CF834107

Overview
NameCF834107
Unique NameCF834107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:73..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_CLITE (Chalcone--flavonone isomerase OS=Clitoria ternatea GN=CHI PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 1.807e-81
Identity = 155/215 (72.09%), Postives = 175/215 (81.40%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSD 653
            S+T ++V+NV F P+V+PP S  + FLGGAG RGL+IE KFVKFTAIG+YL DDA+P LA KW GK+  ELTESVEFFRD+VTGPFEKFM+VTMILPLTG QYSEKV+ENC+AIWK  GIY DAEAKAI+KF  VFKDE FPPGSSILFT SP GSL I+FSKDGS       VIE+ LLSEAVLESMIGK+GVSPAAK+SLA RLS L     D
Sbjct:    6 SLTAVEVDNVVFPPAVKPPSSADTFFLGGAGVRGLQIEDKFVKFTAIGIYLHDDALPFLAAKWNGKSDHELTESVEFFRDIVTGPFEKFMQVTMILPLTGQQYSEKVSENCVAIWKSLGIYTDAEAKAIDKFVSVFKDETFPPGSSILFTVSPKGSLGITFSKDGST----TTVIENKLLSEAVLESMIGKHGVSPAAKQSLASRLSGLFKAGGD 216          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_VERHY (Chalcone--flavonone isomerase OS=Verbena hybrida GN=CHI PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.408e-80
Identity = 151/211 (71.56%), Postives = 178/211 (84.36%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            PS+TE+QVE+V F P+V+PPGS K+ FLGGAG RGLEIEGKF+KFTAIGVYLE+DAV  LA KWKGKTAEE+ +S +FF ++VTGPFEKF KVT ILPLTG QYSEKV ENC+A WK  G + DAE +A +KF +VFK+E+F PG+SILFTQSP GSLTISFSKDGSIP+   A+IE+  LSEAVLES+IGK GVSP+AK+SLA RLS LL
Sbjct:    5 PSITEVQVESVVFPPAVKPPGSDKTFFLGGAGVRGLEIEGKFIKFTAIGVYLENDAVTSLAAKWKGKTAEEVADSGDFFAEIVTGPFEKFTKVTTILPLTGQQYSEKVVENCVAYWKAIGKFTDAEDEATKKFLQVFKNEMFHPGASILFTQSPQGSLTISFSKDGSIPEKENAIIENKQLSEAVLESIIGKKGVSPSAKQSLAARLSDLL 215          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_ARALP (Chalcone--flavonone isomerase OS=Arabidopsis lyrata subsp. petraea GN=CHI PE=3 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 4.451e-80
Identity = 148/211 (70.14%), Postives = 177/211 (83.89%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            PSVT+LQV++VTF PSV+ P S+   FLGGAG RGL+I+GKFV FT IGVYLE +AVP L+ KWKGKT EEL+ESV FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  GIY D EAKA+EKF E+FK+E FPPGSSILF  SP GSLT++FS+D SIP+ G+AVIE+ LL+EAVLES+IGKNGVSP  + S+AERL+ L+
Sbjct:   12 PSVTKLQVDSVTFDPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLESNAVPSLSVKWKGKTTEELSESVPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKSLGIYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSRDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSIAERLAKLM 222          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI1_ARATH (Chalcone--flavonone isomerase 1 OS=Arabidopsis thaliana GN=CHI1 PE=2 SV=2)

HSP 1 Score: 297.36 bits (760), Expect = 4.451e-80
Identity = 148/217 (68.20%), Postives = 178/217 (82.03%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK 656
            P+VT+L V++VTF PSV+ P S+   FLGGAG RGL+I+GKFV FT IGVYLE +AVP L+ KWKGKT EELTES+ FFR++VTG FEKF+KVTM LPLTG QYSEKV ENC+AIWK  G+Y D EAKA+EKF E+FK+E FPPGSSILF  SP GSLT++FSKD SIP+ G+AVIE+ LL+EAVLES+IGKNGVSP  + S+AERLS L+    D+
