CF834179
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_METM7 (Peptide methionine sulfoxide reductase msrA OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=msrA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.728e-32 Identity = 67/128 (52.34%), Postives = 85/128 (66.41%), Query Frame = 2 Query: 2 RRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 385 R V GV TEVGY G + NP+Y VC G + H EVV+V YD K ++D LL++FW HDPT NRQG DVG QY S I+++T EQ A++SLE+ Q ++ KIVT I A F+ AEEYHQ+Y K Sbjct: 22 RHVDGVISTEVGYMGGNVKNPTYGQVCRGKSGHIEVVKVSYDSKIITYDDLLELFWKNHDPTTPNRQGWDVGEQYSSHIFYFTDEQRIVAEKSLEKMQCYMDLKIVTAIKKASDFFPAEEYHQKYFMK 149
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_VIBCM (Peptide methionine sulfoxide reductase msrA OS=Vibrio cholerae serotype O1 (strain M66-2) GN=msrA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK----IVTEILPAKKFYRAEEYHQQYLAK 385 ++ GV T VGYS G+ NP+YE+VCSG T H EVVRV +DP+ LL FW RHDPT RQGND GTQYRS IY ++ +Q + A+ S Q +L + I TEILPA +Y AE YHQQYLAK Sbjct: 61 QLDGVISTSVGYSGGFTPNPTYEEVCSGKTGHTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSEDQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETYHQQYLAK 191
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_VIBCH (Peptide methionine sulfoxide reductase msrA OS=Vibrio cholerae GN=msrA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK----IVTEILPAKKFYRAEEYHQQYLAK 385 ++ GV T VGYS G+ NP+YE+VCSG T H EVVRV +DP+ LL FW RHDPT RQGND GTQYRS IY ++ +Q + A+ S Q +L + I TEILPA +Y AE YHQQYLAK Sbjct: 61 QLDGVISTSVGYSGGFTPNPTYEEVCSGKTGHTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSEDQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETYHQQYLAK 191
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_VIBC3 (Peptide methionine sulfoxide reductase msrA OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=msrA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 70/131 (53.44%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK----IVTEILPAKKFYRAEEYHQQYLAK 385 ++ GV T VGYS G+ NP+YE+VCSG T H EVVRV +DP+ LL FW RHDPT RQGND GTQYRS IY ++ +Q + A+ S Q +L + I TEILPA +Y AE YHQQYLAK Sbjct: 61 QLDGVISTSVGYSGGFTPNPTYEEVCSGKTGHTEVVRVIFDPERLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSEDQREIAEASKAAYQALLTAQHRPSITTEILPAGAYYFAETYHQQYLAK 191
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_SALTO (Peptide methionine sulfoxide reductase msrA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=msrA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 70/129 (54.26%), Postives = 85/129 (65.89%), Query Frame = 2 Query: 8 VPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEILPAKKFYRAEEYHQQYLA 382 +PGV T VGY+ GY NPSY++VCSG T H EVV V+YDP + +++ LL +FW HDPT RQGNDVGTQYRS IY T EQ A+ S + V+ R +I TEI P +Y AE YHQQYLA Sbjct: 65 LPGVLTTSVGYAGGYTPNPSYDEVCSGRTGHAEVVHVRYDPTKITYEDLLKVFWENHDPTQGMRQGNDVGTQYRSAIYPTTDEQLTTARASRDAFAPVVARAGKGEITTEISPLGDYYLAEGYHQQYLA 193
