CF834106

Overview
NameCF834106
Unique NameCF834106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI2_LOTJA (Chalcone--flavonone isomerase 2 OS=Lotus japonicus GN=CHI2 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 1.201e-76
Identity = 145/194 (74.74%), Postives = 164/194 (84.54%), Query Frame = -3
Query:  261 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 839
            ++PP S  + FLGGAGERGL I+ KFVKFTAIG+YL+D AVP LA KWKGK  +ELTESV+FFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIYTD E KAI+KF  VFKD+ FPPGSSILFT  P GSL ISFSKDGSIP+   AVI++ LLSEAVLESMIG +GVSPAAK+SLA RLS L
Sbjct:   21 IKPPASANTLFLGGAGERGLHIQDKFVKFTAIGIYLQDTAVPSLAVKWKGKPVDELTESVQFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKHLGIYTDEEGKAIDKFVSVFKDQTFPPGSSILFTVLPKGSLAISFSKDGSIPEVESAVIDNKLLSEAVLESMIGAHGVSPAAKQSLASRLSEL 214          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI2_CHRMO (Chalcone--flavonone isomerase 2 OS=Chrysanthemum morifolium GN=CHI2 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 7.781e-76
Identity = 141/201 (70.15%), Postives = 165/201 (82.09%), Query Frame = -3
Query:  240 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK 839
            V+PPG T + FLGGAG RG+EI+G FVKFT IGVYLED A+PLLAGKWKGKTAEEL  SVEFFRD+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   I+KF EVFKDE FPPG+SILFT SP GSLTISFSKDG IP+    V+E+  L++AV+ES+IGKNGVSPA K+SLA RLS L+N   +K
Sbjct:   21 VKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSPATKQSLASRLSDLMNHFDEK 221          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI1_CHRMO (Chalcone--flavonone isomerase 1 OS=Chrysanthemum morifolium GN=CHI1 PE=2 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.734e-75
Identity = 140/201 (69.65%), Postives = 165/201 (82.09%), Query Frame = -3
Query:  240 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK 839
            V+PPG T + FLGGAG RG+EI+G FVKFT IGVYLED A+PLLAGKWKGKTAEEL  SVEFFRD+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G YTDA+   I+KF EVFKDE FPPG+SILFT SP GSLTISFSKDG IP+    V+E+  L++AV+ES+IGKNGVSPA K+SLA RL+ L+N   +K
Sbjct:   21 VKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSPATKQSLASRLADLMNHFDEK 221          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_DIACA (Chalcone--flavonone isomerase OS=Dianthus caryophyllus GN=CHI PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 6.587e-75
Identity = 141/196 (71.94%), Postives = 168/196 (85.71%), Query Frame = -3
Query:  255 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 839
            V+PPGS K+ FLGGAG RGLEI+GKF+KFTAI VY+EDDAV  LA KWKGKTA+ELT+SV+FF+D+VTGPFEKF +VTMILPLTG QYSEKV ENC+A WK  G YTDAE++A +KF +VFK+   PPG+SILFTQSP GSLTISFSKDGS+P++G  VI +  LSEAVL+S+IGK+GVSP AKKSL+ RLS L+N
Sbjct:   18 VKPPGSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAVKWKGKTADELTDSVDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGTYTDAESEATQKFLQVFKNVSNPPGASILFTQSPLGSLTISFSKDGSLPENGKEVIVNKQLSEAVLQSIIGKHGVSPEAKKSLSARLSDLIN 213          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI1_ARATH (Chalcone--flavonone isomerase 1 OS=Arabidopsis thaliana GN=CHI1 PE=2 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 4.270e-74
Identity = 139/201 (69.15%), Postives = 165/201 (82.09%), Query Frame = -3
Query:  240 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK 839
            V+ P S+   FLGGAG RGL+I+GKFV FT IGVYLE +AVP L+ KWKGKT EELTES+ FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  G+YTD EAKA+EKF E+FK+E FPPGSSILF  SP GSLT++FSKD SIP+ G+AVIE+ LL+EAVLES+IGKNGVSP  + S+AERLS L+    D+
Sbjct:   30 VKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSKDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSVAERLSQLMMKNKDE 230          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.577e-74
Identity = 142/195 (72.82%), Postives = 165/195 (84.62%), Query Frame = -3
Query:  258 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 839
            V+PPGS K+ FLGGAG RGLEIEGKF+KFTAIGVYLE+DAV  LA KWKGKTAEE+ +S +FF ++VTGPFEKF KVT ILPLTG QYSEKV ENC+A WK  G +TDAE +A +KF +VFK+E+F PG+SILFTQSP GSLTISFSKDGSIP+   A+IE+  LSEAVLES+IGK GVSP+AK+SLA RLS LL
Sbjct:   21 VKPPGSDKTFFLGGAGVRGLEIEGKFIKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLTISFSKDGSIPEKENAIIENKQLSEAVLESIIGKKGVSPSAKQSLAARLSDLL 215          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.577e-74
Identity = 142/195 (72.82%), Postives = 162/195 (83.08%), Query Frame = -3
Query:  258 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 839
            V P GST + FL GAG RGLEIEGKFVKFTAIGVYLE+ A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTD E +AIEKF +VF+ E FPPG+SI+FTQSP G LTISF+KD S+     AVIE+  LSEAVLES+IGK+GVSPAAK S+AER++ LL
