CF834136

Overview
NameCF834136
Unique NameCF834136
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF834136_ssr169 microsatellite CF834136_ssr169:169..182. BLAST: Citrus ESTs to Prunus persica proteins V1
CF834136_ssr138 microsatellite CF834136_ssr138:138..161. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 2
Query:  188 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 544
            K +PE IA  T+T L+R VPPAVPG+ FLSGGQSE EA+ NLNA+N+   P PW ++FSY RALQ + L  W+G+ +N EAA +  + RA+ N LA  GKY   GE    A + +++  + Y
Sbjct:  243 KYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 1.148e-26
Identity = 64/123 (52.03%), Postives = 84/123 (68.29%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 544
            +K S E I   T+T L+R VPPAV GI FLSGGQSE EA++NLNA+N+ P   PW ++FSY RALQ + LK W G+ EN +AAQ+  + RA ANSLA  GKY+  G++   A + +FV  + Y
Sbjct:  242 QKFSHEEIVMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALF_MAIZE (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 62/122 (50.82%), Postives = 82/122 (67.21%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 544
            +K +PE IA+YT+  L+R VP AVP ++FLSGGQSE EAT NLNAMN+     PW +SFS+ RALQ + LK W G+ EN E A+ + L R KANS A LG Y  +G++    + + V+ Y Y
Sbjct:  236 KKVTPEVIAEYTVRTLQRTVPAAVPAVLFLSGGQSEEEATRNLNAMNKLSTKKPWSLSFSFGRALQASTLKAWAGKVENLEKARAAFLARCKANSEATLGTY--KGDAAADTESLHVKDYKY 355          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 60/122 (49.18%), Postives = 82/122 (67.21%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 544
            +K S E  A+ T+  L+R VP AVPG++FLSGGQSE++AT NLNA+N+ P   PW +SFS+ RALQ + +  WQG+PEN +A Q   L  AKAN  A LGK+  E ++   +K +FV  + Y
Sbjct:  242 KKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.958e-26
Identity = 61/118 (51.69%), Postives = 79/118 (66.95%), Query Frame = 2
Query:  197 PETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 544
            PE +A  TLT L+R VPPAVPGI FLSGGQSE +A+++LNA+N+     PW ++FSY RALQ +VLK W G+ EN +AAQ  L+ RAK N  A  G+Y   G    A + +FV  + Y
Sbjct:  246 PEQVAMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 2.558e-26
Identity = 60/122 (49.18%), Postives = 81/122 (66.39%), Query Frame = 2
Query:  188 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 544
            K +PE IA  T+T L+R VPPAVPG+ FLSGGQSE EA+LNLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  GKY   GE    A + +++  + Y
Sbjct:  243 KYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.363e-26
Identity = 63/123 (51.22%), Postives = 84/123 (68.29%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAPN--PWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESE-EAKKGMFVRGYTY 544
            EK S   I   T+T L+R VP AVPG++FLSGGQSE +ATLNLNA+NQ     PW ++FSY RALQ + L  W G+ EN  AAQ+ LL RA+ NSLA +GKY+ +  ++  A + +FV  ++Y
Sbjct:  244 EKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQVSGKKPWALTFSYGRALQASCLAKWAGKDENIAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOB_SHEEP (Fructose-bisphosphate aldolase B OS=Ovis aries GN=ALDOB PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.698e-26
Identity = 63/123 (51.22%), Postives = 80/123 (65.04%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 544
            +K +PE +A  T+T L R VP AVPGI FLSGG SE +ATLNLNA+N    P PW +SFSY RALQ + L  W G+ EN +A Q++ + RA ANS A  G+Y   G S+ A  + +F   YTY
Sbjct:  242 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRALANSQAAKGQYVHMGSSDSASTQSLFTASYTY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.442e-26
Identity = 59/122 (48.36%), Postives = 80/122 (65.57%), Query Frame = 2
Query:  188 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGE-SEEAKKGMFVRGYTY 544
            K +PE IA  T+T L+R VPPAVPG+ FLSGGQSE EA+ NLNA+N+   P PW ++FSY RALQ + L  W+G+ +N  AA +  + RA+ N LA  GKY   GE    A + +++  + Y
Sbjct:  243 KYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 58/121 (47.93%), Postives = 82/121 (67.77%), Query Frame = 2
Query:  188 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 544
            K   E +A+YT+  L R +PPA+PG+ FLSGG SEV A+  LNAMN  P   PW ++FSYARALQ++ +K W G+    EA +++ + RAK NSLAQLGKY+   + ++  + ++V G TY
Sbjct:  253 KGHAEQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKYN-RADDDKDSQSLYVAGNTY 372          
The following BLAST results are available for this feature:
BLAST of CF834136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOC_PANTR1.148e-2649.18Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOA_PONAB1.148e-2652.03Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALF_MAIZE1.958e-2650.82Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF_ECHMU1.958e-2649.18Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALF1_LAMJA1.958e-2651.69Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_MACFA2.558e-2649.18Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALF1_CAEEL4.363e-2651.22Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALDOB_SHEEP5.698e-2651.22Fructose-bisphosphate aldolase B OS=Ovis aries GN=... [more]
ALDOC_HUMAN7.442e-2648.36Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALF_TRYBB1.269e-2547.93Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04P21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834136 ID=CF834136; Name=CF834136; organism=Citrus sinensis; type=EST; length=723bp
CAGAGAAGAAAATTCTCTCACTTTGAAATCCCCATCTTCCCATTTATTTT
TCCGCCACTTTCTCGGGAAAAATCGCTGTTACAGCATTGTTTGGCAACTT
TTATTACGTTGACTCTCAAGAGATCTGAGGAGGCGGCTTATTATTATTAT
TATTATTATTATTTTAGACTCTCTCTCTCTCTCGGAGAAGGCCTCTCCAG
AGACCATTGCTAAATATACACTTACAATGCTCAAGAGGAGAGTACCCCCT
GCAGTCCCAGGAATCATGTTTTTGTCTGGAGGACAATCAGAAGTGGAAGC
AACATTGAACTTGAATGCGATGAACCAAGCCCCCAACCCCTGGCACGTGT
CCTTTTCTTATGCCCGGGCGCTTCAGAACACTGTTCTTAAGACATGGCAA
GGTCGTCCTGAGAATACTGAAGCTGCACAAAAGTCACTATTGGTGCGTGC
AAAGGCAAATTCCTTGGCGCAGCTTGGGAAGTATTCCGCAGAAGGTGAAA
GCGAGGAAGCCAAGAAAGGAATGTTTGTCAGGGGCTACACTTACTAAGCC
AATAATATACTATGCAGTTTGAGCTTGCCTGAGGCAACTCATGACACTTG
TGTCATTGTGCACTTGCTTTTGTTTTGGTTCCTTCCCTTTTTTTTAAAAT
TTTTTTGGGATACGGACAAGATTTCTATTAGAAGTTTTTTCATTTTCTTT
TATCCACCTAATAAATAGAGAGC
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