CF834177

Overview
NameCF834177
Unique NameCF834177
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length687
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_ORNPR (40S ribosomal protein SA OS=Ornithodoros parkeri PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.729e-69
Identity = 122/198 (61.62%), Postives = 154/198 (77.78%), Query Frame = 1
Query:   94 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687
            L  K+ D++  L A+ H+GT   DFQM++Y FKRR+DG+Y+I+L KTWEKL +AAR IVAIENP ++   S+RPYGQRAVLKFA +T A  IAGR TPGTFTNQ+Q +F EPRLL++ DPR DHQP+ EA+  NIP IAFC+TD+ +RYVD+ IP NNK +HSIG ++W+L R VL+MRG+I     WD MVDLFFYR
Sbjct:    8 LGLKDDDVRRFLTAKTHIGTAQLDFQMQQYCFKRRSDGVYLIDLKKTWEKLLLAARAIVAIENPAEVCAISSRPYGQRAVLKFASFTGATPIAGRFTPGTFTNQIQAAFREPRLLVVCDPREDHQPVTEASYVNIPVIAFCNTDACLRYVDVAIPCNNKAQHSIGLMWWMLTREVLRMRGSIIREIPWDTMVDLFFYR 205          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_MAGGR (40S ribosomal protein S0 OS=Magnaporthe grisea GN=RPS0 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.950e-69
Identity = 124/205 (60.49%), Postives = 156/205 (76.10%), Query Frame = 1
Query:   76 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 687
            A  P   +    DI+M+LAA+ H+G+KN    M  Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN +  SF EPRL+++TDPRTD Q IKEA+  NIP IA CDTDSP  YVD+ IP NNKG+H+IGC++W+LAR VL++RGTI      WDVMVDL+FYR
Sbjct:    4 ANLPSVFNATSQDIEMLLAAQSHIGSKNLQVHMAPYLWKTRQDGVNVINVGKTWEKIVLAARIITAIDNPADVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHAIGCIWWMLAREVLRLRGTIYNRETPWDVMVDLYFYR 208          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_AJECG (40S ribosomal protein S0 OS=Ajellomyces capsulata (strain ATCC 26029 / G186AR / H82 / RMSCC 2432) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 8.583e-69
Identity = 124/202 (61.39%), Postives = 156/202 (77.23%), Query Frame = 1
Query:   85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687
            P   +    DI+M+LAA+ HLG+KN    ME Y++K R DGI +IN+GKTWEK+ +AAR+I A++NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTDHQ IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+     +WDV+VDL+FYR
Sbjct:    7 PPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAVDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLASRETEWDVVVDLYFYR 208          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_SUBDO (40S ribosomal protein SA OS=Suberites domuncula PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.121e-68
Identity = 124/198 (62.63%), Postives = 153/198 (77.27%), Query Frame = 1
Query:   94 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687
            LS KE D+  +LAA  HLG  N D QM +YVFK + DG+ IIN+ KTWEKL +AARVI AIENP D+ V + +P+GQRA+LKFA YT A  IAGR TPGTFTNQ+Q +F EPRLLI++D R+DHQPI EAA  NIP IAFC+T+SP+RY+D+ IP NN GK+S+G ++WLL R VL++RGTI     W+VM DLFFYR
Sbjct:    8 LSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLLAARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPRLLIVSDARSDHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMWWLLCREVLRLRGTISRELPWEVMPDLFFYR 205          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_BOMMO (40S ribosomal protein SA OS=Bombyx mori PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.121e-68
