CF834107

Overview
NameCF834107
Unique NameCF834107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1057 contig Csv1_Contig1057:73..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_TOBAC (Chalcone--flavonone isomerase OS=Nicotiana tabacum GN=CHI PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.795e-74
Identity = 142/206 (68.93%), Postives = 167/206 (81.07%), Query Frame = 3
Query:   24 LQVENVTFTPS-VQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSAL 635
            + +EN  F  + V PPGST + FL GAG RGLEIEGKFVKFTAIGVYLE+ A+P LA KWK K++EEL  S++FFRD+VTGPFEKF +VTMILPLTG QYSEKVAENC+A WK  G Y DAE++AIEK   +F++E FPPG+SILFTQSP G+LTISF KD SI   G AVIE+  LSEAVLES+IGK+GVSPAAK S+AER+S L
Sbjct:    4 ITIENYVFPSTMVNPPGSTNTFFLAGAGNRGLEIEGKFVKFTAIGVYLEESALPFLAAKWKSKSSEELANSLDFFRDIVTGPFEKFTRVTMILPLTGKQYSEKVAENCVAHWKAIGTYTDAESQAIEKLLNIFQNETFPPGASILFTQSPVGALTISFIKDDSITGTGNAVIENKQLSEAVLESIIGKHGVSPAAKCSIAERVSGL 209          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_MAIZE (Chalcone--flavonone isomerase OS=Zea mays GN=CHI PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 1.875e-70
Identity = 136/201 (67.66%), Postives = 152/201 (75.62%), Query Frame = 3
Query:   39 VTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            V F P  +PPGS  SHFLGGAG RG+EI G F+KFTAIGVYLED AVP LA KW GKTA+EL     FFRDVVTG FEKF +VTMILPLTG QY+EKV ENC+A WK  G+Y DAE  A+EKF EVFK E F PG SILFT SP G LT++FSKD S+P  G   IE+  L EAVLES+IG+ GVSPAAK SLA R+S LL
Sbjct:   11 VVFPPVARPPGSAGSHFLGGAGVRGVEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWKAAGLYTDAEGVAVEKFREVFKPETFAPGRSILFTHSPAGVLTVAFSKDSSVPAAGGVAIENKRLCEAVLESIIGERGVSPAAKLSLAARVSELL 211          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis GN=CHI PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.073e-69
Identity = 132/214 (61.68%), Postives = 165/214 (77.10%), Query Frame = 3
Query:    3 ASPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQ--SPGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            A  S+ +L +  VTF P+  PPGS+ S FL GAGERGLEI+ +FV FTAIGVYLED AV  L  KWKGKTA++L  + +FFRD+ TGPFEKF ++TM+ PL+G QYSEKV ENC+A WK  G Y +AEA A+EKF E  K+E FPPG+SILFT   SP SLTI+F ++GS+P+ G  VIES  LSEA+LES+IGK+GVSP AK+S+A+RLS +L
Sbjct:    4 AGVSLPKLVIGEVTFPPAAAPPGSSSSLFLAGAGERGLEIDRQFVVFTAIGVYLEDLAVSTLGPKWKGKTADDLAGNSDFFRDIFTGPFEKFTRITMVKPLSGQQYSEKVEENCVAHWKAAGTYTEAEAAAVEKFKEACKNETFPPGTSILFTHQVSPASLTITFWREGSMPETGNTVIESKALSEAILESIIGKHGVSPGAKRSVAQRLSEIL 217          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_ORYSJ (Chalcone--flavonone isomerase OS=Oryza sativa subsp. japonica GN=CHI PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.029e-68
Identity = 133/217 (61.29%), Postives = 163/217 (75.12%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGV--AVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTS 650
            +V+E++V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYLE+ A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+Y DAE  A +KF E FK   FPPG+SILFT S PG LT++FSKD S+P+  V  A IE+  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:    3 AVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_ORYSI (Chalcone--flavonone isomerase OS=Oryza sativa subsp. indica GN=CHI PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.029e-68
