CF834146

Overview
NameCF834146
Unique NameCF834146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length628
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834146 vs. ExPASy Swiss-Prot
Match: ATPO_CALMO (ATP synthase subunit O, mitochondrial OS=Callicebus moloch GN=ATP5O PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.321e-14
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 3
Query:  138 FSTSSVQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTS 527
            FSTS V+   K V+ P+ ++G  G YA+ALY AA K   LE+VE E+L + +  K+            V    +VK++++I  + +FS +T + + +LAENGRL N   +   F  +   H+GE+  TVT+
Sbjct:   16 FSTSVVRPFAKLVRPPVQVYGIEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPKVAASVLNPY-VKHSVKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEIPCTVTT 145          
BLAST of CF834146 vs. ExPASy Swiss-Prot
Match: ATPO_CALJA (ATP synthase subunit O, mitochondrial OS=Callithrix jacchus GN=ATP5O PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.943e-14
Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  138 FSTSSVQKEQK-VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTS 527
            F TS V+   K V+ P+ ++G  G YA+ALY AA K   LE+VE E+L + +  K+            V    +VK++++I  + +FS +T + + +LAENGRL N   +   F  +   H+GEV  TVT+
Sbjct:   16 FGTSVVRPFAKLVRPPVQVYGVEGRYATALYSAASKQKKLEQVEKELLRVAQILKEPKVAASVLNPY-VKHSIKVKSLSDIIAKERFSPLTTNLINLLAENGRLSNTQGVVSAFSTMMSVHRGEVPCTVTT 145          
BLAST of CF834146 vs. ExPASy Swiss-Prot
Match: ATPO_DROME (ATP synthase subunit O, mitochondrial OS=Drosophila melanogaster GN=Oscp PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 9.468e-13
Identity = 40/127 (31.50%), Postives = 67/127 (52.76%), Query Frame = 3
Query:  147 SSVQKEQKVKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTS 527
            SS   +  VK P+ +FG  G YA+ALY AA K + L++VE ++  L    +      ++     +  +    A+ E   + +F+  T + L +LA+NGRL+ LDT+   +  +  AH+GEV   V +
Sbjct:   15 SSAAAQATVKPPVQVFGLEGRYATALYSAASKLSQLDQVEKDLTALQATIRSDKKLREYVTSPIINKKVMATALKEASEKLRFAPATVNLLGLLADNGRLKKLDTVINAYKTIMAAHRGEVVCEVVT 141          
BLAST of CF834146 vs. ExPASy Swiss-Prot
Match: ATPO_NEUCR (ATP synthase subunit 5, mitochondrial OS=Neurospora crassa GN=atp-5 PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12
Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 3
Query:  168 KVKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVT-KHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTS 527
            KVK P+ LFG  G YA+ALY AAVKT+ALE     I  L     K        +  ++    +   + E+      S+ T K+FL  LAEN RL  L ++  +F EL  A +GEV++ VTS
Sbjct:   30 KVKPPVTLFGLDGTYATALYTAAVKTSALEPTAKAISSLGNLLAKDPKLASILETPTLSPADKSAIVAELQKSVGVSNETVKNFLATLAENNRLGLLPSVVAKFSELMSAARGEVEMVVTS 150          
BLAST of CF834146 vs. ExPASy Swiss-Prot
Match: ATPO_KLULA (ATP synthase subunit 5, mitochondrial OS=Kluyveromyces lactis GN=ATP5 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.195e-11
Identity = 41/119 (34.45%), Postives = 64/119 (53.78%), Query Frame = 3
Query:  171 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSDVTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTS 527
            VK P+ LFG  G YA+AL+ AA KT ++E   S +  L E   K        ++ ++ AE R   ++ +  +       ++ L VLAEN RL  L+ +  +F +LT A+ G V+ TVT+
Sbjct:   18 VKPPVQLFGLDGTYATALFTAASKTTSVEAAASSLNALKETVAKDTKLTSILENPALSAEDRNIVVDTLSKKINLDQSVQNLLKVLAENNRLSLLEHVTSQFSKLTDAYHGLVQATVTT 136          
BLAST of CF834146 vs. ExPASy Swiss-Prot
Match: ATPO_ASHGO (ATP synthase subunit 5, mitochondrial OS=Ashbya gossypii GN=ATP5 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 6.785e-11
Identity = 42/120 (35.00%), Postives = 61/120 (50.83%), Query Frame = 3
Query:  171 VKVPLALFGGSGNYASALYIAAVKTNALEKVESEILDLVEASKKADTYFQFTKDLSVPAETRVKAINEICTQAKFSD-VTKHFLVVLAENGRLRNLDTIAKRFVELTMAHKGEVKVTVTS 527
            VK P+ LFG  G YASAL+ AA KT ++E     +  L +   K         + ++PA  R   +  +  +    D   ++ + VLAEN RL  L  +A  F +LT AH G V+ TVT+
Sbjct:   18 VKPPIQLFGLEGTYASALFTAASKTTSIESAGKALASLSKTIAKDAKLGAILANPALPAGDRTVVVQTLAQKTPGMDAAVQNLMQVLAENNRLNLLQGVAGEFTKLTDAHNGLVQATVTT 137          
The following BLAST results are available for this feature:
BLAST of CF834146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
ATPO_CALMO1.321e-1435.88ATP synthase subunit O, mitochondrial OS=Callicebu... [more]
ATPO_CALJA2.943e-1435.88ATP synthase subunit O, mitochondrial OS=Callithri... [more]
ATPO_DROME9.468e-1331.50ATP synthase subunit O, mitochondrial OS=Drosophil... [more]
ATPO_NEUCR2.755e-1238.84ATP synthase subunit 5, mitochondrial OS=Neurospor... [more]
ATPO_KLULA5.195e-1134.45ATP synthase subunit 5, mitochondrial OS=Kluyverom... [more]
ATPO_ASHGO6.785e-1135.00ATP synthase subunit 5, mitochondrial OS=Ashbya go... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05A07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834146 ID=CF834146; Name=CF834146; organism=Citrus sinensis; type=EST; length=628bp
CTGAACTGGGCCTATTAAGGTTTTTAATTTAGGAAATGGCAACGGTAAGT
CCTATCAGATCGAGCCTCTCTGTATTCAACAAGATTCTCAGATCCAATTC
TCAGCTATCCCCTCCTCATCCACAGTTATCGAAAGGTTTTTCCACTTCGT
CGGTGCAGAAGGAGCAGAAAGTTAAGGTGCCTCTGGCTTTGTTTGGAGGT
TCAGGAAATTATGCCTCTGCTCTGTACATTGCCGCAGTGAAAACTAACGC
ACTGGAGAAGGTTGAGTCTGAGATTCTTGACCTTGTCGAGGCTTCAAAGA
AGGCTGATACATATTTTCAGTTCACAAAGGACTTGTCTGTGCCTGCAGAG
ACAAGAGTTAAGGCCATTAACGAAATCTGTACTCAGGCTAAATTTTCAGA
TGTTACGAAGCACTTCTTAGTTGTTTTGGCTGAGAATGGGAGGCTTAGAA
ACTTAGACACCATCGCTAAGAGGTTTGTGGAGTTAACCATGGCACACAAG
GGCGAAGTAAAAGTTACTGTTACATCCGTTATTCCACTTCCCCCAGAAGA
AGAGAGAGAGTTGAAAGAGACACTGCAAGAGACACTTGGCCAAGGGAAGA
AAGTCAAGGTTGAACAGAAGGTTGATCC
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