Identity = 123/198 (62.12%), Postives = 152/198 (76.77%), Query Frame = 1
Query:   94 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687
            L+  E D+  MLAA  HLG +N +FQME YV+KRR DG ++INL +TWEKL +AAR +VAIENP D+ V S+RP+GQRAVLKFA +T A  IAGR TPG FTNQ+Q +F EPRLLI+ DP  DHQPI EA+  NIP IA C+TDSP+R+VDI IP N K  HSIG ++WLLAR VL++RG +    +WDV+V+LFFYR
Sbjct:    8 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLRGVLPRDQRWDVVVELFFYR 205          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_AJEDS (40S ribosomal protein S0 OS=Ajellomyces dermatitidis (strain SLH14081) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.121e-68
Identity = 123/193 (63.73%), Postives = 154/193 (79.79%), Query Frame = 1
Query:  112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687
            DI+M+LAA+ HLG+KN    M+ Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTDHQ IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGTI     +WDV+VDL+FYR
Sbjct:   16 DIEMLLAAQCHLGSKNLQVHMDPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFAAHTGAAAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTIASRETEWDVVVDLYFYR 208          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_AJEDR (40S ribosomal protein S0 OS=Ajellomyces dermatitidis (strain ER-3) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.121e-68
Identity = 123/193 (63.73%), Postives = 154/193 (79.79%), Query Frame = 1
Query:  112 DIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687
            DI+M+LAA+ HLG+KN    M+ Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG FTN +  SF EPRL+I+TDPRTDHQ IKEA+  NIP IA CDTDSP  +VD+ IP NNKG+H+IG ++W+LAR VL++RGTI     +WDV+VDL+FYR
Sbjct:   16 DIEMLLAAQCHLGSKNLQVHMDPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFAAHTGAAAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDHQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTIASRETEWDVVVDLYFYR 208          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_AEDAE (40S ribosomal protein SA OS=Aedes aegypti GN=AAEL008083 PE=2 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.464e-68
Identity = 124/198 (62.63%), Postives = 154/198 (77.78%), Query Frame = 1
Query:   94 LSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687
            L+ K+ D+  MLAA  H+G+ + +FQME YV+KRR DG++IINLG+TWEKL +AAR I +IE PG++   S+RPYGQRAVLKFA YT A   AGR TPG FTNQ+Q +F EPRLLI+TDP TDHQP+ EA+  NIP IAFC+TDSP+++VDI IP NNK  HSIG ++WLLAR VL++RG I    KWD+  DLFFYR
Sbjct:    8 LALKDDDVTKMLAATTHVGSTSVNFQMESYVYKRRPDGVHIINLGRTWEKLLLAARCIASIEYPGEVFAISSRPYGQRAVLKFAHYTEATPTAGRFTPGAFTNQIQPAFREPRLLIVTDPLTDHQPVTEASYVNIPVIAFCNTDSPLKFVDIAIPCNNKSPHSIGLMWWLLAREVLRLRGKI-THDKWDIKPDLFFYR 204          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA2_SCHJY (40S ribosomal protein S0-B OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps0b PE=3 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.464e-68
Identity = 123/201 (61.19%), Postives = 153/201 (76.12%), Query Frame = 1
Query:   85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687
