CF834086
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_AJECG (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=RPS1 PE=3 SV=1) HSP 1 Score: 229.95 bits (585), Expect = 9.348e-60 Identity = 117/182 (64.29%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 D Y +KAPS F VR+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREIEK+T IYPLQN Sbjct: 28 DEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIEKSTHGIYPLQN 208
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_AJECH (40S ribosomal protein S1 OS=Ajellomyces capsulata (strain H143) GN=RPS1 PE=3 SV=2) HSP 1 Score: 228.794 bits (582), Expect = 2.082e-59 Identity = 116/182 (63.74%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 D Y +KAPS F VR+VGKTLV RT G K A++ LK R+FEVSL DL N+E+HA+RK++LR ++VQGKN LTNF G+ FT+DKLRSLVRKW TLIEA V VKTTD++ LRLF I FTKR PNQ+K+T YA++SQIR IR+K+ EI+ +A++ L L K I EVIGREI+K+T IYPLQN Sbjct: 28 DEYSVKAPSTFAVRDVGKTLVNRTTGLKNANDSLKGRIFEVSLADLQNDEDHAFRKVKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQTLIEANVTVKTTDDYLLRLFAIAFTKRRPNQIKKTTYARSSQIRAIRKKITEIIQREASTRTLAQLT-KLIPEVIGREIDKSTHGIYPLQN 208
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_BIPLU (40S ribosomal protein S3a OS=Biphyllus lunatus PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.720e-59 Identity = 113/184 (61.41%), Postives = 138/184 (75.00%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEE--EHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 DWYD+KAP F R VGKTLV RTQGTKIASEGLKHRVFEVSL DL N+ E ++RK RL AEDVQG+NVLTNF GM TTDKLRS+V+KW +LIEA DVKTTD + LR+FCIGFT + ++TCYAQ +Q+R IR+KM EI+ + DLK +V K + + I ++IEKA+ IYPL + Sbjct: 29 DWYDVKAPCMFATRQVGKTLVNRTQGTKIASEGLKHRVFEVSLADLQNDNDAERSFRKFRLIAEDVQGRNVLTNFHGMDLTTDKLRSMVKKWQSLIEASADVKTTDGYLLRVFCIGFTNKDQLSQRKTCYAQHTQVRSIRKKMVEIITRDISGSDLKEVVNKLLPDSIAKDIEKASQGIYPLHD 212
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A1_PICST (40S ribosomal protein S1-A OS=Pichia stipitis GN=RPS1A PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.720e-59 Identity = 108/182 (59.34%), Postives = 143/182 (78.57%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 DW+DIKAPS F RNVGKTL+ R+ G K A++GLK R+ EV+L DL E+H+YR ++LR ++VQGKN+LTNF G+SFT+DKLRSLVRKW +L+EA V VKT D++ LR+F + FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T +I+PLQN Sbjct: 28 DWFDIKAPSTFENRNVGKTLINRSTGMKNAADGLKGRIVEVNLADLQGSEDHSYRNVKLRVDEVQGKNLLTNFHGLSFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFALAFTKRQANQVKKTTYAQSSKLREVRKKMSEIMQREVSAVTLAQLTSKLIPEVIGREIEKSTQTIFPLQN 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A2_CLAL4 (40S ribosomal protein S1-B OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1B PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.552e-59 Identity = 110/182 (60.44%), Postives = 142/182 (78.02%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 +W+DIKAPS F RNVGKTL+ ++ G K A++GLK RVFEV L DL E+H+YRK++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T SI PLQN Sbjct: 28 EWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQN 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A1_CLAL4 (40S ribosomal protein S1-A OS=Clavispora lusitaniae (strain ATCC 42720) GN=RPS1A PE=3 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.552e-59 Identity = 110/182 (60.44%), Postives = 142/182 (78.02%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 +W+DIKAPS F RNVGKTL+ ++ G K A++GLK RVFEV L