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_SALPB (Peptide methionine sulfoxide reductase msrA OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=msrA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.482e-32 Identity = 70/132 (53.03%), Postives = 83/132 (62.88%), Query Frame = 2 Query: 5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385 ++PGV T GY+ GY NP+Y +VCSG T H E VR+ YDP S++ LL +FW HDPT +QGND GTQYRS IY TPEQ AA S ER Q + +R I TEI A FY AE+ HQQYL K Sbjct: 62 QLPGVYSTAAGYAGGYTPNPTYREVCSGQTGHAEAVRIVYDPAVISYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASCERFQSAMAAAGDHRPITTEIAHATPFYYAEDEHQQYLHK 193
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_VIBPA (Peptide methionine sulfoxide reductase msrA OS=Vibrio parahaemolyticus GN=msrA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32 Identity = 69/131 (52.67%), Postives = 89/131 (67.94%), Query Frame = 2 Query: 5 RVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAA-KESLERQQKV---LNRKIVTEILPAKKFYRAEEYHQQYLAK 385 ++ GV T VGY+ G+ NP+YE+VC+G T H EVVRV +D + S LL +FW +HDPT RQGND+GTQYRS IY Y+ +Q++ A K L+ QQ + L I TEI+PA +Y AE YHQQYLAK Sbjct: 61 QLDGVVSTSVGYAGGFTPNPTYEEVCTGKTGHTEVVRVVFDERVISLAQLLAVFWEKHDPTQGMRQGNDLGTQYRSAIYTYSQDQQEIADKSKLQYQQALEAELRSTITTEIVPAGPYYFAETYHQQYLAK 191
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_STRGG (Peptide methionine sulfoxide reductase msrA OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=msrA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32 Identity = 75/137 (54.74%), Postives = 88/137 (64.23%), Query Frame = 2 Query: 14 GVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL----NRKIVTEILPA--KKFYRAEEYHQQYLAK--GGRFG 400 GV T VGY GY NPSYE+ CSG T H E VRV +DP S++ LL +FW H+PT RQGNDVGTQYRS IY ++P Q AA S QKVL +++I TEILPA + F+ AE YHQQYL K GG G Sbjct: 68 GVWTTLVGYQGGYTENPSYEEACSGLTGHTEAVRVVFDPAVVSYEELLKLFWESHNPTQGFRQGNDVGTQYRSAIYTHSPAQAAAADASRAAYQKVLTASGHQEITTEILPAEGRPFWPAEAYHQQYLDKNPGGYCG 204
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_METMA (Peptide methionine sulfoxide reductase msrA OS=Methanosarcina mazei GN=msrA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32 Identity = 67/132 (50.76%), Postives = 87/132 (65.91%), Query Frame = 2 Query: 2 RRVPGVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQK--VLNRKIVTEILPAKKFYRAEEYHQQYLAKGG 391 R++ GV T VGYS G+ P+YE VC+ T H E VRV +DP+ S+ TLLD+FW HDPT +RQG DVG QYRS I++++ EQ+ AA S E +K +VTEI+P +FY AE+YHQQY K G Sbjct: 69 RQIKGVVATAVGYSGGHFKRPTYEQVCTLDTGHAEAVRVIFDPEIVSYKTLLDVFWKIHDPTTKDRQGPDVGKQYRSVIFYHSDEQKAAALASKEELEKSGAFKNPVVTEIVPVSEFYMAEDYHQQYFEKKG 200
BLAST of CF834179 vs. ExPASy Swiss-Prot
Match: MSRA_ECO5E (Peptide methionine sulfoxide reductase msrA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=msrA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.771e-32 Identity = 70/129 (54.26%), Postives = 82/129 (63.57%), Query Frame = 2 Query: 14 GVTKTEVGYSQGYLHNPSYEDVCSGTTNHNEVVRVQYDPKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 385 GV T GY+ GY NP+Y +VCSG T H E VR+ YDP S++ LL +FW HDP RQGND GTQYRS IY TPEQ+ AA+ SLER Q + +R I TEI A FY AE+ HQQYL K Sbjct: 65 GVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAAMLAADDDRHITTEIANATPFYYAEDDHQQYLHK 193 The following BLAST results are available for this feature:
BLAST of CF834179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 315
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834179 ID=CF834179; Name=CF834179; organism=Citrus sinensis; type=EST; length=647bpback to top |