            P  L+  E DI+ +LAA  H+G+KN D +ME YV+KRR DG+ IIN+GKTWEK+ +AARVI  IENP D+ V SARPYG RAVLKFA +T A AIAGR TPG FTN +  ++ EPRL+++TDPR DHQ IKEA+  NIP IA CDTDSP+ +VDI IP NNKG  SIG ++WLLAR VL++RG +     WD+MVD++FYR
Sbjct:    8 PSVLNATEEDIKQLLAASCHIGSKNLDVRMENYVWKRRADGVNIINIGKTWEKIVLAARVIATIENPADVCVISARPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIVVTDPRADHQAIKEASYVNIPVIALCDTDSPLAHVDIAIPTNNKGYKSIGLVWWLLAREVLRLRGALSRTAPWDIMVDMYFYR 208          
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_NECH7 (40S ribosomal protein S0 OS=Nectria haematococca (strain 77-13-4 / FGSC 9596 / MPVI) GN=RPS0 PE=3 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 1.912e-68
Identity = 123/202 (60.89%), Postives = 155/202 (76.73%), Query Frame = 1
Query:   85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687
            P   +    DI+M+LAA+ HLG+KN    ME Y++K R DG+ ++N+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN +  SF EPRL+++TDPRTD Q IKEA+  NIP IA  DTDSP  YVD+ IP NNKG+H+IGC++W+LAR VL++RGTI      WDVMVDL+FYR
Sbjct:    7 PSVFNATSQDIEMLLAAQCHLGSKNLQVHMENYLWKTRADGVNVLNVGKTWEKIVLAARIIAAIDNPADVCVISARPYGQRAVLKFASHTGATAIAGRFTPGSFTNYITRSFKEPRLIVVTDPRTDAQAIKEASYVNIPVIALTDTDSPTEYVDVAIPTNNKGRHAIGCVWWMLAREVLRLRGTIYSRETPWDVMVDLYFYR 208          
The following BLAST results are available for this feature:
BLAST of CF834177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 199
Match NameE-valueIdentityDescription
RSSA_ORNPR1.729e-6961.6240S ribosomal protein SA OS=Ornithodoros parkeri P... [more]
RSSA_MAGGR2.950e-6960.4940S ribosomal protein S0 OS=Magnaporthe grisea GN=... [more]
RSSA_AJECG8.583e-6961.3940S ribosomal protein S0 OS=Ajellomyces capsulata ... [more]
RSSA_SUBDO1.121e-6862.6340S ribosomal protein SA OS=Suberites domuncula PE... [more]
RSSA_BOMMO1.121e-6862.1240S ribosomal protein SA OS=Bombyx mori PE=2 SV=1[more]
RSSA_AJEDS1.121e-6863.7340S ribosomal protein S0 OS=Ajellomyces dermatitid... [more]
RSSA_AJEDR1.121e-6863.7340S ribosomal protein S0 OS=Ajellomyces dermatitid... [more]
RSSA_AEDAE1.464e-6862.6340S ribosomal protein SA OS=Aedes aegypti GN=AAEL0... [more]
RSSA2_SCHJY1.464e-6861.1940S ribosomal protein S0-B OS=Schizosaccharomyces ... [more]
RSSA_NECH71.912e-6860.8940S ribosomal protein S0 OS=Nectria haematococca (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B04_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834177 ID=CF834177; Name=CF834177; organism=Citrus sinensis; type=EST; length=687bp
CAGAAGTCTCTCTCTAAGAGGCNAGTCTCAGNTTTCTCTCGCAGGTTTTA
ACCCCTAAAGATGGCGACCGGAACAGCAACGGCCCCGAGGCAGCTCTCTC
AGAAAGAGGCTGACATTCAGATGATGTTAGCCGCCGAAGTTCATTTGGGT
ACTAAGAACTGTGACTTCCAAATGGAACGTTACGTGTTCAAGCGCCGAAA
CGATGGAATTTATATTATCAATCTTGGTAAGACTTGGGAGAAGCTACAGA
TGGCGGCCAGGGTTATCGTAGCCATTGAAAACCCTGGGGACATTATTGTC
CAATCAGCTAGACCCTATGGACAGCGAGCTGTGTTGAAGTTTGCAAAGTA
CACTCACGCCCATGCCATTGCTGGCAGGCACACTCCTGGTACATTTACCA
ATCAAATGCAAACATCATTCAATGAGCCCCGACTTCTCATTCTAACAGAT
CCACGAACAGACCATCAGCCAATTAAGGAAGCTGCCCTTGGAAACATTCC
CACCATTGCCTTTTGTGACACTGACTCACCTATGCGTTATGTTGATATTG
GCATTCCTGCCAATAACAAGGGCAAACACAGCATTGGGTGTCTCTTCTGG
CTTTTGGCTAGAATGGTTCTCCAGATGCGCGGCACTATTCGTCCTGGCCA
CAAGTGGGATGTGATGGTCGATCTGTTCTTCTACAGG
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