Sbjct:   14 PAVTKLHVDSVTFVPSVKSPASSNPLFLGGAGVRGLDIQGKFVIFTVIGVYLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKVTENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSKDDSIPETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSVAERLSQLMMKNKDE 230          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI2_CHRMO (Chalcone--flavonone isomerase 2 OS=Chrysanthemum morifolium GN=CHI2 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 5.814e-80
Identity = 148/216 (68.52%), Postives = 173/216 (80.09%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK 656
            S T L VEN+ F  SV+PPG T + FLGGAG RG+EI+G FVKFT IGVYLED A+PLLAGKWKGKTAEEL  SVEFFRD+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G Y DA+   I+KF EVFKDE FPPG+SILFT SP GSLTISFSKDG IP+    V+E+  L++AV+ES+IGKNGVSPA K+SLA RLS L+N   +K
Sbjct:    6 SATSLNVENIVFPSSVKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSPATKQSLASRLSDLMNHFDEK 221          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI1_CHRMO (Chalcone--flavonone isomerase 1 OS=Chrysanthemum morifolium GN=CHI1 PE=2 SV=2)

HSP 1 Score: 295.819 bits (756), Expect = 1.295e-79
Identity = 147/216 (68.06%), Postives = 173/216 (80.09%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTSDK 656
            S T L VEN+ F  SV+PPG T + FLGGAG RG+EI+G FVKFT IGVYLED A+PLLAGKWKGKTAEEL  SVEFFRD+VTGPF+KF +VTMILPLTG QYSEKV+E C+ +WK  G Y DA+   I+KF EVFKDE FPPG+SILFT SP GSLTISFSKDG IP+    V+E+  L++AV+ES+IGKNGVSPA K+SLA RL+ L+N   +K
Sbjct:    6 SATSLNVENIVFPSSVKPPGDTNTLFLGGAGVRGMEIQGNFVKFTGIGVYLEDKAIPLLAGKWKGKTAEELVNSVEFFRDIVTGPFKKFTQVTMILPLTGKQYSEKVSEMCVGVWKAHGTYTDADGATIDKFLEVFKDENFPPGASILFTTSPDGSLTISFSKDGMIPEAANIVLENEKLAQAVIESVIGKNGVSPATKQSLASRLADLMNHFDEK 221          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI1_PETHY (Chalcone--flavonone isomerase A OS=Petunia hybrida GN=CHI1 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 2.885e-79
Identity = 150/210 (71.43%), Postives = 173/210 (82.38%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            SVT++QVEN  F P+V P GST + FL GAG RGLEIEGKFVKFTAIGVYLE+ A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G Y D E +AIEKF +VF+ E FPPG+SI+FTQSP G LTISF+KD S+     AVIE+  LSEAVLES+IGK+GVSPAAK S+AER++ LL
Sbjct:    6 SVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSPAAKCSVAERVAELL 215          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_DIACA (Chalcone--flavonone isomerase OS=Dianthus caryophyllus GN=CHI PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 1.096e-78
Identity = 146/210 (69.52%), Postives = 177/210 (84.29%), Query Frame = 3
Query:   15 VTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            +T++QVE+  F P V+PPGS K+ FLGGAG RGLEI+GKF+KFTAI VY+EDDAV  LA KWKGKTA+ELT+SV+FF+D+VTGPFEKF +VTMILPLTG QYSEKV ENC+A WK  G Y DAE++A +KF +VFK+   PPG+SILFTQSP GSLTISFSKDGS+P++G  VI +  LSEAVL+S+IGK+GVSP AKKSL+ RLS L+N
Sbjct:    4 ITQIQVESHVFPPEVKPPGSDKTFFLGGAGVRGLEIQGKFIKFTAIAVYIEDDAVSSLAVKWKGKTADELTDSVDFFKDIVTGPFEKFTQVTMILPLTGQQYSEKVVENCVAHWKSVGTYTDAESEATQKFLQVFKNVSNPPGASILFTQSPLGSLTISFSKDGSLPENGKEVIVNKQLSEAVLQSIIGKHGVSPEAKKSLSARLSDLIN 213          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI3_PETHY (Chalcone--flavonone isomerase C OS=Petunia hybrida GN=CHI3 PE=2 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 3.190e-78
