CF834180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_PSEA8 (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas aeruginosa (strain LESB58) GN=msrA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 47/90 (52.22%), Postives = 55/90 (61.11%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEILPAKKFYRAEEYHQQYLAK 629 P+E SF+ LL +FW HDPT RQG D+GTQYRS IY + Q+ AA S E Q L + +I TEI FY AE YHQQYLAK Sbjct: 109 PQETSFEQLLKVFWEAHDPTQGMRQGGDIGTQYRSVIYTFDAAQKAAALASRESFQAELAKAGYDRITTEIADVPPFYYAEAYHQQYLAK 198
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_ARTS2 (Peptide methionine sulfoxide reductase msrA OS=Arthrobacter sp. (strain FB24) GN=msrA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16 Identity = 42/88 (47.73%), Postives = 59/88 (67.05%), Query Frame = -2 Query: 348 DTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAKGGRFGFKQ 611 + +LDMF+A HDPT LNRQG DVGTQYRS +++ T E++ +E++ER Q + IVTE+ F+ AE++HQ Y AK G+ Q Sbjct: 67 EVILDMFFALHDPTTLNRQGYDVGTQYRSSMFYETTEEKILFEEAIERNQALWAHPIVTEVSRLPVFHVAEDFHQDYYAKHPEQGYCQ 154
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_CLOBH (Peptide methionine sulfoxide reductase msrA OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=msrA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = -2 Query: 372 SFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 617 S + LL+ FW+ DPT+LN+QGND GTQYR+GI++ + +S ++QK + IVTE+ P K FY AEEYHQ+YL K Sbjct: 65 SLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDEKDLNVIIKSKYQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKK 146
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_CLOB1 (Peptide methionine sulfoxide reductase msrA OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=msrA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = -2 Query: 372 SFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 617 S + LL+ FW+ DPT+LN+QGND GTQYR+GI++ + +S ++QK + IVTE+ P K FY AEEYHQ+YL K Sbjct: 65 SLEELLNKFWSIIDPTVLNKQGNDRGTQYRTGIFYLDEKDLNVIIKSKYQEQKNYRKPIVTEVEPLKCFYEAEEYHQKYLKK 146
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_SALSV (Peptide methionine sulfoxide reductase msrA OS=Salmonella schwarzengrund (strain CVM19633) GN=msrA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16 Identity = 47/91 (51.65%), Postives = 54/91 (59.34%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVL-----NRKIVTEILPAKKFYRAEEYHQQYLAK 629 P ++ LL +FW HDPT +QGND GTQYRS IY TPEQ AA S ER Q + +R I TEI A FY AE+ HQQYL K Sbjct: 103 PAVIRYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQSAAAHASRERFQSAMAAAGNHRPITTEITHATPFYYAEDEHQQYLHK 193
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_SALAI (Peptide methionine sulfoxide reductase msrA OS=Salinispora arenicola (strain CNS-205) GN=msrA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16 Identity = 46/89 (51.69%), Postives = 57/89 (64.04%), Query Frame = -2 Query: 375 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEILPAKKFYRAEEYHQQYLA 629 P + +++ LL +FW HDPT RQGNDVGTQYRS IY T EQ AA+ S + V+ R +I TEI P +Y AE+YHQQYLA Sbjct: 105 PTKIAYEDLLKVFWENHDPTQGMRQGNDVGTQYRSAIYTTTEEQLTAAQASRDAFAPVVARAGKGEITTEIGPLGDYYFAEDYHQQYLA 193
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_RHOCS (Peptide methionine sulfoxide reductase msrA OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=msrA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16 Identity = 46/90 (51.11%), Postives = 54/90 (60.00%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK----IVTEILPAKKFYRAEEYHQQYLAK 629 P S+ LL +FW HDPT RQGNDVGTQYRS IY TPEQ + A+ S + L + + TEI A FY AE+YHQQYL K Sbjct: 106 PATVSYAELLKVFWENHDPTQGMRQGNDVGTQYRSAIYATTPEQLRLAEASRDSYASRLKAQGYGAVTTEIREAPAFYYAEDYHQQYLHK 195
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_PSEMY (Peptide methionine sulfoxide reductase msrA OS=Pseudomonas mendocina (strain ymp) GN=msrA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16 Identity = 51/97 (52.58%), Postives = 58/97 (59.79%), Query Frame = -2 Query: 357 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNR----KIVTEILPAKKFYRAEEYHQQYLAK--GGRFG 629 P++ SFD LL +FW H+PT RQGND GTQYRS IY Q +AA S R Q L++ I TEI A FY AE YHQQYLAK GG G Sbjct: 109 PQQTSFDALLKVFWEAHNPTQGMRQGNDQGTQYRSAIYCQDHAQLEAALASQARFQAELDKAGLGSITTEICEAPIFYYAETYHQQYLAKNPGGYCG 205
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_BOVIN (Peptide methionine sulfoxide reductase OS=Bos taurus GN=MSRA PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16 Identity = 46/90 (51.11%), Postives = 57/90 (63.33%), Query Frame = -2 Query: 372 PKECSFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRK----IVTEILPAKKFYRAEEYHQQYLAK 629 P+ SF+ LL +FW HDPT RQGND G+QYRS IY + E AA +S E QKVL+ I T+I + FY AE+YHQQYL+K Sbjct: 123 PEHISFEELLKVFWENHDPTQGMRQGNDHGSQYRSAIYPTSAEHVGAALKSKEDYQKVLSEHGFGLITTDIREGQTFYYAEDYHQQYLSK 212
BLAST of CF834180 vs. ExPASy Swiss-Prot
Match: MSRA_ALKMQ (Peptide methionine sulfoxide reductase msrA OS=Alkaliphilus metalliredigens (strain QYMF) GN=msrA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16 Identity = 44/82 (53.66%), Postives = 54/82 (65.85%), Query Frame = -2 Query: 372 SFDTLLDMFWARHDPTMLNRQGNDVGTQYRSGIYFYTPEQEKAAKESLERQQKVLNRKIVTEILPAKKFYRAEEYHQQYLAK 617 S + LL+ FW DPT+ NRQG D+G+QYR+GIY+ E +S E QQK + IVTEI P K FY AEEYHQ+YL K Sbjct: 65 SLEILLNGFWKIIDPTVENRQGPDIGSQYRTGIYYGHEEDLDTIIKSKEMQQKKYDANIVTEIEPLKAFYDAEEYHQKYLKK 146 The following BLAST results are available for this feature:
BLAST of CF834180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 248
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834180 ID=CF834180; Name=CF834180; organism=Citrus sinensis; type=EST; length=630bpback to top |