CF834174

Overview
NameCF834174
Unique NameCF834174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 1.314e-22
Identity = 64/147 (43.54%), Postives = 88/147 (59.86%), Query Frame = -2
Query:  296 SRAITQYIAQEFPDKGTQLTCPGKPI---APLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKK--LFDARPHVSAWAADITSRPAWAKVLA 721
            SRAI +YIA+++  +G  L   GK I     +  W +VEA  + PP   L   +V+ P+ G   D   ++E+E KLA++LDVYEA+LS+++YLA D   L DL HLP    L+G P+ K  L   R HVSAW   I+SR AW +V A
Sbjct:   66 SRAIMRYIAEKYRSQGPDLL--GKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVG-PIGKAHLIKDRKHVSAWWDKISSRAAWKEVSA 209          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.112e-21
Identity = 59/147 (40.14%), Postives = 86/147 (58.50%), Query Frame = -2
Query:  290 SRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKP-MFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALL 721
            SRAI +YI +++  +   L   G  +  A + VW EVE  Q++   S + +E +  P M G+ T+   V+E+  KL K+L+VYEARLSQS YLA D     DL+H P     +GTP   LFD+ PHV AW   + +RP+  K+ A++
Sbjct:   68 SRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVKKLAAVM 214          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF1_MAIZE (Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE=1 SV=4)

HSP 1 Score: 102.064 bits (253), Expect = 3.236e-21
Identity = 61/147 (41.50%), Postives = 86/147 (58.50%), Query Frame = -2
Query:  287 SRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 721
            SRAI +Y A++      +L   G  +  A + VW EVEA Q+    + + ++++  PM G TTD   V+EN  KL K+L+VYEARL++ KYLA D   L DL+H+     L  TP   + DA PHV AW + +  RP+  KV AL+K
Sbjct:   68 SRAICKYAARK---NKPELLREGNLEEAAMVDVWIEVEANQYTAALNPILFQVLISPMLGGTTDQKVVDENLEKLKKVLEVYEARLTKCKYLAGDFLSLADLNHVSVTLCLFATPYASVLDAYPHVKAWWSGLMERPSVQKVAALMK 211          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF2_ORYSJ (Probable glutathione S-transferase GSTF2 OS=Oryza sativa subsp. japonica GN=GSTF2 PE=1 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = -2
Query:  287 SRAITQYIAQEFPDKGTQLTCPG--KPIAPLLVWKEVEALQFDPPSSKLNWELVYKPM-FGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKVLALLK 721
            SRAI +Y+ ++      +L   G  K  A + VW EVE+ Q+ P  + + ++ + +PM FG   D   VEEN  KL K+L+VYEARL++ KYLA D   + DL H+     L  TP   + DA PHV AW  D+ +RP+  KV +L+K
Sbjct:   68 SRAICKYVCRK---NKPELLKDGDLKESAMVDVWLEVESNQYTPALNPILFQCLIRPMMFGAPPDEKVVEENLEKLKKVLEVYEARLTKCKYLAGDYISVADLSHVAGTVCLGATPHASVLDAYPHVKAWWTDLMARPSSQKVASLMK 212          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.969e-20
Identity = 57/147 (38.78%), Postives = 84/147 (57.14%), Query Frame = -2
Query:  293 SRAITQYIAQEFPDKGTQL---TCPGKPIAPLLVWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLG-TPVKKLFDARPHVSAWAADITSRPAWAKVLAL 721
            SRAI +Y A ++ D+GT L   T  G+ I     W EVE   F   +  L   +V+KP  G   D A VEE + K  K+LDVYE RL+ ++YL  D F L DL H+P +  ++  T +  L  +R +++ W  +I++RPAW K++ L
Sbjct:   67 SRAIARYYATKYADQGTDLLGKTLEGRAIVDQ--WVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF4_MAIZE (Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE=1 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17
Identity = 49/110 (44.55%), Postives = 62/110 (56.36%), Query Frame = -2
Query:  302 VWKEVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 631
            VW EVEA Q  PP+  +  E V+ P  G   + A V+EN  KL K+L+VYEARL+   YLA D   L DL     ++ L+ T    L  A PHVSAW   + +RPA  KV
Sbjct:   99 VWLEVEAHQLSPPAIAIVVECVFAPFLGRERNQAVVDENVEKLKKVLEVYEARLATCTYLAGDFLSLADLSPFTIMHCLMATEYAALVHALPHVSAWWQGLAARPAANKV 208          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF2_WHEAT (Glutathione S-transferase 2 OS=Triticum aestivum GN=GSTA2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.118e-16
