CF834105

Overview
NameCF834105
Unique NameCF834105
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF834105 vs. ExPASy Swiss-Prot
Match: OMT7_DICDI (O-methyltransferase 7 OS=Dictyostelium discoideum GN=omt7 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.471e-12
Identity = 46/157 (29.30%), Postives = 78/157 (49.68%), Query Frame = 2 
Query:  422 WFQLKDQILEGELSYNKALGM------DFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASS---YPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKAL 865
            +F+L   I E     NK LG       DF+D + T+  F   FN  M   ++  I  I+++   F +   +VDV             KY ++ GI FD+  VI  +     +P +E+V G  ++ +P  D  ++K +LH++DDE C++IL+   K++
Sbjct:  114 YFKLYSTIPES-FEQNKNLGPSSFGFDDFWDIVKTNEHFKYSFNQEMREFSNLSIPTIIKN-TDFSSFNTVVDVGGSHGRIVGELVKKYENLNGIVFDLETVINSSIEKIKHPRIEYVSGSFFESVPSADCYVLKNILHDWDDEKCLEILKTISKSM 268
The following BLAST results are available for this feature:
BLAST of CF834105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
OMT7_DICDI8.471e-1229.30O-methyltransferase 7 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04O23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04O23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834105 ID=CF834105; Name=CF834105; organism=Citrus sinensis; type=EST; length=877bp
CCAGAATAACGCGCAATGGGTTCTTTCACTAAGAGCAAATCAAAAGTGAC
CAACTGAAGAGGAAGAGGTATATTCACATGCCATGGTACTGGGAAGTGCA
ATAGTGCTACCCGCGGTTTTTCAAGCAGTAGTAAATCTTGATGTTCTTGA
TATCATAAACAAAGCTGGTCCTGGTGCTGAGCTTTCTGCTTCAGAGATTG
CTTCTCAAATTCCCACCAAAAATCCTGAGGGTGCTGCCAAGATGTTGGAT
CGGGTTCTCGGGCTTCTGGTGAGCTTCAATATCCTTTGTTGCTCTTTCAG
TACTCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATG
TGAGTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTT
GACAAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGA
AGGAGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATC
TGGGCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGC
CAGACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCA
GAATATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTG
CGACCATAATTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTA
CCTCATGTTATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGG
CGGAGATATGTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGT
GGATGCTTCATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAAT
TGTTACAAAGCTCTTCCAAATGATGGA
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