CF834135

Overview
NameCF834135
Unique NameCF834135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF834135_ssr697 microsatellite CF834135_ssr697:697..710. BLAST: Citrus ESTs to Prunus persica proteins V1
CF834135_ssr717 microsatellite CF834135_ssr717:717..740. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALF2_CAEEL (Fructose-bisphosphate aldolase 2 OS=Caenorhabditis elegans GN=aldo-2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.525e-29
Identity = 68/121 (56.20%), Postives = 85/121 (70.25%), Query Frame = -3
Query:  336 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 692
            KAS E I   T+T L+R VP AVPGI FLSGGQSE++AT NLNA+N  Q   PW ++FSY RALQ +VLK W G+ EN  AAQK+LL R+KAN  A LGKY+ E  +  A + +FV  ++Y
Sbjct:  246 KASHEAIGLATVTALRRGVPAAVPGITFLSGGQSELDATANLNAINSVQLGKPWKLTFSYGRALQASVLKAWGGKDENIAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 8.525e-29
Identity = 66/121 (54.55%), Postives = 80/121 (66.12%), Query Frame = -3
Query:  336 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 692
            K SPE I +YT+  L+R VP AVPGI+FLSGGQSE +ATLNLNAMN+     PW +SFS+ RALQ + LKTW G+ EN   AQ   L R KANS A LGKY     +  A + + V+ Y Y
Sbjct:  237 KVSPEVIGEYTVNALRRTVPAAVPGIVFLSGGQSEEQATLNLNAMNKFDVVKPWTLSFSFGRALQQSTLKTWSGKKENVGKAQDVFLARCKANSEATLGKYGGGSGTGLASESLHVKDYKY 357          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALF_ORYSJ (Fructose-bisphosphate aldolase cytoplasmic isozyme OS=Oryza sativa subsp. japonica GN=FBA PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.240e-28
Identity = 66/123 (53.66%), Postives = 82/123 (66.67%), Query Frame = -3
Query:  336 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 695
            +K SPE IA+YT+  L+R VP AVP I+FLSGGQSE EATLNLNAMN+     PW +SFS+ RALQ + LK W G+ EN E A+ + L R KANS A LG Y  +    E A + + V+ Y Y
Sbjct:  236 KKVSPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEEEATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEATLGTYKGDAVLGEGASESLHVKDYKY 358          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.240e-28
Identity = 65/123 (52.85%), Postives = 86/123 (69.92%), Query Frame = -3
Query:  336 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 695
            +K S E IA  T+T L+R VPPAVPG+ FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G+S   A + +F+  + Y
Sbjct:  242 QKFSNEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALF_CICAR (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Cicer arietinum GN=ALDC PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.231e-27
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = -3
Query:  336 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 692
            K +PE +A++T+  L+R VP AVP ++FLSGGQSE EAT+NLNA+NQ     PW +SFS+ RALQ + LK W G+ EN + AQ +LL RAKANS A LG Y    +  E A + + V+ Y Y
Sbjct:  238 KVAPEVVAEHTVRALQRTVPAAVPAVVFLSGGQSEEEATVNLNAINQVKGKKPWTLSFSFGRALQQSTLKAWSGKEENVKNAQDALLTRAKANSEATLGTYKGNSQLGEGASESLHVKDYKY 359          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 1.231e-27
Identity = 61/121 (50.41%), Postives = 81/121 (66.94%), Query Frame = -3
Query:  336 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 692
            K SPE IA  T+T L+R VPPAVPG+ FLSGGQSE EA+LNLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  GKY   G+   A + ++V  + Y
Sbjct:  243 KYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27
Identity = 64/123 (52.03%), Postives = 85/123 (69.11%), Query Frame = -3
Query:  336 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 695