Identity = 133/217 (61.29%), Postives = 163/217 (75.12%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGV--AVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLNVTS 650
            +V+E++V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYLE+ A VP LA KW GK+A+EL     FFRDVVTG FEKF +VTMILPLTG QYS+KV ENC+A WK  G+Y DAE  A +KF E FK   FPPG+SILFT S PG LT++FSKD S+P+  V  A IE+  L EAVL+S+IG++GVSPAAK+S+A R+S LL   S
Sbjct:    3 AVSEVEVDGVVFPPVARPPGSGHAHFLAGAGVRGVEIAGNFIKFTAIGVYLEEGAAVPALAKKWAGKSADELAADAAFFRDVVTGDFEKFTRVTMILPLTGEQYSDKVTENCVAAWKAAGVYTDAEGAAADKFKEAFKPHSFPPGASILFTHSPPGVLTVAFSKDSSVPEGAVAAAAIENRALCEAVLDSIIGEHGVSPAAKRSIAARVSQLLKAES 219          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_HORVU (Chalcone--flavonone isomerase OS=Hordeum vulgare GN=CHI PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.137e-67
Identity = 131/211 (62.09%), Postives = 158/211 (74.88%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDA-VPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALL 638
            +V+EL+V+ V F P  +PPGS  +HFL GAG RG+EI G F+KFTAIGVYL+ DA V  LA KW GK A +L     FFRDVVTG FEKF +VTMILPLTGAQYS+KV ENC+A WK  G+Y DAEA A++KF E F    F PG+SILFT SP G LT++FSKD S+P+ G   IE+  L EAVLES+IG++GVSPAAK SLA R++ LL
Sbjct:    2 AVSELEVDGVVFPPLARPPGSAHAHFLAGAGVRGMEIGGHFIKFTAIGVYLQADAAVSALAAKWAGKPAADLASDAAFFRDVVTGEFEKFTRVTMILPLTGAQYSDKVTENCVAYWKAAGVYTDAEAAAVDKFKEAFGPHSFAPGASILFTHSPAGVLTVAFSKDSSVPESGGVAIENARLCEAVLESIIGEHGVSPAAKLSLANRVAELL 212          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI1A_SOYBN (Chalcone--flavonone isomerase 1A OS=Glycine max GN=CHI1A PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.699e-63
Identity = 122/211 (57.82%), Postives = 159/211 (75.36%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            +++ +QVE + F   V  P S K++FLGGAGERGL IEGKF+KFT IGVYLED AVP LA KWKGKT+EEL  ++ F+RD+++GPFEK ++ + ILPL GA+YS+KV ENC+A  K  G Y DAEA AIEKF E FK+  F PG+S+ + QSP G L +SFS+D +IP+   AVIE+  +S AVLE+MIG++ VSP  K+SLA RL A+L+
Sbjct:    3 TISAVQVEFLEFPAVVTSPASGKTYFLGGAGERGLTIEGKFIKFTGIGVYLEDKAVPSLAAKWKGKTSEELVHTLHFYRDIISGPFEKLIRGSKILPLAGAEYSKKVMENCVAHMKSVGTYGDAEAAAIEKFAEAFKNVNFAPGASVFYRQSPDGILGLSFSEDATIPEKEAAVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLS 213          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI_PHAVU (Chalcone--flavonone isomerase OS=Phaseolus vulgaris GN=CHI PE=2 SV=2)

HSP 1 Score: 239.965 bits (611), Expect = 8.434e-63
Identity = 120/213 (56.34%), Postives = 159/213 (74.65%), Query Frame = 3
Query:    6 SPSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            +P++T++QVE + F   V  P + K++FLGGAGERGL IEGKF+KFTAIGVYLED AV  LA KWKGK +EEL  +++F+RD+++GPFEK ++ + IL L+G +YS KV ENC+A  K  G Y DAEAK IE+F E FK   FPPG+S+ + QSP G L +SFS+D +IP +   VIE+  +S AVLE+MIG++ VSP  K+SLA RL A+LN
Sbjct:    4 APTITDVQVEFLHFPAVVTSPATAKTYFLGGAGERGLTIEGKFIKFTAIGVYLEDKAVASLATKWKGKPSEELINTLDFYRDIISGPFEKLIRGSKILQLSGTEYSRKVMENCVAHLKSVGTYGDAEAKGIEEFAEAFKKVNFPPGASVFYRQSPDGILGLSFSEDATIPGEEAVVIENKAVSAAVLETMIGEHAVSPDLKRSLASRLPAVLN 216          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI1_LOTJA (Chalcone--flavonone isomerase 1 OS=Lotus japonicus GN=CHI1 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.140e-62
Identity = 119/211 (56.40%), Postives = 156/211 (73.93%), Query Frame = 3
