CF834085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 189.889 bits (481), Expect = 1.408e-47 Identity = 93/166 (56.02%), Postives = 125/166 (75.30%), Query Frame = 2 Query: 218 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++ +GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL E+ +A N+ ++ GNK DL R V+ E G +LA++ G+ FLETSA +ATNVEKAF T+ EI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 189.504 bits (480), Expect = 1.839e-47 Identity = 89/165 (53.94%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 YDYLFK++LIGDSGVGK+ +L RF+ + F STIG++F RT++++GK +K QIWDTAGQER+R IT+AYYRGA+G +LVYDIT ++FDN+ W+R + +HA S++ M+ GNK D+N R V++E G LA G+ FLETSA + NVE+AF T+ +I Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB2A_RABIT (Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R TF+++ WL + R H++SN+VIM+ GNKSDL R V +E+G + A + GL F+ETSA A+NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB2A_PONAB (Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R TF+++ WL + R H++SN+VIM+ GNKSDL R V +E+G + A + GL F+ETSA A+NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB2A_MOUSE (Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R TF+++ WL + R H++SN+VIM+ GNKSDL R V +E+G + A + GL F+ETSA A+NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB2A_MACFA (Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R TF+++ WL + R H++SN+VIM+ GNKSDL R V +E+G + A + GL F+ETSA A+NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB2A_HUMAN (Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R TF+++ WL + R H++SN+VIM+ GNKSDL R V +E+G + A + GL F+ETSA A+NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R TF+++ WL + R H++SN+VIM+ GNKSDL R V +E+G + A + GL F+ETSA A+NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.137e-47 Identity = 92/166 (55.42%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R TF+++ WL + R H++SN+VIM+ GNKSDL R V +E+G + A + GL F+ETSA A+NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIY 168
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 5.350e-47 Identity = 92/166 (55.42%), Postives = 119/166 (71.69%), Query Frame = 2 Query: 221 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEIY 718 Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GK +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R TF+++ WL + R H++SN+VIM+ GNKSDL R V +E+G + A + GL F+ETSA A NVE+AF EIY Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIY 168 The following BLAST results are available for this feature:
BLAST of CF834085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834085 ID=CF834085; Name=CF834085; organism=Citrus sinensis; type=EST; length=799bpback to top |