CF834085
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.936e-45 Identity = 88/166 (53.01%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 218 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T ++++ NV +WL+E+ +A N+ ++ GNKSDL + V A+ G+ FLETSA ATNVE+AF T+ EI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.936e-45 Identity = 88/166 (53.01%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 218 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T ++++ NV +WL+E+ +A N+ ++ GNKSDL + V A+ G+ FLETSA ATNVE+AF T+ EI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.936e-45 Identity = 88/166 (53.01%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 218 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T ++++ NV +WL+E+ +A N+ ++ GNKSDL + V A+ G+ FLETSA ATNVE+AF T+ EI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 88/166 (53.01%), Postives = 121/166 (72.89%), Query Frame = 2 Query: 218 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GK +K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL E+ +A N+ ++ GNKSDL + V + A++ G+ FLETSA ATNVE+AF T+ EI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 88/166 (53.01%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 218 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL+E+ +A N+ ++ GNK DL + V A+ G+ FLETSA ATNVE+AF T+ EI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 88/166 (53.01%), Postives = 120/166 (72.29%), Query Frame = 2 Query: 218 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T ++++ NV +WL+E+ +A N+ ++ GNKSDL + V A+ G+ FLETSA ATNVE+AF T+ EI Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 88/171 (51.46%), Postives = 123/171 (71.93%), Query Frame = 2 Query: 203 SRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 S ++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL+E+ +A N+ ++ GNK DL + V A+ G+ FLETSA ATNVE++F T+ EI Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 88/171 (51.46%), Postives = 123/171 (71.93%), Query Frame = 2 Query: 203 SRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 S ++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL+E+ +A N+ ++ GNK DL + V A+ G+ FLETSA ATNVE++F T+ EI Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 88/171 (51.46%), Postives = 123/171 (71.93%), Query Frame = 2 Query: 203 SRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 S ++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL+E+ +A N+ ++ GNK DL + V A+ G+ FLETSA ATNVE++F T+ EI Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CF834085 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 181.8 bits (460), Expect = 3.834e-45 Identity = 88/171 (51.46%), Postives = 123/171 (71.93%), Query Frame = 2 Query: 203 SRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRAVTEEDGHSLAEKEGLSFLETSALEATNVEKAFQTILTEI 715 S ++ EYDYLFK++LIGDSGVGKS +L RF + + STIGV+F RT++++GKT+K QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV +WL+E+ +A N+ ++ GNK DL + V A+ G+ FLETSA ATNVE++F T+ EI Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172 The following BLAST results are available for this feature:
BLAST of CF834085 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834085 ID=CF834085; Name=CF834085; organism=Citrus sinensis; type=EST; length=799bpback to top |