CF834177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_CANTR (40S ribosomal protein S0 OS=Candida tropicalis GN=RPS0 PE=3 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.283e-60 Identity = 116/202 (57.43%), Postives = 142/202 (70.30%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYR 687 P D +++LA VHLG+KN + YV+K R DG+ IIN+GKTWEK+ +AAR+I AI N D+ V S+R +GQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WLLAR VL+ RG I +W VM DL+FYR Sbjct: 4 PASFDLTPEDAKLLLAGNVHLGSKNVQVHNKPYVYKTRPDGVNIINIGKTWEKIVLAARIIAAIPNANDVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLLAREVLRSRGIIPDRTTEWSVMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_KLULA (40S ribosomal protein S0 OS=Kluyveromyces lactis GN=RPS0 PE=3 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.622e-59 Identity = 112/202 (55.45%), Postives = 143/202 (70.79%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYR 687 P D Q++LAA VHLG KN E YV+K R DG+ +IN+GKTWEK+ +AAR+I AI NP D++ S+R YGQRAVLK+A +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKE++ NIP IA D DSP YVD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 4 PSTFDLTSEDAQLLLAARVHLGAKNVQVHQEPYVYKARPDGVNVINVGKTWEKIVLAARIIAAIPNPEDVVAISSRTYGQRAVLKYAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKESSYVNIPVIALTDLDSPSEYVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALPDRTQPWAIMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_PICGU (40S ribosomal protein S0 OS=Pichia guilliermondii GN=RPS0 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 2.119e-59 Identity = 116/202 (57.43%), Postives = 142/202 (70.30%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYR 687 P D +++LAA VHLG+KN + YV+K R DG+ +IN+GKTWEK+ +AAR I AI N D+ V S+R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+I+TDPRTD Q IKE++ NIP IA D DSP YVDI IP NNKGKHSIG ++WLLAR VL++RG I +W VM DL+FYR Sbjct: 4 PASFDLTAEDAKLLLAANVHLGSKNVIVHNKPYVYKTRPDGVNVINIGKTWEKIVLAARTIAAIPNAADVAVCSSRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVIVTDPRTDAQAIKESSYVNIPVIALTDMDSPTDYVDIAIPCNNKGKHSIGLIWWLLAREVLRLRGIIPDRSTEWSVMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_DEBHA (40S ribosomal protein S0 OS=Debaryomyces hansenii GN=RPS0 PE=3 SV=3) HSP 1 Score: 228.409 bits (581), Expect = 2.767e-59 Identity = 112/193 (58.03%), Postives = 141/193 (73.06%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRP-GHKWDVMVDLFFYR 687 D +++LAA VHLG+KN + YV+K R DG+ +IN+GKTWEK+ +AAR+I AI N D+ V S R +GQRAVLKFA +T A IAGR TPG FTN + SF EPRL+++TDPRTD Q IKE++ NIP IA D DSP YVD+ IP NNKGKHSIG ++WL+AR VL++RG I +W VM DL+FYR Sbjct: 13 DAKLLLAANVHLGSKNVQVHNKPYVYKTRPDGVNVINVGKTWEKIVLAARIIAAIPNAADVAVCSTRTFGQRAVLKFAAHTGATPIAGRFTPGNFTNYITRSFKEPRLVVVTDPRTDFQAIKESSYVNIPVIALTDMDSPSEYVDVAIPCNNKGKHSIGLIWWLVAREVLRLRGIIPDRTTEWSVMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAST (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae GN=RPS0B PE=1 SV=2) HSP 1 Score: 228.409 bits (581), Expect = 2.767e-59 Identity = 111/193 (57.51%), Postives = 140/193 (72.54%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 687 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAS7 (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS0B PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.767e-59 Identity = 111/193 (57.51%), Postives = 140/193 (72.54%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 687 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA2_YEAS1 (40S ribosomal protein S0-B OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS0B PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.767e-59 Identity = 111/193 (57.51%), Postives = 140/193 (72.54%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 687 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R YGQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTYGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRLDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAST (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae GN=RPS0A PE=1 SV=3) HSP 1 Score: 227.639 bits (579), Expect = 4.721e-59 Identity = 110/193 (56.99%), Postives = 141/193 (73.06%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 687 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS7 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain YJM789) GN=RPS0A PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.721e-59 Identity = 110/193 (56.99%), Postives = 141/193 (73.06%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 687 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYR 205
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA1_YEAS1 (40S ribosomal protein S0-A OS=Saccharomyces cerevisiae (strain RM11-1a) GN=RPS0A PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.721e-59 Identity = 110/193 (56.99%), Postives = 141/193 (73.06%), Query Frame = 1 Query: 112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGT-IRPGHKWDVMVDLFFYR 687 D Q++LAA HLG +N E YVF R DG+++IN+GKTWEKL +AAR+I AI NP D++ S+R +GQRAVLKFA +T A IAGR TPG+FTN + SF EPRL+I+TDPR+D Q IKEA+ NIP IA D DSP +VD+ IP NN+GKHSIG +++LLAR VL++RG + W +M DL+FYR Sbjct: 13 DAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRSDAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIWYLLAREVLRLRGALVDRTQPWSIMPDLYFYR 205 The following BLAST results are available for this feature:
BLAST of CF834177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834177 ID=CF834177; Name=CF834177; organism=Citrus sinensis; type=EST; length=687bpback to top |