CF834106

Overview
NameCF834106
Unique NameCF834106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI3_SOYBN (Chalcone--flavonone isomerase 3 OS=Glycine max GN=CHI3 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.681e-68
Identity = 137/194 (70.62%), Postives = 157/194 (80.93%), Query Frame = -3
Query:  261 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 839
            V+PP S  + FL GAG RGL+I   FVKFTAI VYL+ DA+  L+ KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF  VFKD  FPPGSSILFT SP GSLTISFS D +IP+   AVIE+ LLSEAVLESMIGKNGVSPAAK+SLA RLS L
Sbjct:   20 VKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICVYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSHL 213          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI2A_SOYBN (Chalcone--flavonone isomerase 2-A OS=Glycine max GN=CHI2-A PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 3.501e-68
Identity = 136/194 (70.10%), Postives = 157/194 (80.93%), Query Frame = -3
Query:  261 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 839
            V+PP S  + FL GAG RGL+I   FVKFTAI +YL+ DA+  L+ KWK K+  +LTES +FF D+VTGPFEKFM+VTMI PLTG QYSEKVAENC+AIW+  GIYTD+EA+AI+KF  VFKD  FPPGSSILFT SP GSLTISFS D +IP+   AVIE+ LLSEAVLESMIGKNGVSPAAK+SLA RLS L
Sbjct:   20 VKPPCSPNTFFLAGAGVRGLQIHHAFVKFTAICIYLQYDALSFLSVKWKTKSTHQLTESDQFFSDIVTGPFEKFMQVTMIKPLTGQQYSEKVAENCVAIWRSLGIYTDSEAEAIDKFLSVFKDLTFPPGSSILFTVSPNGSLTISFSGDETIPEVTSAVIENKLLSEAVLESMIGKNGVSPAAKQSLASRLSHL 213          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 3.277e-66
Identity = 126/194 (64.95%), Postives = 155/194 (79.90%), Query Frame = -3
Query:  258 PPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQ--SPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 833
            PPGS+ S FL GAGERGLEI+ +FV FTAIGVYLED AV  L  KWKGKTA++L  + +FFRD+ TGPFEKF ++TM+ PL+G QYSEKV ENC+A WK  G YT+AEA A+EKF E  K+E FPPG+SILFT   SP SLTI+F ++GS+P+ G  VIES  LSEA+LES+IGK+GVSP AK+S+A+RLS +L
Sbjct:   24 PPGSSSSLFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESIIGKHGVSPGAKRSVAQRLSEIL 217          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_ORYSJ (Chalcone--flavonone isomerase OS=Oryza sativa subsp. japonica GN=CHI PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.623e-65
Identity = 128/201 (63.68%), Postives = 153/201 (76.12%), Query Frame = -3
Query:  246 QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGV--AVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTS 836
            +PPGS  +HFL GAG RG+EI G F+KFTAIGVYLE+ A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF E FK   FPPG+SILFT S PG LT++FSKD S+P+  V  A IE+  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:   19 RPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_ORYSI (Chalcone--flavonone isomerase OS=Oryza sativa subsp. indica GN=CHI PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 3.623e-65
Identity = 128/201 (63.68%), Postives = 153/201 (76.12%), Query Frame = -3
Query:  246 QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGV--AVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTS 836
            +PPGS  +HFL GAG RG+EI G F+KFTAIGVYLE+ A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+YTDAE  A +KF E FK   FPPG+SILFT S PG LT++FSKD S+P+  V  A IE+  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:   19 RPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 8.924e-64
Identity = 125/195 (64.10%), Postives = 148/195 (75.90%), Query Frame = -3
Query:  258 QPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 836
            +PPGS  +HFL GAG RG+EI G F+KFTAIGVYL+ DA V  LA KW GK A +L     FFRDVVTG FEKF +VTMILPLTGAQYS+KV ENC+A WK  G+YTDAEA A++KF E F    F PG+SILFT SP G LT++FSKD S+P+ G   IE+  L EAVLES+IG++GVSPAAK SLA R++ LL
Sbjct:   18 RPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESIIGEHGVSPAAKLSLANRVAELL 212          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI1A_SOYBN (Chalcone--flavonone isomerase 1A OS=Glycine max GN=CHI1A PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.414e-61
Identity = 118/196 (60.20%), Postives = 150/196 (76.53%), Query Frame = -3
Query:  255 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 839
            V  P S K++FLGGAGERGL IEGKF+KFT IGVYLED AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF E FK+  F PG+S+ + QSP G L +SFS+D +IP+   AVIE+  +S AVLE+MIG++ VSP  K+SLA RL A+L+