Sbjct:   21 VNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSPAAKCSVAERVAELL 215          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_TOBAC (Chalcone--flavonone isomerase OS=Nicotiana tabacum GN=CHI PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 7.283e-74
Identity = 140/194 (72.16%), Postives = 162/194 (83.51%), Query Frame = -3
Query:  261 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 839
            V PPGST + FL GAG RGLEIEGKFVKFTAIGVYLE+ A+P LA KWK K++EEL  S++FFRD+VTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G YTDAE++AIEK   +F++E FPPG+SILFTQSP G+LTISF KD SI   G AVIE+  LSEAVLES+IGK+GVSPAAK S+AER+S L
Sbjct:   16 VNPPGSTNTFFLAGAGNRGLEIEGKFVKFTAIGVYLEESALPFLAAKWKSKSSEELANSLDFFRDIVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKAIGTYTDAESQAIEKLLNIFQNETFPPGASILFTQSPVGALTISFIKDDSITGTGNAVIENKQLSEAVLESIIGKHGVSPAAKCSIAERVSGL 209          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_ARALP (Chalcone--flavonone isomerase OS=Arabidopsis lyrata subsp. petraea GN=CHI PE=3 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.768e-73
Identity = 137/195 (70.26%), Postives = 163/195 (83.59%), Query Frame = -3
Query:  258 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 839
            V+ P S+   FLGGAG RGL+I+GKFV FT IGVYLE +AVP L+ KWKGKT EEL+ESV FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  GIYTD EAKA+EKF E+FK+E FPPGSSILF  SP GSLT++FS+D SIP+ G+AVIE+ LL+EAVLES+IGKNGVSP  + S+AERL+ L+
Sbjct:   28 VKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSLSVKWKGKTTEELSESVPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSRDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSIAERLAKLM 222          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_ALLCE (Chalcone--flavonone isomerase OS=Allium cepa GN=CHI PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.768e-73
Identity = 133/194 (68.56%), Postives = 160/194 (82.47%), Query Frame = -3
Query:  255 PPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 833
            PPGS+K+HFLGGAG RGLEI GKF+ FTAIG+YLE D++P LA KWKGKT EEL  S++FFRD+ TGPFEKF  VTMILPLTG QYSEKV ENC+A WK  GIYTDAEA A++KF + FK E FPPGSSILFT +P G+L I+FSKDGS+ KD   +IE+  L++AVLES+IG++GVSPAAK S+A RLS ++N
Sbjct:   20 PPGSSKTHFLGGAGVRGLEIGGKFIAFTAIGIYLETDSIPFLADKWKGKTGEELAGSLDFFRDICTGPFEKFTNVTMILPLTGEQYSEKVTENCVAYWKAIGIYTDAEASAVDKFKQAFKPESFPPGSSILFTHTPSGTLKIAFSKDGSVSKDEGVLIENKALTQAVLESIIGEHGVSPAAKLSIASRLSEIMN 213          
The following BLAST results are available for this feature:
BLAST of CF834106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI2_LOTJA1.201e-7674.74Chalcone--flavonone isomerase 2 OS=Lotus japonicus... [more]
CFI2_CHRMO7.781e-7670.15Chalcone--flavonone isomerase 2 OS=Chrysanthemum m... [more]
CFI1_CHRMO1.734e-7569.65Chalcone--flavonone isomerase 1 OS=Chrysanthemum m... [more]
CFI_DIACA6.587e-7571.94Chalcone--flavonone isomerase OS=Dianthus caryophy... [more]
CFI1_ARATH4.270e-7469.15Chalcone--flavonone isomerase 1 OS=Arabidopsis tha... [more]
CFI_VERHY5.577e-7472.82Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI1_PETHY5.577e-7472.82Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI_TOBAC7.283e-7472.16Chalcone--flavonone isomerase OS=Nicotiana tabacum... [more]
CFI_ARALP2.768e-7370.26Chalcone--flavonone isomerase OS=Arabidopsis lyrat... [more]
CFI_ALLCE2.768e-7368.56Chalcone--flavonone isomerase OS=Allium cepa GN=CH... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04P01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834106 ID=CF834106; Name=CF834106; organism=Citrus sinensis; type=EST; length=841bp
CTTTTTATTGGTAAGAGTCTGTATATTCAACCAGTACAAAGAACAGGAAA
AACCTTGTCAGGGACATCAGCATTCGAAAATTAACTCAGAATTTGGGAGC
TCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAGGAAAGGACACT
AATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACAACTCTGCCTTC
GCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCATCTTATCACTAG
TTACATTCAACAGTGCTGATAGTCTTTCAGCCAAACTCTTCTTTGCTGCA
GGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACTGCCTCAGAAAG
CAGATTACTCTCTATTACCGCAACACCATCTTTCGGTATTGAACCGTCTT
TGGAGAAGCTGATAGTCAATGATCCTGGTGATTGAGTAAAGAGAATTGAG
GATCCTGGTGGGAAAATTTCATCCTTGAAGACCTCAGTGAATTTTTCAAT
AGCTTTGGCTTCAGCATCAGTGTAAATTCCAAAAAATTTCCATATGGCAA
TGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCGCCAGTTAATGGCAAG
ATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTGACGACGTCTCT
GAAGAACTCAACGGATTCCGTCAACTCCTCTGCAGTCTTCCCCTTCCATT
TGCCGGCGAGTAACGGCACGGCGTCATCCTCCAAGTACACTCCTATCGCC
GTGAACTTCACGAACTTCCCTTCAATCTCCAATCCTCTCTCCCCTGCGCC
GCCGAGGAAATGCGACTTTGTTGATCCTGGAGGTTGCACGG
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