CF834179

Overview
NameCF834179
Unique NameCF834179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_ACIB3 (Peptide methionine sulfoxide reductase msrA OS=Acinetobacter baumannii (strain AB307-0294) GN=msrA PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 1.843e-30
Identity = 63/133 (47.37%), Postives = 90/133 (67.67%), Query Frame = 2
Query:    5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGF 403
            ++ GV K   GY+ G+  +P+YE VC G T H EVV + +D ++ ++  LLD+F+A HDPT LNRQGND+GTQYRS IY++  EQ++AA+ +++   K  +  IVTE+ PA  FY AE+YHQ Y  K    G+
Sbjct:   20 QIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHTIQ-TLKDDDLDIVTELSPAPTFYPAEDYHQNYYEKNPSQGY 151          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_RHOCS (Peptide methionine sulfoxide reductase msrA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=msrA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.407e-30
Identity = 69/131 (52.67%), Postives = 82/131 (62.60%), Query Frame = 2
Query:    5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK----IVTEILPAKKFYRAEEYHQQYLAK 385
            +VPGV  T  GY+ G   NP+YE+VC+G T H EVV V YDP   S+  LL +FW  HDPT   RQGNDVGTQYRS IY  TPEQ + A+ S +     L  +    + TEI  A  FY AE+YHQQYL K
Sbjct:   65 QVPGVYSTAAGYAGGPTPNPTYEEVCTGRTGHAEVVLVVYDPATVSYAELLKVFWENHDPTQGMRQGNDVGTQYRSAIYATTPEQLRLAEASRDSYASRLKAQGYGAVTTEIREAPAFYYAEDYHQQYLHK 195          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_DEIRA (Peptide methionine sulfoxide reductase msrA OS=Deinococcus radiodurans GN=msrA PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.407e-30
Identity = 66/123 (53.66%), Postives = 80/123 (65.04%), Query Frame = 2
Query:   14 GVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLER--QQKVLNRKIVTEILPAKKFYRAEEYHQQY 376
            GV K E GY  G + NP Y  VC G T H E VRV +DP + S+  LL +F+A HDPT LNRQG DVGTQYRS ++  T EQE+ A+E +E+   + V  R IVT I PA  FY AE+YHQ Y
Sbjct:   54 GVQKVESGYIGGTVPNPDYRSVCGGQTGHAEAVRVTFDPNQISYRDLLGLFFATHDPTSLNRQGADVGTQYRSALFPLTQEQEQTAREMIEQLGTEDVFGRPIVTSIEPASTFYVAEDYHQNY 176          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_SULAC (Peptide methionine sulfoxide reductase msrA OS=Sulfolobus acidocaldarius GN=msrA PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.143e-30
Identity = 59/128 (46.09%), Postives = 90/128 (70.31%), Query Frame = 2
Query:    2 RRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 385
            +RV GV   + GYS G + NP+YE+VC+  T H EVV++ +DP   ++  LL++F+  HDPT  NRQGNDVG+QYRS I +++ EQ+K A+E ++  ++ L +K+VTE++P + FY AE+YH  +  K
Sbjct:   19 KRVKGVVSVKPGYSGGKVPNPTYEEVCTDETGHAEVVQITFDPSVITYRELLEIFFEIHDPTTPNRQGNDVGSQYRSIILYHSEEQKKIAEEMIKLYERKLGKKVVTELVPFEAFYEAEDYHHDFYDK 146          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_SCHPO (Probable peptide methionine sulfoxide reductase OS=Schizosaccharomyces pombe GN=SPAC29E6.05c PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 4.105e-30
Identity = 61/125 (48.80%), Postives = 87/125 (69.60%), Query Frame = 2
Query:   17 VTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQ--KVLNRKIVTEILPAKKFYRAEEYHQQYLAK 385
            + KT VGY+ G   +P+Y++VC+ TTNH E +++++D K  S+D +++ F+A HDPT  N+QGND+GTQYRS I+   PEQ   AK  +   Q     N+KIVT+ILPA K++ AE+YHQ YL K
Sbjct:   28 ILKTSVGYTGGITADPTYKEVCTNTTNHAEALKIEFDEKLTSYDKIIEFFFAMHDPTTSNQQGNDIGTQYRSAIFTTNPEQATIAKRVMNEVQAKHYPNKKIVTQILPAGKWWDAEDYHQLYLEK 152          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_BOVIN (Peptide methionine sulfoxide reductase OS=Bos taurus GN=MSRA PE=1 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.362e-30
Identity = 67/128 (52.34%), Postives = 85/128 (66.41%), Query Frame = 2
Query:   14 GVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK----IVTEILPAKKFYRAEEYHQQYLAK 385
            GV  T+VG++ GY  NP+Y++VCSG T H EVVRV + P+  SF+ LL +FW  HDPT   RQGND G+QYRS IY  + E   AA +S E  QKVL+      I T+I   + FY AE+YHQQYL+K
Sbjct:   85 GVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFWENHDPTQGMRQGNDHGSQYRSAIYPTSAEHVGAALKSKEDYQKVLSEHGFGLITTDIREGQTFYYAEDYHQQYLSK 212          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_ACIBT (Peptide methionine sulfoxide reductase msrA OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=msrA PE=3 SV=2)

HSP 1 Score: 130.954 bits (328), Expect = 5.362e-30
