CF834136

Overview
NameCF834136
Unique NameCF834136
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF834136_ssr169 microsatellite CF834136_ssr169:169..182. BLAST: Citrus ESTs to Prunus persica proteins V1
CF834136_ssr138 microsatellite CF834136_ssr138:138..161. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOB_SPAAU (Fructose-bisphosphate aldolase B OS=Sparus aurata GN=aldob PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 57/123 (46.34%), Postives = 82/123 (66.67%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEA-KKGMFVRGYTY 544
            +K +P+ +A  T+T L+R VP +VPGI FLSGGQSE EA+++LNA+NQ P   PW ++FSY RALQ + L  WQG+  N  A Q+  + RAK N LA  G+Y   G +++A ++ ++   Y Y
Sbjct:  242 KKFTPQEVAMATVTALRRTVPASVPGICFLSGGQSEEEASIHLNAINQVPLHRPWKLTFSYGRALQASALAAWQGKDANKAATQQVFVTRAKINGLASKGEYKPSGSADQASQQSLYTASYVY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOC_CARAU (Fructose-bisphosphate aldolase C OS=Carassius auratus GN=aldoc PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.658e-25
Identity = 60/121 (49.59%), Postives = 79/121 (65.29%), Query Frame = 2
Query:  188 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 544
            K S + IA  T+T L+R VPPAV G+ FLSGGQSE EA++NLNA+N  P   PW ++FSY RALQ + L  W+G  EN +AA +  L RA+AN LA  GKY + G    A + ++V  + Y
Sbjct:  243 KFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.828e-25
Identity = 59/119 (49.58%), Postives = 79/119 (66.39%), Query Frame = 2
Query:  194 SPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQ--APNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 544
            +P+  A  T+  L+R VPPAVPGI FLSGGQSE++AT NLN +N+   P PW ++FS+ RALQ +VL TW+G+ EN  AAQ+ LL  AKAN  A +GK+     +    K +FV  + Y
Sbjct:  245 TPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.824e-25
Identity = 62/123 (50.41%), Postives = 78/123 (63.41%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 544
            +K +PE +A  T+T L R VP AVPGI FLSGG SE +ATLNLNA+N    P PW +SFSY RALQ + L  W G+ EN +  Q++ + RA ANS A  G+Y   G S  A  + +F   YTY
Sbjct:  242 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDCB_DANRE (Fructose-bisphosphate aldolase C-B OS=Danio rerio GN=aldocb PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.228e-25
Identity = 58/121 (47.93%), Postives = 78/121 (64.46%), Query Frame = 2
Query:  188 KASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 544
            K S E IA  T+T L+R VPPAV G+ FLSGGQSE EA++NLN++N  P   PW ++FSY RALQ + L  W+G   N +AA +  + RA+AN LA  GKY + G    A + ++V  + Y
Sbjct:  243 KYSSEEIAMATVTALRRTVPPAVSGVTFLSGGQSEEEASVNLNSINNCPLAKPWPLTFSYGRALQASALSAWRGAKSNEKAATEEFIKRAEANGLAAQGKYVSSGTCGAAGQSLYVANHAY 363          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOB_MOUSE (Fructose-bisphosphate aldolase B OS=Mus musculus GN=Aldob PE=1 SV=3)

HSP 1 Score: 113.62 bits (283), Expect = 1.075e-24
Identity = 61/123 (49.59%), Postives = 78/123 (63.41%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQA--PNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGES-EEAKKGMFVRGYTY 544
            +K +PE +A  T+T L R VP AVPGI FLSGG SE +ATLNLNA+N+   P PW +SFSY RALQ + L  W G+  N +A Q++ + RA AN  A  G+Y   G S   A + +F   YTY
Sbjct:  242 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINRCPLPRPWKLSFSYGRALQASALAAWGGKAANKKATQEAFMKRAMANCQAAQGQYVHTGSSGAAATQSLFTASYTY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 62/122 (50.82%), Postives = 78/122 (63.93%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQAP--NPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAKKGMFVRGYTY 544
            +K +PE IA  T+  L+R VP AV G+ FLSGGQSE EAT+NL+A+N  P   PW ++FSY RALQ +VL+ W G+ EN  A Q  LL RAKAN  A  GKY A G +      +FV  + Y