Identity = 148/210 (70.48%), Postives = 172/210 (81.90%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            SVT++QVEN  F P+V P GST + FL GAG RGLEIEGKFVKFTAIGVYLE+ A+P LA KWKGKT +ELT+SVEFFRDVVTGPFEKF +VT ILPLTG QYSEKVAENC+A WK  G Y D E +AIEKF +VF+ E FPPG+SI+FTQSP G LTISF+KD S+     AVIE+  LSEAVLES+IGK+GVSPAAK ++AER++ LL
Sbjct:    6 SVTKMQVENYAFAPTVNPAGSTNTLFLAGAGHRGLEIEGKFVKFTAIGVYLEESAIPFLAEKWKGKTPQELTDSVEFFRDVVTGPFEKFTRVTTILPLTGKQYSEKVAENCVAHWKGIGTYTDDEGRAIEKFLDVFRSETFPPGASIMFTQSPLGLLTISFAKDDSVTGTANAVIENKQLSEAVLESIIGKHGVSPAAKCNVAERVAELL 215          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_IPOBA (Chalcone--flavonone isomerase OS=Ipomoea batatas GN=CHI PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.583e-77
Identity = 145/212 (68.40%), Postives = 174/212 (82.08%), Query Frame = 3
Query:    3 ASPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 635
            A P V E++VE+  F  + +PPG+ K+  LGGAG RGL I+GKFVKFTAIGVYLE DAVP LA KW GK+AEELT+SV+FFRD+VTGPFEK  ++TMILPL+G QYSEKV+ENC+A WK  G+Y DAE+KAIEKF +VF D++FPPG+SI FTQSP GSLTISFSK+GS+P+   AVIE+  LSEAVLES+IG  GVSP AK+SLA RLS L
Sbjct:    3 APPCVAEVKVESYVFPATAKPPGTAKTLILGGAGARGLNIDGKFVKFTAIGVYLEADAVPSLAVKWNGKSAEELTDSVQFFRDIVTGPFEKLTRITMILPLSGKQYSEKVSENCVAFWKAAGMYGDAESKAIEKFNDVFSDQMFPPGASIFFTQSPHGSLTISFSKEGSMPEIASAVIENKPLSEAVLESIIGSKGVSPEAKQSLAVRLSEL 214          
The following BLAST results are available for this feature:
BLAST of CF834107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_CLITE1.807e-8172.09Chalcone--flavonone isomerase OS=Clitoria ternatea... [more]
CFI_VERHY3.408e-8071.56Chalcone--flavonone isomerase OS=Verbena hybrida G... [more]
CFI_ARALP4.451e-8070.14Chalcone--flavonone isomerase OS=Arabidopsis lyrat... [more]
CFI1_ARATH4.451e-8068.20Chalcone--flavonone isomerase 1 OS=Arabidopsis tha... [more]
CFI2_CHRMO5.814e-8068.52Chalcone--flavonone isomerase 2 OS=Chrysanthemum m... [more]
CFI1_CHRMO1.295e-7968.06Chalcone--flavonone isomerase 1 OS=Chrysanthemum m... [more]
CFI1_PETHY2.885e-7971.43Chalcone--flavonone isomerase A OS=Petunia hybrida... [more]
CFI_DIACA1.096e-7869.52Chalcone--flavonone isomerase OS=Dianthus caryophy... [more]
CFI3_PETHY3.190e-7870.48Chalcone--flavonone isomerase C OS=Petunia hybrida... [more]
CFI_IPOBA1.583e-7768.40Chalcone--flavonone isomerase OS=Ipomoea batatas G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04P01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834107 ID=CF834107; Name=CF834107; organism=Citrus sinensis; type=EST; length=658bp
AGGCCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCACTTTCACG
CCGTCCGTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCGGCGGCGC
AGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTCACGGCGA
TAGGAGTGTACTTGGAGGATGACGCCGTGCCGTTACTCGCCGGCAAATGG
AAGGGGAAGACTGCAGAGGAGTTGACGGAATCCGTTGAGTTCTTCAGAGA
CGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATGATCTTGC
CATTAACTGGCGCACAATACTCAGAGAAGGTTGCCGAAAATTGCATTGCC
ATATGGAAATTTTTTGGAATTTACGCTGATGCTGAAGCCAAAGCTATTGA
AAAATTCACTGAGGTCTTCAAGGATGAAATTTTCCCACCAGGATCCTCAA
TTCTCTTTACTCAATCACCAGGATCATTGACTATCAGCTTCTCCAAAGAC
GGTTCAATACCGAAAGATGGTGTTGCGGTAATAGAGAGTAATCTGCTTTC
TGAGGCAGTACTGGAGTCGATGATCGGCAAGAATGGTGTTTCTCCTGCAG
CAAAGAAGAGTTTGGCTGAAAGACTATCAGCACTGTTGAATGTAACTAGT
GATAAGAT
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