            +K S E IA  T+T L+R VPPAV G+ FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G+S   A + +F+  + Y
Sbjct:  242 QKFSNEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALDOC_MOUSE (Fructose-bisphosphate aldolase C OS=Mus musculus GN=Aldoc PE=1 SV=4)

HSP 1 Score: 122.094 bits (305), Expect = 3.582e-27
Identity = 59/121 (48.76%), Postives = 81/121 (66.94%), Query Frame = -3
Query:  336 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 692
            K SPE IA  T+T L+R VPPAVPG+ FLSGGQSE EA+LNLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  G+Y   G+   A + +++  + Y
Sbjct:  243 KYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 3.582e-27
Identity = 64/123 (52.03%), Postives = 85/123 (69.11%), Query Frame = -3
Query:  336 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESE-EAKKGMFVRGYTY 695
            +K +P+ +A  T+T L R VP AVPGI FLSGGQSE EA+LNLNAMNQ+  P PW ++FSY RALQ + L  W G+ EN +AAQ++   RA+ NSLA  G+Y   G+++  A + +F   YTY
Sbjct:  242 KKYTPQDVAVATVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CF834135 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.678e-27
Identity = 62/122 (50.82%), Postives = 82/122 (67.21%), Query Frame = -3
Query:  336 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEG-ESEEAKKGMFVRGYTY 692
            K SPE IA  T+T L+R VPPAVPG+ FLSGGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA LGKY   G +S  A + ++V  + Y
Sbjct:   16 KYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINTCPLVRPWALTFSYGRALQASALSAWRGQRDNANAATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137          
The following BLAST results are available for this feature:
BLAST of CF834135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF2_CAEEL8.525e-2956.20Fructose-bisphosphate aldolase 2 OS=Caenorhabditis... [more]
ALF1_PEA8.525e-2954.55Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ORYSJ3.240e-2853.66Fructose-bisphosphate aldolase cytoplasmic isozyme... [more]
ALDOA_RAT3.240e-2852.85Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALF_CICAR1.231e-2751.64Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALDOC_RAT1.231e-2750.41Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALDOA_MOUSE2.742e-2752.03Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOC_MOUSE3.582e-2748.76Fructose-bisphosphate aldolase C OS=Mus musculus G... [more]
ALDOB_CHICK3.582e-2752.03Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALDOC_CHICK4.678e-2750.82Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04P21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834135 ID=CF834135; Name=CF834135; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTTTTTTTAAAAAAAAAAAAGTAGAACTCATAATCCCGAGT
ACAGTAGCATAAAAACATAGAAATACAATGATTCTTGTTTAACTAGTACC
CCTTTCGCTGGGCTACAGTTTGTAAAATCTTTTCTTATCTCACAGGTTTT
ATTCAAGCTCTCTATTTATTAGGTGGATAAAAGAAAATGAAAAAACTTCT
AATAGAAATCTTGTCCGTATCCCAAAAAAATTTTAAAAAAAAGGGAAGGA
ACCAAAACAAAAGCAAGTGCACAATGACACAAGTGTCATGAGTTGCCTCA
GGCAAGCTCAAACTGCATAGTATATTATTGGCTTAGTAAGTGTAGCCCCT
GACAAACATTCCTTTCTTGGCTTCCTCGCTTTCACCTTCTGCGGAATACT
TCCCAAGCTGCGCCAAGGAATTTGCCTTTGCACGCACCAATAGTGACTTT
TGTGCAGCTTCAGTATTCTCAGGACGACCTTGCCATGTCTTAAGAACAGT
GTTCTGAAGCGCCCGGGCATAAGAAAAGGACACGTGCCAGGGGTTGGGGG
CTTGGTTCATCGCATTCAAGTTCAATGTTGCTTCCACTTCTGATTGTCCT
CCAGACAAAAACATGATTCCTGGGACTGCAGGGGGTACTCTCCTCTTGAG
CATTGTAAGTGTATATTTAGCAATGGTCTCTGGAGAGGCCTTCTCCGAGA
GAGAGAGAGAGTCTAAAATAATAATAATAATAATAATAATAAGCCGCCTC
CTCAGATCTCTTGAGAGTCAACGTAATAAAAGTTGCCAAACAATGCTGT
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