Query:   12 SVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQS-PGSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            S+T +QVEN+ F  SV  P + KS+FLGGAGERGL IEGKF+KFT IGVYLED AV  LA KWKGK+++EL +S++FFRD+++ P EK ++ + + PL+G +YS KV ENC+A  K  G Y +AEA AIEKF E F+   FPPGSS+ + QS  G L +SFS D +IP++   VIE+  LSEAVLE+MIG++ VSP  K+ LAERL  ++N
Sbjct:    8 SLTPIQVENLQFPASVTSPATAKSYFLGGAGERGLTIEGKFIKFTGIGVYLEDTAVDSLATKWKGKSSQELQDSLDFFRDIISSPSEKLIRGSKLRPLSGVEYSRKVMENCVAHMKSAGTYGEAEATAIEKFAEAFRKVDFPPGSSVFYRQSTDGKLGLSFSLDDTIPEEEAVVIENKALSEAVLETMIGEHAVSPDLKRCLAERLPIVMN 218          
BLAST of CF834107 vs. ExPASy Swiss-Prot
Match: CFI2_ARATH (Chalcone--flavonone isomerase 2 OS=Arabidopsis thaliana GN=CHI2 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.218e-61
Identity = 131/212 (61.79%), Postives = 153/212 (72.17%), Query Frame = 3
Query:    9 PSVTELQVENVTFTPSVQPPGSTKSHFLGGAGERGLEIEGKFVKFTAIGVYLEDDAVPLLAGKWKGKTAEELTESVEFFRDVVTGPFEKFMKVTMILPLTGAQYSEKVAENCIAIWKFFGIYADAEAKAIEKFTEVFKDEIFPPGSSILFTQSP-GSLTISFSKDGSIPKDGVAVIESNLLSEAVLESMIGKNGVSPAAKKSLAERLSALLN 641
            PSVT L V+  TF P+V+ P S K  FLGGAG        KFV  T IGVYLE  A+P ++ KWKGK A+ELTESV FFR +VTG FEK  +VTM   LTG QYSEKV ENC  I K  G Y  +EAKAI++F  VFK++ FPPGSSI+F   P GSLTI+FSK+  +PK G AVI++ LL EAVLESMIGKNGVSPA +KSLAERLS L+N
Sbjct:    4 PSVTPLHVDAFTFPPAVESPASHKRLFLGGAG--------KFVIVTVIGVYLEAMALPSISAKWKGKNAKELTESVPFFRQLVTGEFEKLARVTMKKRLTGIQYSEKVVENCEEIMKASGKYTRSEAKAIDQFLMVFKNQDFPPGSSIIFAICPKGSLTIAFSKEERVPKTGKAVIKNKLLGEAVLESMIGKNGVSPATRKSLAERLSKLMN 207          
The following BLAST results are available for this feature:
BLAST of CF834107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
CFI_TOBAC2.795e-7468.93Chalcone--flavonone isomerase OS=Nicotiana tabacum... [more]
CFI_MAIZE1.875e-7067.66Chalcone--flavonone isomerase OS=Zea mays GN=CHI P... [more]
CFI_CANGE2.073e-6961.68Chalcone--flavonone isomerase OS=Canna generalis G... [more]
CFI_ORYSJ1.029e-6861.29Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_ORYSI1.029e-6861.29Chalcone--flavonone isomerase OS=Oryza sativa subs... [more]
CFI_HORVU1.137e-6762.09Chalcone--flavonone isomerase OS=Hordeum vulgare G... [more]
CFI1A_SOYBN1.699e-6357.82Chalcone--flavonone isomerase 1A OS=Glycine max GN... [more]
CFI_PHAVU8.434e-6356.34Chalcone--flavonone isomerase OS=Phaseolus vulgari... [more]
CFI1_LOTJA7.140e-6256.40Chalcone--flavonone isomerase 1 OS=Lotus japonicus... [more]
CFI2_ARATH1.218e-6161.79Chalcone--flavonone isomerase 2 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04P01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04P01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834107 ID=CF834107; Name=CF834107; organism=Citrus sinensis; type=EST; length=658bp
AGGCCTCACCGTCCGTCACCGAACTGCAGGTCGAGAACGTCACTTTCACG
CCGTCCGTGCAACCTCCAGGATCAACAAAGTCGCATTTCCTCGGCGGCGC
AGGGGAGAGAGGATTGGAGATTGAAGGGAAGTTCGTGAAGTTCACGGCGA
TAGGAGTGTACTTGGAGGATGACGCCGTGCCGTTACTCGCCGGCAAATGG
AAGGGGAAGACTGCAGAGGAGTTGACGGAATCCGTTGAGTTCTTCAGAGA
CGTCGTCACAGGTCCCTTTGAGAAATTCATGAAGGTGACAATGATCTTGC
CATTAACTGGCGCACAATACTCAGAGAAGGTTGCCGAAAATTGCATTGCC
ATATGGAAATTTTTTGGAATTTACGCTGATGCTGAAGCCAAAGCTATTGA
AAAATTCACTGAGGTCTTCAAGGATGAAATTTTCCCACCAGGATCCTCAA
TTCTCTTTACTCAATCACCAGGATCATTGACTATCAGCTTCTCCAAAGAC
GGTTCAATACCGAAAGATGGTGTTGCGGTAATAGAGAGTAATCTGCTTTC
TGAGGCAGTACTGGAGTCGATGATCGGCAAGAATGGTGTTTCTCCTGCAG
CAAAGAAGAGTTTGGCTGAAAGACTATCAGCACTGTTGAATGTAACTAGT
GATAAGAT
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