Identity = 54/148 (36.49%), Postives = 77/148 (52.03%), Query Frame = -2
Query:  302 SRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 721
            SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS    DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   68 SRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSISFADLNHIPFTFYFMTTPYAKVFDEYPKVKAWWEMLMARPAVQRV 215          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF1_WHEAT (Glutathione S-transferase 1 OS=Triticum aestivum GN=GSTA1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.191e-15
Identity = 54/148 (36.49%), Postives = 77/148 (52.03%), Query Frame = -2
Query:  302 SRAITQYIAQEFPDK-GTQLTCPGKPIAPLL---VWKEVEALQFDPPSSKLNWELVYKPMF----GMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAADITSRPAWAKV 721
            SRAI +YI +++    G  L      I  L    VW EVEA Q+ P  S + +E +  P      G   +   V+E+  +L  +L +YEARL +S+YLA DS    DL+H+P     + TP  K+FD  P V AW   + +RPA  +V
Sbjct:   68 SRAIAKYILRKYGGTAGLDLLGENSGIEELAMVDVWTEVEAQQYYPAISPVVFECIIIPFIIPGGGAAPNQTVVDESLERLRGVLGIYEARLEKSRYLAGDSITFADLNHIPFTFYFMTTPYAKVFDDYPKVKAWWEMLMARPAVQRV 215          
BLAST of CF834174 vs. ExPASy Swiss-Prot
Match: GSTF5_ARATH (Glutathione S-transferase PM239X14 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12
Identity = 47/131 (35.88%), Postives = 69/131 (52.67%), Query Frame = -2
Query:  335 SRAITQYIAQEFPDKGTQLTCPGKPIAPLLVWK--EVEALQFDPPSSKLNWELVYKPMFGMTTDPAAVEENEAKLAKILDVYEARLSQSKYLACDSFPLVDLHHLPNINLLLGTPVKKLFDARPHVSAWAA 721
            SRAI++Y+  ++    + L  P  P A  L  +   VE   FDPP+S L +E V+  M G+ T+    ++    L   +D YE  LS+ KYLA + F L DL HLP    ++      + D++PHV AW A
Sbjct:   70 SRAISRYLVAKYGKGSSLLPSPSDPKAYGLFEQAASVEYSSFDPPASSLAYERVFAGMRGLKTNEELAKKYVDTLNAKMDGYERILSKQKYLAGNDFTLADLFHLP-YGAMVAQLEPTVLDSKPHVKAWWA 199          
The following BLAST results are available for this feature:
BLAST of CF834174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
GSTF3_ARATH1.314e-2243.54Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF1_ORYSJ1.112e-2140.14Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF1_MAIZE3.236e-2141.50Glutathione S-transferase 1 OS=Zea mays GN=GST1 PE... [more]
GSTF2_ORYSJ2.739e-2040.54Probable glutathione S-transferase GSTF2 OS=Oryza ... [more]
GSTF7_ARATH7.969e-2038.78Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF4_MAIZE3.702e-1744.55Glutathione S-transferase 4 OS=Zea mays GN=GST4 PE... [more]
GSTF2_WHEAT9.118e-1636.49Glutathione S-transferase 2 OS=Triticum aestivum G... [more]
GSTF1_WHEAT1.191e-1536.49Glutathione S-transferase 1 OS=Triticum aestivum G... [more]
GSTF5_ARATH2.102e-1235.88Glutathione S-transferase PM239X14 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834174 ID=CF834174; Name=CF834174; organism=Citrus sinensis; type=EST; length=722bp
TTTTTTTTTTTTTTTTACGCAGAATATCTCCCCCTTTGTTTTATTAGGGG
ACATAGATAAAATAAAAACCTCCCGCCATCAACATCAAAGTTGAATATGA
GGCAGTGCTGTTGAAATACAAAAGCGGTAGTACAAACTACAAAGCATCCA
TATTCTGCAGAATATTGATGACAAACGCCAAACAAGAGAATACGAACTCG
AAAACCAGCCTAATAGGTATTACAAAAGATAAGTGACCACCGAGGAGCGA
CTAACGTCTAGTAGGTAGCGGGCAGAGTGTTCAGTGTTTGAGCAAGGCAA
GGACCTTAGCCCAAGCCGGTCTGGAAGTGATATCAGCTGCCCATGCGCTA
ACATGGGGGCGTGCATCAAACAGCTTCTTGACAGGCGTCCCCAACAACAA
ATTAATATTGGGGAGATGATGCAAATCGACCAAGGGGAAGCTGTCGCACG
CCAAGTATTTGGACTGAGACAAACGGGCCTCGTAAACATCTAAAATTTTG
GCAAGCTTAGCTTCATTTTCTTCAACCGCAGCTGGATCAGTGGTCATTCC
AAACATTGGCTTGTACACGAGCTCCCAGTTGAGCTTCGATGATGGGGGGT
CGAACTGGAGTGCCTCCACCTCCTTCCATACCAATAACGGGGCGATGGGC
TTGCCTGGGCATGTTAACTGGGTGCCTTTGTCTGGAAACTCCTGGGCGAT
GTATTGGGTGATTGCCCTTGAT
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