YY GA GA+ +D+T R T N+ RW++E + + I++ NK D+ + + ++++ + + + + E SA A N Sbjct: 8 YKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHN 157
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RASK_MSVKI (GTPase KRas OS=Kirsten murine sarcoma virus GN=K-RAS PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 56/162 (34.57%), Postives = 89/162 (54.94%), Query Frame = 2 Query: 233 FKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADS-NIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 +K+V++G SGVGKS + + +N F E TI + + + ++G+T I DT GQE Y A+ Y R G L V+ I ++F+++ + +L+ DS ++ +++ GNK DL R V + LA G+ F+ETSA VE AF T++ EI Sbjct: 4 YKLVVVGASGVGKSALTIQLIQNHFVDEYDPTIQDSYRKQVV-IDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQLKRVKDSEDVPMVLVGNKCDLPS-RTVDTKQAQELARSYGIPFIETSAKTRQRVEDAFYTLVREI 163
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RALA_DROME (Ras-related protein Ral-a OS=Drosophila melanogaster GN=Rala PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 3.059e-18 Identity = 55/163 (33.74%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 230 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRE-LRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 L K++++G GVGKS + +F +EF + + T + + + ++G+ V+ I DTAGQE Y AI Y+R G L V+ IT ++F + + LR D +I ++ GNK DLN R V + A++ + ++ETSA NV+K F ++ EI Sbjct: 11 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEEVQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRVKNDESIPFLLVGNKCDLNDKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREI 172 The following BLAST results are available for this feature:
BLAST of CF834085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834085 ID=CF834085; Name=CF834085; organism=Citrus sinensis; type=EST; length=799bpback to top |