CF834140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE_ERWAM (UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.179e-14 Identity = 47/130 (36.15%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 MS+LVTG AG++G+H L+L +RGD VV LDN +N S+ + K L EGD+ D L +F A + V+H A V + + P Y +N+ G + LLE +SA +++SS++V Sbjct: 1 MSILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRVEK--LTGKTATFFEGDLLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVN-QFIFSSSATV 127
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE3_ARATH (UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.450e-13 Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 2 Query: 404 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARK-ALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 SVLVTG AG++G+H L L + G V +DN++N SL++ +K A N + + + D+ D L K+F F V+H A V +++ P Y ++NI G VTLLE + ++V++SS++V Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDLRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCK-NLVFSSSATV 132
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE_YEREN (UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.883e-12 Identity = 44/130 (33.85%), Postives = 69/130 (53.08%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 MS+L+TG AG++G+H L L ++G VV LDN N SL + K + GDI D L +F + V+H A V +++ P Y +N+ G +TLLE AN + ++++SS++V Sbjct: 1 MSILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKICGRKPNFY--HGDILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVK-KLIFSSSATV 127
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE_HAEIN (UDP-glucose 4-epimerase OS=Haemophilus influenzae GN=galE PE=3 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 4.194e-12 Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M++LVTG AG++G+H + L G VV LDN N SL++ ++ + EGDI D LL K+F V+H A V ++Q P Y +N+AG + L++ K A + V++SS++V Sbjct: 1 MAILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCNSSPKSLERVKQITGKEAKFY--EGDILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAGVW-NFVFSSSATV 127
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE1_PEA (UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 42/135 (31.11%), Postives = 72/135 (53.33%), Query Frame = 2 Query: 392 SGGMSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNN--HGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 + +LVTG+AGF+GTH + L G V +DNF+N ++++ R+ + +N + GD+ + L KLF F V+H A V +++NP Y +N+ G + L E N + +V++SS++V Sbjct: 3 ASSQKILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTLGDLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCK-KMVFSSSATV 136
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE_PASHA (UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11 Identity = 40/130 (30.77%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M++LVTG AG++G+H + L +V LDN +N + SL++ ++ + + +GDI D +L K+F V+H A V +N + + +N+ G + L+E AN +IV++SS++V Sbjct: 1 MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQ--ITGKSVKFYQGDILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVN-TIVFSSSATV 127
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE2_ARATH (UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11 Identity = 44/131 (33.59%), Postives = 74/131 (56.49%), Query Frame = 2 Query: 404 SVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHG--IFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 +VLV+G AG++G+H L L G VV +DN +N SL++ +K L HG + + D+ D L K+F F V+H A V +++ P Y ++N+ G +TLLE + + ++V++SS++V Sbjct: 5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKK-LAAEHGERLSFHQVDLRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEV-MAQHGCKNLVFSSSATV 133
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GAL10_YEAST (Bifunctional protein GAL10 OS=Saccharomyces cerevisiae GN=GAL10 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.081e-11 Identity = 48/128 (37.50%), Postives = 66/128 (51.56%), Query Frame = 2 Query: 407 VLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 VLVTG AG++G+H + L + G V DN +N S+ AR +L H I E D+ D K L K+F V+H A V + Q P Y H+NI G V LLE + N V++SS++V Sbjct: 14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV--ARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS-KFVFSSSATV 138
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE_PASMU (UDP-glucose 4-epimerase OS=Pasteurella multocida GN=galE PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.718e-11 Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M++LVTG AG++G+H + L VV LDN N SL+ R A + + +GDI D LL K+F V+H A V ++Q P Y +N+ G + L++ K A + V++SS++V Sbjct: 1 MAILVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLE--RVAQITGKQVKFYQGDILDTALLQKIFAENQIQSVIHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVW-NFVFSSSATV 127
BLAST of CF834140 vs. ExPASy Swiss-Prot
Match: GALE_ECOLI (UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 401 MSVLVTGAAGFVGTHVSLALKKRGDGVVGLDNFNNYYDPSLKKARKALLNNHGIFVIEGDINDAKLLAKLFDAVAFTHVMHLAAQAGVRYAMQNPHSYVHSNIAGLVTLLEACKSANPQPSIVWASSSSV 790 M VLVTG +G++G+H + L + G V+ LDN N S+ + L H FV EGDI + L+ ++ A V+H A V ++Q P Y +N+ G + L+ A ++AN + + +++SS++V Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNS-KRSVLPVIERLGGKHPTFV-EGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NFIFSSSATV 127 The following BLAST results are available for this feature:
BLAST of CF834140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834140 ID=CF834140; Name=CF834140; organism=Citrus sinensis; type=EST; length=792bpback to top |