Identity = 62/133 (46.62%), Postives = 89/133 (66.92%), Query Frame = 2
Query:    5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGF 403
            ++ GV K   GY+ G+  +P+YE VC G T H EVV + +D ++ ++  LLD+F+A HDPT LNRQGND+GTQYRS IY++  EQ++AA+ +++   K  +  IVTE+ P   FY AE+YHQ Y  K    G+
Sbjct:   20 QIRGVEKVTSGYAGGHTTHPTYEQVCQGDTQHAEVVLIDFDEQQVTYSQLLDVFFATHDPTTLNRQGNDIGTQYRSVIYYFNEEQKQAAEHTIQ-TLKDDDLDIVTELSPTPTFYPAEDYHQNYYEKNPSQGY 151          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_PSE14 (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=msrA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.003e-30
Identity = 69/128 (53.91%), Postives = 83/128 (64.84%), Query Frame = 2
Query:   14 GVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEILPAKKFYRAEEYHQQYLAK 385
            GV  T VGY+ G+  NP+YE+VCSG T H EVV V Y+P++ S+ +LL +FW  H+PT   RQGND+GTQYRS IY  TP+Q  AAK S    Q  L +     I TEI  A   Y AE YHQQYLAK
Sbjct:   71 GVVSTVVGYAGGFTPNPTYEEVCSGLTAHTEVVLVVYEPEKISYKSLLKVFWEAHNPTQGMRQGNDIGTQYRSVIYCTTPKQLDAAKASAAEFQAELRKAGLGAITTEIEEAPTVYFAEAYHQQYLAK 198          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_MOUSE (Peptide methionine sulfoxide reductase OS=Mus musculus GN=Msra PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 7.003e-30
Identity = 66/128 (51.56%), Postives = 85/128 (66.41%), Query Frame = 2
Query:   14 GVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEILPAKKFYRAEEYHQQYLAK 385
            GV  T+VG++ G+  NP+Y++VCS  T H EVVRV Y P+  SF+ LL +FW  HDPT   RQGND GTQYRS +Y  +  Q +AA  S E  QKVL++     I T+I   + FY AE+YHQQYL+K
Sbjct:   85 GVYSTQVGFAGGHTRNPTYKEVCSEKTGHAEVVRVVYRPEHISFEELLKVFWENHDPTQGMRQGNDFGTQYRSAVYPTSAVQMEAALRSKEEYQKVLSKHNFGPITTDIREGQVFYYAEDYHQQYLSK 212          
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_CLOBJ (Peptide methionine sulfoxide reductase msrA OS=Clostridium botulinum (strain Kyoto / Type A2) GN=msrA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.146e-30
Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 2
Query:    5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 385
            R+ G+ +T+VGY+ G   NPSYE+VCSG T H E   ++YD    S + LL+ FW+  DPT+LN+QGND GTQYR+ I++   +      +S  ++QK   + IVTE+ P K FY AEEYHQ+YL K
Sbjct:   20 RIEGIVETKVGYANGIKENPSYEEVCSGVTGHAEACYIKYDESIISLEELLNKFWSIIDPTVLNKQGNDRGTQYRTCIFYLDEKDLNVIIKSKYQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKK 146          
The following BLAST results are available for this feature:
BLAST of CF834179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
MSRA_ACIB31.843e-3047.37Peptide methionine sulfoxide reductase msrA OS=Aci... [more]
MSRA_RHOCS2.407e-3052.67Peptide methionine sulfoxide reductase msrA OS=Rho... [more]
MSRA_DEIRA2.407e-3053.66Peptide methionine sulfoxide reductase msrA OS=Dei... [more]
MSRA_SULAC3.143e-3046.09Peptide methionine sulfoxide reductase msrA OS=Sul... [more]
MSRA_SCHPO4.105e-3048.80Probable peptide methionine sulfoxide reductase OS... [more]
MSRA_BOVIN5.362e-3052.34Peptide methionine sulfoxide reductase OS=Bos taur... [more]
MSRA_ACIBT5.362e-3046.62Peptide methionine sulfoxide reductase msrA OS=Aci... [more]
MSRA_PSE147.003e-3053.91Peptide methionine sulfoxide reductase msrA OS=Pse... [more]
MSRA_MOUSE7.003e-3051.56Peptide methionine sulfoxide reductase OS=Mus musc... [more]
MSRA_CLOBJ9.146e-3048.03Peptide methionine sulfoxide reductase msrA OS=Clo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05B05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834179 ID=CF834179; Name=CF834179; organism=Citrus sinensis; type=EST; length=647bp
CCGTAGAGTGCCAGGTGTCACCAAGACCGAAGTTGGGTACAGCCAAGGCT
ACTTGCATAACCCTAGCTACGAGGACGTGTGTAGTGGGACTACCAATCAT
AATGAAGTTGTTAGGGTTCAGTATGATCCTAAGGAGTGTAGTTTCGATAC
TTTGCTTGATATGTTTTGGGCTCGCCATGATCCTACCATGCTTAATCGGC
AGGGTAATGATGTTGGAACACAGTACAGATCTGGAATTTATTTTTACACT
CCTGAGCAAGAGAAGGCAGCCAAGGAGTCCTTGGAGAGACAGCAGAAGGT
CTTGAACAGGAAAATTGTCACCGAAATCCTACCTGCCAAGAAGTTCTACC
GAGCTGAGGAATACCACCAGCAGTATCTTGCAAAAGGGGGTCGATTTGGA
TTCAAACAATCTACTGAGAAAGGCTGCAATGATCCTATCAGGTGCTATGG
CTAAATAGTACCCTGCTATTACAGTTAATTTTCAGCTTTTTTCTGAATCT
TAGCCATTATAACTTGTGTTCTTGCTATGATAAGAATGCCAGATGTATTT
AGTGTCTGAACTTGGGTATGTAACTAGTCATAGTCTCTTAAAACCATCAT
CTATATCTGTAATTTCACTGGTCATGTTTTTTAATGTTTATGTAAAG
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