Sbjct:   18 VTSPASGKTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGASVFYRQSPDGILGLSFSEDATIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 213          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_PUELO (Chalcone--flavonone isomerase OS=Pueraria lobata GN=CHI PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.643e-59
Identity = 114/196 (58.16%), Postives = 150/196 (76.53%), Query Frame = -3
Query:  255 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 839
            V  P S +++FLGGAGERGL IEGKF+KFT IGVYLED AV  LA KWKGK +EEL E+++F+RD+++GPFEK ++ + ILPL+G +YS+KV ENC+A  K  G Y DAEA AIEKF E FK+  F PG+++ + QSP G L +SFS+D +IP +  AVIE+  +S AVLE+MIG++ VSP  K+SLA RL A+L+
Sbjct:   24 VTSPASGRTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVSSLAAKWKGKPSEELVETLDFYRDIISGPFEKLIRGSKILPLSGVEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFQPGATVFYRQSPDGVLGLSFSEDVTIPDNEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 219          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI_PHAVU (Chalcone--flavonone isomerase OS=Phaseolus vulgaris GN=CHI PE=2 SV=2)

HSP 1 Score: 226.868 bits (577), Expect = 1.129e-58
Identity = 114/196 (58.16%), Postives = 147/196 (75.00%), Query Frame = -3
Query:  255 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 839
            V  P + K++FLGGAGERGL IEGKF+KFTAIGVYLED AV  LA KWKGK +EEL  +++F+RD+++GPFEK ++ + IL L+G +YS KV ENC+A  K  G Y DAEAK IE+F E FK   FPPG+S+ + QSP G L +SFS+D +IP +   VIE+  +S AVLE+MIG++ VSP  K+SLA RL A+LN
Sbjct:   21 VTSPATAKTYFLGGAGERGLTIEGKFIKFTAIGVYLEDKAVASLATKWKGKPSEELINTLDFYRDIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGTYGDAEAKGIEEFAEAFKKVNFPPGASVFYRQSPDGILGLSFSEDATIPGEEAVVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLN 216          
BLAST of CF834106 vs. ExPASy Swiss-Prot
Match: CFI1_MEDSA (Chalcone--flavonone isomerase 1 OS=Medicago sativa GN=CHI1 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.129e-57
Identity = 114/196 (58.16%), Postives = 147/196 (75.00%), Query Frame = -3
Query:  255 VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYTDAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 839
            V  P + KS+FLGGAGERGL IEG F+KFTAIGVYLED AV  LA KWKGK++EEL E+++F+RD+++GPFEK ++ + I  L+G +YS KV ENC+A  K  G Y DAEA+A++KF E FK   FPPG+S+ + QSP G L +SFS D SIP+   A+IE+  +S AVLE+MIG++ VSP  K+ LA RL ALLN
Sbjct:   19 VTSPVTGKSYFLGGAGERGLTIEGNFIKFTAIGVYLEDIAVASLAAKWKGKSSEELLETLDFYRDIISGPFEKLIRGSKIRELSGPEYSRKVMENCVAHLKSVGTYGDAEAEAMQKFAEAFKPVNFPPGASVFYRQSPDGILGLSFSPDTSIPEKEAALIENKAVSSAVLETMIGEHAVSPDLKRCLAARLPALLN 214          
The following BLAST results are available for this feature:
BLAST of CF834106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI3_SOYBN2.681e-6870.62Chalcone--flavonone isomerase 3 OS=Glycine max GN=... [more]
CFI2A_SOYBN3.501e-6870.10Chalcone--flavonone isomerase 2-A OS=Glycine max G... [more]
CFI_CANGE3.277e-6664.95Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_ORYSJ3.623e-6563.68Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_ORYSI3.623e-6563.68Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_HORVU8.924e-6464.10Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]
CFI1A_SOYBN5.414e-6160.20Chalcone--flavonone isomerase 1A OS=Glycine max GN... [more]
CFI_PUELO8.643e-5958.16Chalcone--flavonone isomerase OS=Pueraria lobata G... [more]
CFI_PHAVU1.129e-5858.16Chalcone--flavonone isomerase OS=Phaseolus vulgari... [more]
CFI1_MEDSA2.129e-5758.16Chalcone--flavonone isomerase 1 OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04P01_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834106 ID=CF834106; Name=CF834106; organism=Citrus sinensis; type=EST; length=841bp
CTTTTTATTGGTAAGAGTCTGTATATTCAACCAGTACAAAGAACAGGAAA
AACCTTGTCAGGGACATCAGCATTCGAAAATTAACTCAGAATTTGGGAGC
TCTAGCTCTCACAAAGGCAACACAACTGAGAGTCCATAGGAAAGGACACT
AATTTAACATTAAAGAAAAAAAAGTTTGCCAATTTAACAACTCTGCCTTC
GCTTATTATTTGGCAAACTTTTCAACTTCTTCATTTCATCTTATCACTAG
TTACATTCAACAGTGCTGATAGTCTTTCAGCCAAACTCTTCTTTGCTGCA
GGAGAAACACCATTCTTGCCGATCATCGACTCCAGTACTGCCTCAGAAAG
CAGATTACTCTCTATTACCGCAACACCATCTTTCGGTATTGAACCGTCTT
TGGAGAAGCTGATAGTCAATGATCCTGGTGATTGAGTAAAGAGAATTGAG
GATCCTGGTGGGAAAATTTCATCCTTGAAGACCTCAGTGAATTTTTCAAT
AGCTTTGGCTTCAGCATCAGTGTAAATTCCAAAAAATTTCCATATGGCAA
TGCAATTTTCGGCAACCTTCTCTGAGTATTGTGCGCCAGTTAATGGCAAG
ATCATTGTCACCTTCATGAATTTCTCAAAGGGACCTGTGACGACGTCTCT
GAAGAACTCAACGGATTCCGTCAACTCCTCTGCAGTCTTCCCCTTCCATT
TGCCGGCGAGTAACGGCACGGCGTCATCCTCCAAGTACACTCCTATCGCC
GTGAACTTCACGAACTTCCCTTCAATCTCCAATCCTCTCTCCCCTGCGCC
GCCGAGGAAATGCGACTTTGTTGATCCTGGAGGTTGCACGG
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