CF834177
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_COCIM (40S ribosomal protein S0 OS=Coccidioides immitis GN=RPS0 PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.563e-68 Identity = 125/202 (61.88%), Postives = 156/202 (77.23%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687 P + DI+M+LAA+ HLG+KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 7 PPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA1_SCHJY (40S ribosomal protein S0-A OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rps0a PE=3 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 5.563e-68 Identity = 123/204 (60.29%), Postives = 155/204 (75.98%), Query Frame = 1 Query: 76 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYR 687 A P L+ + DI+ +LAA H+G+KN D +ME YV+KRR+DG++IIN+GKTWEK+ +AARVI IENP D+ V S+RPYG RAVLKFA +T A AIAGR TPG FTN + ++ EPRL+I TDPR D Q IKEA+ NIP I+ CDTDSP+ +VD+ IP NNKG SIG ++WLLAR VL++RGTI WDVMVD++FYR Sbjct: 4 AGRPSILNATDDDIKQLLAASCHIGSKNLDVRMENYVWKRRSDGVHIINIGKTWEKIVLAARVIATIENPADVCVVSSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIATDPRADAQAIKEASYVNIPVISLCDTDSPLAHVDVAIPTNNKGYKSIGLVWWLLAREVLRLRGTISRTSPWDVMVDMYFYR 207
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_UNCRE (40S ribosomal protein S0 OS=Uncinocarpus reesii (strain UAMH 1704) GN=RPS0 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 9.490e-68 Identity = 124/202 (61.39%), Postives = 156/202 (77.23%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687 P + D++M+LAA+ HLG+KN M+ Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP YVD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 7 PPVFNATSQDMEMLLAAQCHLGSKNLQVHMDPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLATRETEWDVVVDLYFYR 208
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_PHANO (40S ribosomal protein S0 OS=Phaeosphaeria nodorum GN=RPS0 PE=3 SV=2) HSP 1 Score: 256.529 bits (654), Expect = 9.490e-68 Identity = 124/202 (61.39%), Postives = 154/202 (76.24%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687 P + + DI+M+LAA+ HLG KN ME Y++K R DG+ +IN+GKTWEK+ +AAR+IVAI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CD DSP YVD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDVM DL+FYR Sbjct: 7 PAIFNPSQQDIEMLLAAQCHLGAKNLQVHMEPYLWKTRPDGVNVINVGKTWEKIVLAARIIVAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDGDSPTEYVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLASREAEWDVMTDLYFYR 208
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_PARBP (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain Pb03) GN=RPS0 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 9.490e-68 Identity = 124/202 (61.39%), Postives = 155/202 (76.73%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 687 P + DI+M+LAA+ HLG+KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR Sbjct: 7 PPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRESEWDVVVDLYFYR 208
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_PARBD (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain Pb18) GN=RPS0 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 9.490e-68 Identity = 124/202 (61.39%), Postives = 155/202 (76.73%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687 P + DI+M+LAA+ HLG+KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR Sbjct: 7 PPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_PARBA (40S ribosomal protein S0 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=RPS0 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 9.490e-68 Identity = 124/202 (61.39%), Postives = 155/202 (76.73%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687 P + DI+M+LAA+ HLG+KN ME Y++K R DGI +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDV+VDL+FYR Sbjct: 7 PPVFNATSQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGINVINIGKTWEKIVLAARIIAAIDNPADICVISARPYGQRAVLKFAAHTGAVAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEFVDVAIPTNNKGRHAIGLIWWMLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_ASPCL (40S ribosomal protein S0 OS=Aspergillus clavatus GN=rps0 PE=3 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 9.490e-68 Identity = 124/202 (61.39%), Postives = 155/202 (76.73%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687 P + DI+M+LAA+ HLG+KN ME Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP +VD+ IP NNKG+H+IG ++WLLAR VL++RGT+ +WDV+VDL+FYR Sbjct: 7 PPMFNPTPQDIEMLLAAQCHLGSKNLQVHMEPYLWKTRPDGVNVINIGKTWEKILLAARIIAAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFKEPRLIIVTDPRTDAQAIKEASYVNIPVIALCDTDSPTDFVDVAIPTNNKGRHAIGLVWWLLAREVLRLRGTLANRETEWDVVVDLYFYR 208
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_PYRTR (40S ribosomal protein S0 OS=Pyrenophora tritici-repentis (strain Pt-1C-BFP) GN=rps0 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.619e-67 Identity = 123/202 (60.89%), Postives = 154/202 (76.24%), Query Frame = 1 Query: 85 PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRPGH-KWDVMVDLFFYR 687 P + + DI+M+LAA+ HLG KN ME Y++K R DG+ ++N+GKTWEK+ +AAR+IVAI+NP DI V SARPYGQRAVLKFA +T A AIAGR TPG FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CD DSP YVD+ IP NNKG+H+IG ++W+LAR VL++RGT+ +WDVM DL+FYR Sbjct: 7 PAIFNPTQQDIEMLLAAQCHLGAKNLQVHMEPYLWKTRPDGVNVLNIGKTWEKIVLAARIIVAIDNPADICVISARPYGQRAVLKFASHTGATAIAGRFTPGNFTNYITRSFREPRLVIVTDPRTDAQAIKEASYVNIPVIALCDGDSPTEYVDVAIPTNNKGRHAIGLVWWMLAREVLRLRGTLANRETEWDVMTDLYFYR 208
BLAST of CF834177 vs. ExPASy Swiss-Prot
Match: RSSA_CHAGB (40S ribosomal protein S0 OS=Chaetomium globosum GN=RPS0 PE=3 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.619e-67 Identity = 123/205 (60.00%), Postives = 154/205 (75.12%), Query Frame = 1 Query: 76 ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVAIENPGDIIVQSARPYGQRAVLKFAKYTHAHAIAGRHTPGTFTNQMQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI-RPGHKWDVMVDLFFYR 687 A P + DI+ +LAA+ H+G+KN M+ Y++K R DG+ +IN+GKTWEK+ +AAR+I AI+NP D+ V SARPYGQRAVLKFA +T A AIAGR TPG+FTN + SF EPRL+I+TDPRTD Q IKEA+ NIP IA CDTDSP YVD+ IP NNKG+HSIG ++W+LAR VL++RGTI WDVM DL+FYR Sbjct: 4 ANLPSIFNATSTDIEQLLAAQCHVGSKNLGVNMQPYLWKTRADGVNVINIGKTWEKITLAARIIAAIDNPSDVCVISARPYGQRAVLKFAAHTGAQAIAGRFTPGSFTNYITRSFKEPRLIIVTDPRTDSQAIKEASYVNIPVIALCDTDSPTEYVDVAIPTNNKGRHSIGLVWWMLAREVLRLRGTIYNRETPWDVMPDLYFYR 208 The following BLAST results are available for this feature:
BLAST of CF834177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 199
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834177 ID=CF834177; Name=CF834177; organism=Citrus sinensis; type=EST; length=687bpback to top |