CF834089

Overview
NameCF834089
Unique NameCF834089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6745 contig Csv1_Contig6745:1660..2422. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALDOA_PANTR (Fructose-bisphosphate aldolase A OS=Pan troglodytes GN=ALDOA PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.829e-42
Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKAL+DHH+ LEGTLLKPNMVTPG     K + + IA  TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  208 KVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.829e-42
Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKAL+DHH+ LEGTLLKPNMVTPG     K + + IA  TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  208 KVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.694e-42
Identity = 90/157 (57.32%), Postives = 115/157 (73.25%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVT-PDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKAL+DHHV LEGTLLKPNMVT G+ AP  T P+ +A  T+ AL+RT+P AVP + FLSGGQSEE+A+ +LNA+N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  208 KVLAATYKALSDHHVYLEGTLLKPNMVTVGTAAPASTRPEQVAMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 6.302e-42
Identity = 89/157 (56.69%), Postives = 111/157 (70.70%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKAL+DHHV LEGTLLKPNMVTPG   P K +P+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL+V ++ Y
Sbjct:  208 KVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 170.629 bits (431), Expect = 8.230e-42
Identity = 89/157 (56.69%), Postives = 111/157 (70.70%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKAL+DHH+ LEGTLLKPNMVTPG     K + + I   TV AL+RT+P AV  + FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  208 KVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIVMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.075e-41
Identity = 90/157 (57.32%), Postives = 109/157 (69.43%), Query Frame = -3
Query:  295 VLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPKVTPDV--IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 759
            VL+  Y ALN+HHV LEGTLLKPNMVT G       P    I   TV ALQR +P+AVP VVFLSGGQSEE+AT NLNA+NQ+  KKPW+L+FS+GRALQ S L  WAGK+EN+  AQ   L R + NS A++G Y GDA     A++SL V ++ Y
Sbjct:  210 VLSYVYHALNEHHVFLEGTLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 170.244 bits (430), Expect = 1.075e-41
Identity = 88/157 (56.05%), Postives = 111/157 (70.70%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAP-KVTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKAL+DHHV LEGTLLKPNMVTPG   P K +P+ IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL++ ++ Y
Sbjct:  208 KVLAAVYKALSDHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGD-GGAAAQSLYIANHAY 363          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 1.075e-41
Identity = 89/157 (56.69%), Postives = 103/157 (65.61%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKALNDHHV LEGTLLKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N+    +PW LSFS+GRALQ S L AW GK  N +  Q AF+ R  AN +A  G Y      G  A +SL    Y Y
Sbjct:  208 KVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.404e-41
Identity = 90/157 (57.32%), Postives = 103/157 (65.61%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKALNDHHV LEGTLLKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y         + +SL    Y Y
Sbjct:  208 KVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CF834089 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 169.474 bits (428), Expect = 1.834e-41
Identity = 89/157 (56.69%), Postives = 102/157 (64.97%), Query Frame = -3
Query:  295 RVLAACYKALNDHHVLLEGTLLKPNMVTPGSEAPK-VTPDVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 762
            +VLAA YKALNDHHV LEGTLLKPNMVT G    K  TP+ +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R   N +A  G Y      G  + +SL    Y Y
Sbjct:  208 KVLAAVYKALNDHHVYLEGTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
The following BLAST results are available for this feature:
BLAST of CF834089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOA_PANTR2.829e-4257.32Fructose-bisphosphate aldolase A OS=Pan troglodyte... [more]
ALDOA_HUMAN2.829e-4257.32Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALF1_LAMJA3.694e-4257.32Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_RAT6.302e-4256.69Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOA_PONAB8.230e-4256.69Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALF1_CAEEL1.075e-4157.32Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOC_MOUSE1.075e-4156.05Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_MOUSE1.075e-4156.69Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALDOB_SHEEP1.404e-4157.32Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOB_RABIT1.834e-4156.69Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_04O09_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04O09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834089 ID=CF834089; Name=CF834089; organism=Citrus sinensis; type=EST; length=764bp
TTTTTTTTTTTTTTAGCACAAGAAAACATTATCAATTATGTGACACCATT
ACAGAAATTTAGTGCCATTAGGGGAAAGGAAAAAAACCCAAAAACAAAAA
CAAAAGCATAAACAGTTTTCAGTTTAGTTTTGATCAAAACCACTCAAACC
GAAGTTCCCAAGCTTTTTATTGCTCCACCTAAATATGAAAAAGCTCTAAA
ACTATGAATGAGAATGGGCCAACCTAATGTTCATACCGCCATTTACTCTC
ATAAAGTTCATAAAGCACAACACCCAAAGCTTCAACTGTGCTTAGTATTT
GTAGTCCTTGACATGGAGAGACTCTGCGGCACCTTCACCAAGCTGGGCAT
CACCCTTGTAAGTACCGAGGGTAGCCTCAGAGTTGGCCTTGCACCTGACA
AGGAAAGCAGCCTGGGCCTTCTGCACATTCTCTTCCTTTCCAGCCCATGC
CTTGAGAGTGCTCTGCTGAAGTGCACGTCCAAAGGAGAAGGAAAGTGACC
ATGGCTTCTTCGTCTTGAGCTGGTTCATGGCATTAAGGTTGCGGGTAGCC
TCCTCCTCACTCTGCCCACCAGACAAGAACACAACAGCAGGAACTGCTGC
AGGCATAGTGCGTTGCAGGGCCCGGACAGTGTGTTCAGCAATCACGTCCG
GTGTAACTTTGGGAGCTTCAGATCCAGGGGTCACCATGTTGGGCTTCAAA
AGGGTACCCTCAAGAAGGACATGGTGGTCATTCAGAGCCTTGTAGCATGC
AGCAAGAACACGCT
back to top