Sbjct:  241 KKNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAINNVPLIRPWALTFSYGRALQASVLRAWAGKKENIAAGQNELLKRAKANGDAAQGKYVA-GSAGAGSGSLFVANHAY 361          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOB_RABIT (Fructose-bisphosphate aldolase B OS=Oryctolagus cuniculus GN=ALDOB PE=1 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 1.833e-24
Identity = 61/123 (49.59%), Postives = 77/123 (62.60%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 544
            +K +PE +A  T+T L R VP AVPGI FLSGG SE +ATLNLNA+N    P PW +SFSY RALQ + L  W G+ EN +A Q++ + RA  N  A  G+Y   G S  A  + +F   YTY
Sbjct:  242 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKATQEAFMKRAVVNCQAAKGQYVHTGSSGAASTQSLFTASYTY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOB_HUMAN (Fructose-bisphosphate aldolase B OS=Homo sapiens GN=ALDOB PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.833e-24
Identity = 62/123 (50.41%), Postives = 77/123 (62.60%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 544
            +K +PE +A  T+T L R VP AVPGI FLSGG SE +ATLNLNA+N    P PW +SFSY RALQ + L  W G+  N EA Q++ + RA AN  A  G+Y   G S  A  + +F   YTY
Sbjct:  242 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAMANCQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
BLAST of CF834136 vs. ExPASy Swiss-Prot
Match: ALDOB_PONAB (Fructose-bisphosphate aldolase B OS=Pongo abelii GN=ALDOB PE=2 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.394e-24
Identity = 62/123 (50.41%), Postives = 77/123 (62.60%), Query Frame = 2
Query:  185 EKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMN--QAPNPWHVSFSYARALQNTVLKTWQGRPENTEAAQKSLLVRAKANSLAQLGKYSAEGESEEAK-KGMFVRGYTY 544
            +K +PE +A  T+T L R VP AVPGI FLSGG SE +ATLNLNA+N    P PW +SFSY RALQ + L  W G+  N EA Q++ + RA AN  A  G+Y   G S  A  + +F   YTY
Sbjct:  242 KKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAANKEATQEAFMKRAVANHQAAKGQYVHTGSSGAASTQSLFTACYTY 364          
The following BLAST results are available for this feature:
BLAST of CF834136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOB_SPAAU1.269e-2546.34Fructose-bisphosphate aldolase B OS=Sparus aurata ... [more]
ALDOC_CARAU1.658e-2549.59Fructose-bisphosphate aldolase C OS=Carassius aura... [more]
ALF_SCHMA2.828e-2549.58Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]
ALDOB_BOVIN4.824e-2550.41Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALDCB_DANRE8.228e-2547.93Fructose-bisphosphate aldolase C-B OS=Danio rerio ... [more]
ALDOB_MOUSE1.075e-2449.59Fructose-bisphosphate aldolase B OS=Mus musculus G... [more]
ALF_DROME1.403e-2450.82Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALDOB_RABIT1.833e-2449.59Fructose-bisphosphate aldolase B OS=Oryctolagus cu... [more]
ALDOB_HUMAN1.833e-2450.41Fructose-bisphosphate aldolase B OS=Homo sapiens G... [more]
ALDOB_PONAB2.394e-2450.41Fructose-bisphosphate aldolase B OS=Pongo abelii G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_04P21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa04P21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834136 ID=CF834136; Name=CF834136; organism=Citrus sinensis; type=EST; length=723bp
CAGAGAAGAAAATTCTCTCACTTTGAAATCCCCATCTTCCCATTTATTTT
TCCGCCACTTTCTCGGGAAAAATCGCTGTTACAGCATTGTTTGGCAACTT
TTATTACGTTGACTCTCAAGAGATCTGAGGAGGCGGCTTATTATTATTAT
TATTATTATTATTTTAGACTCTCTCTCTCTCTCGGAGAAGGCCTCTCCAG
AGACCATTGCTAAATATACACTTACAATGCTCAAGAGGAGAGTACCCCCT
GCAGTCCCAGGAATCATGTTTTTGTCTGGAGGACAATCAGAAGTGGAAGC
AACATTGAACTTGAATGCGATGAACCAAGCCCCCAACCCCTGGCACGTGT
CCTTTTCTTATGCCCGGGCGCTTCAGAACACTGTTCTTAAGACATGGCAA
GGTCGTCCTGAGAATACTGAAGCTGCACAAAAGTCACTATTGGTGCGTGC
AAAGGCAAATTCCTTGGCGCAGCTTGGGAAGTATTCCGCAGAAGGTGAAA
GCGAGGAAGCCAAGAAAGGAATGTTTGTCAGGGGCTACACTTACTAAGCC
AATAATATACTATGCAGTTTGAGCTTGCCTGAGGCAACTCATGACACTTG
TGTCATTGTGCACTTGCTTTTGTTTTGGTTCCTTCCCTTTTTTTTAAAAT
TTTTTTGGGATACGGACAAGATTTCTATTAGAAGTTTTTTCATTTTCTTT
TATCCACCTAATAAATAGAGAGC
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