CF834086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_TRIAD (40S ribosomal protein S3a OS=Trichoplax adhaerens GN=TRIADDRAFT_36460 PE=3 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.442e-60 Identity = 115/182 (63.19%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 DWYD+KAPS F VRN+GKTLV RT GTKIAS+GLK RVFEVSL DL N E A+RK RL AE+V GK+VLTNF GMS T+DKL+SLV+KW TLIEA++D KTTD + LR F IGFTK+ PNQ+K+T YA+TSQ R IR+KM +I+ + ++ DLK +V + I + IG++IEK+ SIYPL + Sbjct: 28 DWYDVKAPSQFAVRNIGKTLVNRTSGTKIASDGLKGRVFEVSLADLQNGEI-AFRKFRLIAEEVLGKSVLTNFHGMSMTSDKLKSLVKKWQTLIEAHIDAKTTDGYLLRFFAIGFTKKRPNQIKKTAYAKTSQCRSIRKKMTDIITREVSAIDLKEVVNRLIPDSIGKDIEKSCQSIYPLHD 208
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A2_SCHPO (40S ribosomal protein S1-B OS=Schizosaccharomyces pombe GN=rps102 PE=1 SV=3) HSP 1 Score: 232.646 bits (592), Expect = 1.442e-60 Identity = 113/182 (62.09%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 +WYDIKAP+ F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEHA+RK++LR ED+QGK+ LT+F G+S T+DKLRSLVRKW T IEA +KTTD + R+F IGFT+R NQVK+T YAQ+SQIR IR+KM +++ Q +SC ++ LV+K I EVIGREIE+AT SI+PLQN Sbjct: 28 EWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHAFRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVIGFTRRRANQVKKTTYAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERATGSIFPLQN 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_PERAM (40S ribosomal protein S3a OS=Periplaneta americana GN=Parcxpwex01 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.213e-60 Identity = 115/184 (62.50%), Postives = 139/184 (75.54%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 DWYD+KAPS F R +GKTLV RTQGTKIASEGLK+RVFEVSL DL N+ E ++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW TLIEA VDVKTTD + LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ S DLK +V K + + I ++IEKA IYPL + Sbjct: 29 DWYDVKAPSMFATRQIGKTLVNRTQGTKIASEGLKYRVFEVSLADLQNDNDAERSFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQTLIEANVDVKTTDGYLLRVFCIGFTNKDQMSQRKTCYAQHTQVRAIRKKMVEIITRDVTSSDLKEVVNKLLPDSIAKDIEKACQGIYPLHD 212
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_NANOT (40S ribosomal protein S1 OS=Nannizzia otae (strain CBS 113480) GN=RPS1 PE=3 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.213e-60 Identity = 118/182 (64.84%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 D Y +KAP+ F+VR+VGKTLV RT G K A++ LK RVFEVSL DL +E H++RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ +RLF I FTKR PNQ+K+T YAQ+SQIR IR+KM EI+ QA+SC L L K + EVIGREIEK+T IYPLQN Sbjct: 28 DEYLVKAPTTFQVRDVGKTLVNRTTGLKNANDYLKGRVFEVSLADLQKDEAHSFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLVRLFAIAFTKRRPNQIKKTTYAQSSQIRAIRKKMTEIIQRQASSCTLTQLT-KLVPEVIGREIEKSTQGIYPLQN 208
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_SCHJY (40S ribosomal protein S1 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps1 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.196e-60 Identity = 113/182 (62.09%), Postives = 140/182 (76.92%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 DWYDIKAPS F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEH++RK++LR +DVQGK LT F GMS T+DKLRSLVRKW T IEA +KTTD + R+F IGFT+R NQ+K+T YAQ+SQIR IR+KM +++ QA C ++ LV+K I E+IGREIEKAT I+PLQN Sbjct: 28 DWYDIKAPSFFEVKNVGKTLVNRTAGLKNANDALKGRIVEVSLADLQKDEEHSFRKVKLRVDDVQGKACLTTFNGMSMTSDKLRSLVRKWQTTIEADQTIKTTDGYVCRIFVIGFTRRRYNQIKKTTYAQSSQIRAIRQKMFQVIQNQATGCSMRELVQKLIPEIIGREIEKATGGIFPLQN 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_AJECN (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=RPS1 PE=3 SV=1) HSP 1 Score: 231.106 bits (588), Expect = 4.196e-60 Identity = 118/182 (64.84%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 D Y +KAPS F VR+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A+S L L K I EVIGREIEK+T IYPLQN Sbjct: 28 DEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASSRTLAQLT-KLIPEVIGREIEKSTHGIYPLQN 208
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_AJEDS (40S ribosomal protein S1 OS=Ajellomyces dermatitidis (strain SLH14081) GN=RPS1 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.480e-60 Identity = 117/182 (64.29%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 D Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREIEKAT IYPLQN Sbjct: 28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKATHGIYPLQN 208
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_AJEDR (40S ribosomal protein S1 OS=Ajellomyces dermatitidis (strain ER-3) GN=RPS1 PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.480e-60 Identity = 117/182 (64.29%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 D Y +KAPS F +R+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREIEKAT IYPLQN Sbjct: 28 DEYSVKAPSTFAIRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKATHGIYPLQN 208
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A2_PICST (40S ribosomal protein S1-B OS=Pichia stipitis GN=RPS1B PE=3 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.480e-60 Identity = 111/182 (60.99%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 DW+DIKAPS F RNVGKTL+ R+ G K A++GLK RV EVSL DL E+H+YRKI+LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT+D++ LR+F I FTKR NQ+K+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T +I+PLQN Sbjct: 28 DWFDIKAPSTFENRNVGKTLINRSTGLKNAADGLKGRVVEVSLADLQGSEDHSYRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAIAFTKRQANQIKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQTIFPLQN 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_MALGO (40S ribosomal protein S1 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=RPS1 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.348e-60 Identity = 110/182 (60.44%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 +WYDIKAP F RNVGKT+V R+QG K AS+ LK R+ E SL DL ++E AYRK +LR ++VQG+N LTNF+GMSFT+DKLRSLVRKW +LIEA+ D++TTD + LR+F IGFT+R NQVK+T YA++SQI IR+KM E++ +++SCDL+ V K I EV+GREIEK+T IYPL++ Sbjct: 27 EWYDIKAPVFFENRNVGKTIVNRSQGLKNASDALKGRILEQSLADLNKDDEQAYRKFQLRVDEVQGRNCLTNFYGMSFTSDKLRSLVRKWQSLIEAHQDIRTTDGYLLRVFAIGFTRRRANQVKKTTYAKSSQIHAIRKKMFEVIQRESSSCDLREFVAKLIPEVMGREIEKSTQGIYPLKD 208 The following BLAST results are available for this feature:
BLAST of CF834086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834086 ID=CF834086; Name=CF834086; organism=Citrus sinensis; type=EST; length=682bpback to top |