DL E+H+YRK++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR NQVK+T YAQ+S++R++R+KM EIM + ++ L L K I EVIGREIEK+T SI PLQN Sbjct: 28 EWFDIKAPSTFENRNVGKTLINKSTGLKNAADGLKGRVFEVCLADLQGSEDHSYRKVKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTADDYVLRVFAIAFTKRQANQVKKTTYAQSSKLREVRKKMIEIMQREVSNVTLAQLTSKLIPEVIGREIEKSTQSILPLQN 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_PICGU (40S ribosomal protein S1 OS=Pichia guilliermondii GN=RPS1 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.639e-59 Identity = 109/182 (59.89%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 +W+DIKAP+ F R VGKTL+ ++ G K A++GLK RV EV+L DL E+HAYRK++LR ++VQGKN+LTNF G+ FT+DKLRSLVRKW +L+EA V VKT D++ LR+F I FTKR PNQVK+T YAQ+S++R+IR+KM EIM + ++ L L +K I EVIGREIEK+T +I+PLQN Sbjct: 28 EWFDIKAPTTFENRAVGKTLINKSTGLKNAADGLKGRVIEVNLADLQGSEDHAYRKVKLRVDEVQGKNLLTNFHGIDFTSDKLRSLVRKWQSLVEANVTVKTADDYYLRVFAIAFTKRQPNQVKKTTYAQSSKLREIRKKMMEIMQREVSNSTLAQLTQKLIPEVIGREIEKSTQTIFPLQN 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A1_SCHPO (40S ribosomal protein S1-A OS=Schizosaccharomyces pombe GN=rps101 PE=2 SV=2) HSP 1 Score: 226.483 bits (576), Expect = 1.033e-58 Identity = 111/182 (60.99%), Postives = 139/182 (76.37%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 DWYDIKAP+ F V+NVGKTLV RT G K A++ LK R+ EVSL DL +EEH++RK++LR ED+QGK+ LT+F G T+DKLRSLVRKW + IEA +KTTD + R+F IGFT R NQVK+T YAQ+SQIR I +KM +++ QA C +K LV+K I EVIGR IEKAT++IYPLQN Sbjct: 28 DWYDIKAPAFFEVKNVGKTLVNRTAGLKNANDSLKGRILEVSLADLQKDEEHSFRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVIGFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKATNNIYPLQN 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_APLCA (40S ribosomal protein S3a OS=Aplysia californica GN=RPS3A PE=3 SV=2) HSP 1 Score: 226.098 bits (575), Expect = 1.350e-58 Identity = 113/182 (62.09%), Postives = 143/182 (78.57%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 +WYD+KAPS F VR +GKTLVTR+QGTKIAS+ LK RVFEVSL DL N+E +RK +L AE+VQG+NVLTNF GMS T DKL S+V+KW TLIEA VDVKTTD + LR+F IGFTK+ NQVK+TCYAQ +Q++ IR+KM EI+ + +S D+K +V K I + IG++IEK+ IYPL + Sbjct: 29 EWYDVKAPSMFAVRQIGKTLVTRSQGTKIASDNLKGRVFEVSLADLQNDEV-TFRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAIGFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKSCQGIYPLHD 209
BLAST of CF834086 vs. ExPASy Swiss-Prot
Match: RS3A_CRYHO (40S ribosomal protein S3a OS=Cryptosporidium hominis GN=Chro.40360 PE=3 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.763e-58 Identity = 108/182 (59.34%), Postives = 144/182 (79.12%), Query Frame = 1 Query: 136 DWYDIKAPSCFRVRNVGKTLVTRTQGTKIASEGLKHRVFEVSLGDLLNEEEHAYRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVRKWHTLIEAYVDVKTTDNFTLRLFCIGFTKRLPNQVKRTCYAQTSQIRQIRRKMREIMVAQAASCDLKSLVEKFIAEVIGREIEKATSSIYPLQN 681 ++YD++APS F+VRN G T+ ++ QGTK+A + L+HRV+EVSL DL N+E+ A+RKI+L+ ED+QG+ LT F GM T DKL SL+RK+ TLIEA+ +VKT+D + LRLFCI FT+R+ +QVK TCYAQTSQIRQIR+KM EI+ A+A L+ LV+KFI E IG+EIEKA I+PLQ+ Sbjct: 28 EFYDLRAPSTFKVRNFGTTIASKNQGTKLAVDALRHRVYEVSLADLNNDEDQAFRKIKLQCEDIQGRTCLTEFHGMDMTRDKLCSLIRKYQTLIEAHCNVKTSDGYVLRLFCIAFTRRMADQVKSTCYAQTSQIRQIRKKMVEIITAEAEGTTLRDLVKKFIPESIGKEIEKACRHIFPLQH 209 The following BLAST results are available for this feature:
BLAST of CF834086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834086 ID=CF834086; Name=CF834086; organism=Citrus sinensis; type=EST; length=682bpback to top |